Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:25:29 (796365): wrapper (7.7.26015): starting
20:25:29 (796365): wrapper: running run_atlas (--nthreads 12)
[2026-03-26 20:25:29] Arguments: --nthreads 12
[2026-03-26 20:25:29] Threads: 12
[2026-03-26 20:25:29] Checking for CVMFS
[2026-03-26 20:25:29] No cvmfs_config command found, will try listing directly
[2026-03-26 20:25:29] CVMFS is ok
[2026-03-26 20:25:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 20:25:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 20:25:29] Further information can be found at the LHC@home message board.
[2026-03-26 20:25:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 20:25:29] Checking for apptainer binary...
[2026-03-26 20:25:29] which: no apptainer in ((null))
[2026-03-26 20:25:29] apptainer is not installed, using version from CVMFS
[2026-03-26 20:25:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 20:25:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-26 20:25:29] apptainer works
[2026-03-26 20:25:29] Set ATHENA_PROC_NUMBER=12
[2026-03-26 20:25:29] Set ATHENA_CORE_NUMBER=12
[2026-03-26 20:25:29] Starting ATLAS job with PandaID=7058174687
[2026-03-26 20:25:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 21:24:52]  *** The last 200 lines of the pilot log: ***
[2026-03-26 21:24:52]  guid=d02d79c4-9bf6-46df-b787-df499a645afb
[2026-03-26 21:24:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-26 21:24:52]  is_altstaged=None
[2026-03-26 21:24:52]  is_tar=False
[2026-03-26 21:24:52]  lfn=log.49179329._000056.job.log.tgz.1
[2026-03-26 21:24:52]  mtime=0
[2026-03-26 21:24:52]  protocol_id=None
[2026-03-26 21:24:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-26 21:24:52]  replicas=None
[2026-03-26 21:24:52]  scope=mc23_13p6TeV
[2026-03-26 21:24:52]  status=None
[2026-03-26 21:24:52]  status_code=0
[2026-03-26 21:24:52]  storage_token=
[2026-03-26 21:24:52]  surl=/var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7058174687/log.49179329._000056.job.log.tgz.1
[2026-03-26 21:24:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/8f/log.49179329._000056.job.log.tgz.1
[2026-03-26 21:24:52]  workdir=None
[2026-03-26 21:24:52] ]
[2026-03-26 21:24:52] 2026-03-26 20:23:42,020 | INFO     | transferring file log.49179329._000056.job.log.tgz.1 from /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7058174687/log.49179329._000056.job.log.tgz.1 to /var/lib/
[2026-03-26 21:24:52] 2026-03-26 20:23:42,020 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7058174687/log.49179329._000056.job.log.tgz.1 /var/lib/boinc/var/slot144/slots/0/
[2026-03-26 21:24:52] 2026-03-26 20:23:42,037 | INFO     | adding to output.list: log.49179329._000056.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/8f/log.49179329._000056.job.log.tg
[2026-03-26 21:24:52] 2026-03-26 20:23:42,037 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-26 21:24:52] 2026-03-26 20:23:42,037 | INFO     | summary of transferred files:
[2026-03-26 21:24:52] 2026-03-26 20:23:42,038 | INFO     |  -- lfn=log.49179329._000056.job.log.tgz.1, status_code=0, status=transferred
[2026-03-26 21:24:52] 2026-03-26 20:23:42,038 | INFO     | stage-out finished correctly
[2026-03-26 21:24:52] 2026-03-26 20:23:42,454 | INFO     | time since job start (3481s) is within the limit (345600.0s)
[2026-03-26 21:24:52] 2026-03-26 20:23:43,448 | INFO     | monitor loop #259: job 0:7058174687 is in state 'finished'
[2026-03-26 21:24:52] 2026-03-26 20:23:43,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,459 | INFO     | time since job start (3483s) is within the limit (345600.0s)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,778 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-26 21:24:52] 2026-03-26 20:23:44,825 | INFO     | job 7058174687 has state=finished
[2026-03-26 21:24:52] 2026-03-26 20:23:44,825 | INFO     | preparing for final server update for job 7058174687 in state='finished'
[2026-03-26 21:24:52] 2026-03-26 20:23:44,825 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7058174687/jobReport.json
[2026-03-26 21:24:52] 2026-03-26 20:23:44,827 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/0/workernode_map.json
[2026-03-26 21:24:52] 2026-03-26 20:23:44,827 | INFO     | this job has now completed (state=finished)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,827 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,827 | INFO     | log transfer has been attempted: DONE
[2026-03-26 21:24:52] 2026-03-26 20:23:44,828 | INFO     | job 7058174687 has finished - writing final server update
[2026-03-26 21:24:52] 2026-03-26 20:23:44,828 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3127119/.job.ad'
[2026-03-26 21:24:52] 2026-03-26 20:23:44,828 | INFO     | total number of processed events: 400 (read)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,845 | INFO     | using path: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7058174687/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,846 | INFO     | extracted standard info from prmon json
[2026-03-26 21:24:52] 2026-03-26 20:23:44,846 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 21:24:52] 2026-03-26 20:23:44,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 21:24:52] 2026-03-26 20:23:44,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 21:24:52] 2026-03-26 20:23:44,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 21:24:52] 2026-03-26 20:23:44,847 | INFO     | fitting pss+swap vs Time
[2026-03-26 21:24:52] 2026-03-26 20:23:44,847 | INFO     | sum of square deviations: 38744912.5
[2026-03-26 21:24:52] 2026-03-26 20:23:44,847 | INFO     | sum of deviations: -712164935.0000001
[2026-03-26 21:24:52] 2026-03-26 20:23:44,847 | INFO     | mean x: 1774554961.5
[2026-03-26 21:24:52] 2026-03-26 20:23:44,847 | INFO     | mean y: 2756543.28
[2026-03-26 21:24:52] 2026-03-26 20:23:44,847 | INFO     | intersect: 32620608469.273514
[2026-03-26 21:24:52] 2026-03-26 20:23:44,847 | INFO     | chi2: 0.001037550844333819
[2026-03-26 21:24:52] 2026-03-26 20:23:44,847 | INFO     | current memory leak: -18.38 B/s (using 50 data points, chi2=0.00)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | could have reported an average CPU frequency of 3602 MHz (5 samples)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | ..............................
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | . Timing measurements:
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | . get job = 0 s
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | . initial setup = 4 s
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | . payload setup = 6 s
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | . stage-in = 0 s
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | . payload execution = 3459 s
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | . stage-out = 0 s
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | . log creation = 0 s
[2026-03-26 21:24:52] 2026-03-26 20:23:44,848 | INFO     | ..............................
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | 
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | job summary report
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | --------------------------------------------------
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | PanDA job id: 7058174687
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | task id: 49179329
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | errors: (none)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | pilot state: finished 
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | transexitcode: 0
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | exeerrorcode: 0
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | exeerrordiag: 
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | exitcode: 0
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | exitmsg: OK
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | cpuconsumptiontime: 38235 s
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | nevents: 400
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | neventsw: 0
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | pid: 806735
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | pgrp: 806735
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | corecount: 12
[2026-03-26 21:24:52] 2026-03-26 20:23:44,897 | INFO     | event service: False
[2026-03-26 21:24:52] 2026-03-26 20:23:44,898 | INFO     | sizes: {0: 2280323, 11: 2280323, 3469: 2306034, 3470: 2315056, 3473: 2315338}
[2026-03-26 21:24:52] 2026-03-26 20:23:44,898 | INFO     | --------------------------------------------------
[2026-03-26 21:24:52] 2026-03-26 20:23:44,898 | INFO     | 
[2026-03-26 21:24:52] 2026-03-26 20:23:44,898 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/0
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,919 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,919 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 21:24:52] 2026-03-26 20:23:44,919 | INFO     | job 7058174687 has completed (purged errors)
[2026-03-26 21:24:52] 2026-03-26 20:23:44,919 | INFO     | overall cleanup function is called
[2026-03-26 21:24:52] 2026-03-26 20:23:45,926 | INFO     | --- collectZombieJob: --- 10, [806735]
[2026-03-26 21:24:52] 2026-03-26 20:23:45,926 | INFO     | zombie collector waiting for pid 806735
[2026-03-26 21:24:52] 2026-03-26 20:23:45,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 21:24:52] 2026-03-26 20:23:45,927 | INFO     | collected zombie processes
[2026-03-26 21:24:52] 2026-03-26 20:23:45,927 | INFO     | will attempt to kill all subprocesses of pid=806735
[2026-03-26 21:24:52] 2026-03-26 20:23:46,297 | INFO     | process IDs to be killed: [806735] (in reverse order)
[2026-03-26 21:24:52] 2026-03-26 20:23:46,440 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 21:24:52] 2026-03-26 20:23:46,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 21:24:52] 2026-03-26 20:23:46,464 | INFO     | did not find any defunct processes belonging to 806735
[2026-03-26 21:24:52] 2026-03-26 20:23:46,486 | INFO     | did not find any defunct processes belonging to 806735
[2026-03-26 21:24:52] 2026-03-26 20:23:46,487 | INFO     | ready for new job
[2026-03-26 21:24:52] 2026-03-26 20:23:46,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 21:24:52] 2026-03-26 20:23:46,488 | INFO     | **************************************
[2026-03-26 21:24:52] 2026-03-26 20:23:46,488 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 21:24:52] 2026-03-26 20:23:46,488 | INFO     | **************************************
[2026-03-26 21:24:52] 2026-03-26 20:23:46,488 | INFO     | 
[2026-03-26 21:24:52] 2026-03-26 20:23:46,494 | INFO     | architecture information:
[2026-03-26 21:24:52] 2026-03-26 20:23:46,494 | INFO     | executing command: cat /etc/os-release
[2026-03-26 21:24:52] 2026-03-26 20:23:46,507 | INFO     | cat /etc/os-release:
[2026-03-26 21:24:52] NAME="CentOS Linux"
[2026-03-26 21:24:52] VERSION="7 (Core)"
[2026-03-26 21:24:52] ID="centos"
[2026-03-26 21:24:52] ID_LIKE="rhel fedora"
[2026-03-26 21:24:52] VERSION_ID="7"
[2026-03-26 21:24:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 21:24:52] ANSI_COLOR="0;31"
[2026-03-26 21:24:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 21:24:52] HOME_URL="https://www.centos.org/"
[2026-03-26 21:24:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 21:24:52] 
[2026-03-26 21:24:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 21:24:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 21:24:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 21:24:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 21:24:52] 
[2026-03-26 21:24:52] 2026-03-26 20:23:46,508 | INFO     | **************************************
[2026-03-26 21:24:52] 2026-03-26 20:23:47,011 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/0
[2026-03-26 21:24:52] 2026-03-26 20:23:47,027 | INFO     | sufficient remaining disk space (240120758272 B)
[2026-03-26 21:24:52] 2026-03-26 20:23:47,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 21:24:52] 2026-03-26 20:23:47,027 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 21:24:52] 2026-03-26 20:23:47,027 | INFO     | update_server=False
[2026-03-26 21:24:52] 2026-03-26 20:23:47,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 21:24:52] 2026-03-26 20:23:47,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 21:24:52] 2026-03-26 20:23:47,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 21:24:52] 2026-03-26 20:23:47,028 | INFO     | aborting loop
[2026-03-26 21:24:52] 2026-03-26 20:23:47,114 | INFO     | all job control threads have been joined
[2026-03-26 21:24:52] 2026-03-26 20:23:47,173 | INFO     | all data control threads have been joined
[2026-03-26 21:24:52] 2026-03-26 20:23:47,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 21:24:52] 2026-03-26 20:23:47,704 | INFO     | all payload control threads have been joined
[2026-03-26 21:24:52] 2026-03-26 20:23:48,028 | INFO     | [job] retrieve thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:48,033 | INFO     | [job] job monitor thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:48,117 | INFO     | [job] control thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:48,179 | INFO     | [data] control thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:48,290 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:48,709 | INFO     | [payload] control thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:48,724 | INFO     | [payload] validate_post thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:48,759 | INFO     | [job] validate thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:48,944 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:49,034 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:49,201 | INFO     | [payload] failed_post thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:49,239 | INFO     | [data] copytool_in thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:49,600 | INFO     | [data] copytool_out thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:49,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 21:24:52] 2026-03-26 20:23:50,911 | INFO     | [job] queue monitor thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:51,033 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:23:57,286 | INFO     | job.realtimelogging is not enabled
[2026-03-26 21:24:52] 2026-03-26 20:23:58,294 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 21:24:52] 2026-03-26 20:24:18,001 | INFO     | PID=800969 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-26 21:24:52] 2026-03-26 20:24:18,001 | INFO     | .. there are 15 such processes running
[2026-03-26 21:24:52] 2026-03-26 20:24:18,002 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 21:24:52] 2026-03-26 20:24:18,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 21:24:52] 2026-03-26 20:24:18,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 21:24:52] 2026-03-26 20:24:46,166 | INFO     | [monitor] cgroup control has ended
[2026-03-26 21:24:52] 2026-03-26 20:24:47,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23181694318400)>', '<ExcThread(monitor, started 23181456062208)>']
[2026-03-26 21:24:52] 2026-03-26 20:24:48,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 21:24:52] 2026-03-26 20:24:48,136 | INFO     | [monitor] control thread has ended
[2026-03-26 21:24:52] 2026-03-26 20:24:52,208 | INFO     | all workflow threads have been joined
[2026-03-26 21:24:52] 2026-03-26 20:24:52,208 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 21:24:52] 2026-03-26 20:24:52,208 | INFO     | traces error code: 0
[2026-03-26 21:24:52] 2026-03-26 20:24:52,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 21:24:52] 2026-03-26 20:24:52,347 [wrapper] ==== pilot stdout END ====
[2026-03-26 21:24:52] 2026-03-26 20:24:52,350 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 21:24:52] 2026-03-26 20:24:52,352 [wrapper] pilotpid: 800969
[2026-03-26 21:24:52] 2026-03-26 20:24:52,356 [wrapper] Pilot exit status: 0
[2026-03-26 21:24:52] 2026-03-26 20:24:52,365 [wrapper] pandaids: 7058174687
[2026-03-26 21:24:52] 2026-03-26 20:24:52,466 [wrapper] cleanup supervisor_pilot  985193 800970
[2026-03-26 21:24:52] 2026-03-26 20:24:52,469 [wrapper] Test setup, not cleaning
[2026-03-26 21:24:52] 2026-03-26 20:24:52,471 [wrapper] apfmon messages muted
[2026-03-26 21:24:52] 2026-03-26 20:24:52,474 [wrapper] ==== wrapper stdout END ====
[2026-03-26 21:24:52] 2026-03-26 20:24:52,476 [wrapper] ==== wrapper stderr END ====
[2026-03-26 21:24:52]  *** Error codes and diagnostics ***
[2026-03-26 21:24:52]     "exeErrorCode": 0,
[2026-03-26 21:24:52]     "exeErrorDiag": "",
[2026-03-26 21:24:52]     "pilotErrorCode": 0,
[2026-03-26 21:24:52]     "pilotErrorDiag": "",
[2026-03-26 21:24:52]  *** Listing of results directory ***
[2026-03-26 21:24:52] total 463392
[2026-03-26 21:24:52] -rwx------. 1 boinc boinc     36322 Mar 22 05:29 runpilot2-wrapper.sh
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc    585013 Mar 24 00:08 pilot3.tar.gz
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc      5111 Mar 24 00:16 queuedata.json
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc       100 Mar 26 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 21:24:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar 26 20:25 run_atlas
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc       105 Mar 26 20:25 job.xml
[2026-03-26 21:24:52] -rw-r--r--. 2 boinc boinc 237367289 Mar 26 20:25 EVNT.49131187._000003.pool.root.1
[2026-03-26 21:24:52] -rw-r--r--. 2 boinc boinc     15845 Mar 26 20:25 start_atlas.sh
[2026-03-26 21:24:52] drwxrwx--x. 2 boinc boinc      4096 Mar 26 20:25 shared
[2026-03-26 21:24:52] -rw-r--r--. 2 boinc boinc    597537 Mar 26 20:25 input.tar.gz
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc      6712 Mar 26 20:25 init_data.xml
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc         0 Mar 26 20:25 boinc_lockfile
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc      2618 Mar 26 20:25 pandaJob.out
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc   1012344 Mar 26 20:25 agis_schedconf.cvmfs.json
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc   1511579 Mar 26 20:25 agis_ddmendpoints.agis.ALL.json
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc       445 Mar 26 20:25 workernode_map.json
[2026-03-26 21:24:52] drwx------. 5 boinc boinc      4096 Mar 26 20:25 pilot3
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc 231412606 Mar 26 21:23 HITS.49179329._000056.pool.root.1
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc      1026 Mar 26 21:23 memory_monitor_summary.json
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc       529 Mar 26 21:23 boinc_task_state.xml
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc    362202 Mar 26 21:23 log.49179329._000056.job.log.tgz.1
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc      6344 Mar 26 21:23 heartbeat.json
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc        95 Mar 26 21:24 pilot_heartbeat.json
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc      8192 Mar 26 21:24 boinc_mmap_file
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc        27 Mar 26 21:24 wrapper_checkpoint.txt
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc      4902 Mar 26 21:24 pilotlog.txt
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc    530532 Mar 26 21:24 log.49179329._000056.job.log.1
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc       357 Mar 26 21:24 output.list
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc       620 Mar 26 21:24 runtime_log
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc    911360 Mar 26 21:24 result.tar.gz
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc       663 Mar 26 21:24 zanLDmTcPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDmih0LDmiT4t5n.diag
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc      9223 Mar 26 21:24 runtime_log.err
[2026-03-26 21:24:52] -rw-r--r--. 1 boinc boinc     21212 Mar 26 21:24 stderr.txt
[2026-03-26 21:24:52] HITS file was successfully produced:
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc 231412606 Mar 26 21:23 shared/HITS.pool.root.1
[2026-03-26 21:24:52]  *** Contents of shared directory: ***
[2026-03-26 21:24:52] total 459296
[2026-03-26 21:24:52] -rw-r--r--. 2 boinc boinc 237367289 Mar 26 20:25 ATLAS.root_0
[2026-03-26 21:24:52] -rw-r--r--. 2 boinc boinc     15845 Mar 26 20:25 start_atlas.sh
[2026-03-26 21:24:52] -rw-r--r--. 2 boinc boinc    597537 Mar 26 20:25 input.tar.gz
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc 231412606 Mar 26 21:23 HITS.pool.root.1
[2026-03-26 21:24:52] -rw-------. 1 boinc boinc    911360 Mar 26 21:24 result.tar.gz
21:24:53 (796365): run_atlas exited; CPU time 38359.034121
21:24:53 (796365): called boinc_finish(0)

</stderr_txt>
]]>

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