Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:12:17 (2319155): wrapper (7.7.26015): starting
10:12:17 (2319155): wrapper: running run_atlas (--nthreads 4)
[2026-03-26 10:12:17] Arguments: --nthreads 4
[2026-03-26 10:12:17] Threads: 4
[2026-03-26 10:12:17] Checking for CVMFS
[2026-03-26 10:12:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 10:12:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 10:12:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 10:12:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 10:12:19] 2.11.0.0 244521 5490 102260 157716 2 50 3297171 4096001 6454 130560 0 8972142 99.994 179562 1407 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-26 10:12:19] CVMFS is ok
[2026-03-26 10:12:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 10:12:19] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-26 10:12:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-26 10:12:19] Further information can be found at the LHC@home message board.
[2026-03-26 10:12:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 10:12:19] Checking for apptainer binary...
[2026-03-26 10:12:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 10:12:19] Running /usr/bin/apptainer --version
[2026-03-26 10:12:19] apptainer version 1.4.5
[2026-03-26 10:12:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 10:12:19] x32-linux2
[2026-03-26 10:12:19] apptainer works
[2026-03-26 10:12:19] Set ATHENA_PROC_NUMBER=4
[2026-03-26 10:12:19] Set ATHENA_CORE_NUMBER=4
[2026-03-26 10:12:19] Starting ATLAS job with PandaID=7057133113
[2026-03-26 10:12:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 13:34:59]  *** The last 200 lines of the pilot log: ***
[2026-03-26 13:34:59] 2026-03-26 17:33:57,022 | INFO     | this job has now completed (state=finished)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,022 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,022 | INFO     | log transfer has been attempted: DONE
[2026-03-26 13:34:59] 2026-03-26 17:33:57,022 | INFO     | job 7057133113 has finished - writing final server update
[2026-03-26 13:34:59] 2026-03-26 17:33:57,022 | INFO     | total number of processed events: 400 (read)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,027 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-7057133113/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,027 | INFO     | extracted standard info from prmon json
[2026-03-26 13:34:59] 2026-03-26 17:33:57,027 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 13:34:59] 2026-03-26 17:33:57,027 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 13:34:59] 2026-03-26 17:33:57,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 13:34:59] 2026-03-26 17:33:57,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 13:34:59] 2026-03-26 17:33:57,029 | INFO     | fitting pss+swap vs Time
[2026-03-26 13:34:59] 2026-03-26 17:33:57,030 | INFO     | sum of square deviations: 2406926989.5
[2026-03-26 13:34:59] 2026-03-26 17:33:57,031 | INFO     | sum of deviations: -26234781363.0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,031 | INFO     | mean x: 1774540385.5
[2026-03-26 13:34:59] 2026-03-26 17:33:57,031 | INFO     | mean y: 2380351.02020202
[2026-03-26 13:34:59] 2026-03-26 17:33:57,031 | INFO     | intersect: 19344337641.996117
[2026-03-26 13:34:59] 2026-03-26 17:33:57,031 | INFO     | chi2: 1.3850365329312844
[2026-03-26 13:34:59] 2026-03-26 17:33:57,031 | INFO     | sum of square deviations: 2229146912.0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,032 | INFO     | sum of deviations: -25329234472.0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,032 | INFO     | mean x: 1774540233.0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,032 | INFO     | mean y: 2381127.9792746115
[2026-03-26 13:34:59] 2026-03-26 17:33:57,032 | INFO     | intersect: 20166034496.759354
[2026-03-26 13:34:59] 2026-03-26 17:33:57,032 | INFO     | chi2: 1.3819549680466852
[2026-03-26 13:34:59] 2026-03-26 17:33:57,032 | INFO     | current chi2=1.3819549680466852 (change=0.22248979079832645 %)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,033 | INFO     | right removable region: 192
[2026-03-26 13:34:59] 2026-03-26 17:33:57,033 | INFO     | sum of square deviations: 2229146912.0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,034 | INFO     | sum of deviations: -44556207734.999985
[2026-03-26 13:34:59] 2026-03-26 17:33:57,034 | INFO     | mean x: 1774540538.0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,034 | INFO     | mean y: 2395732.8601036267
[2026-03-26 13:34:59] 2026-03-26 17:33:57,034 | INFO     | intersect: 35471927336.93351
[2026-03-26 13:34:59] 2026-03-26 17:33:57,034 | INFO     | chi2: 0.15372897845651734
[2026-03-26 13:34:59] 2026-03-26 17:33:57,034 | INFO     | current chi2=0.15372897845651734 (change=88.9007275402934 %)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,034 | INFO     | sum of square deviations: 2060343747.0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,035 | INFO     | sum of deviations: -35925065957.5
[2026-03-26 13:34:59] 2026-03-26 17:33:57,035 | INFO     | mean x: 1774540690.5
[2026-03-26 13:34:59] 2026-03-26 17:33:57,035 | INFO     | mean y: 2387931.75
[2026-03-26 13:34:59] 2026-03-26 17:33:57,035 | INFO     | intersect: 30944065233.561954
[2026-03-26 13:34:59] 2026-03-26 17:33:57,035 | INFO     | chi2: 0.12520366539520167
[2026-03-26 13:34:59] 2026-03-26 17:33:57,035 | INFO     | current chi2=0.12520366539520167 (change=18.555586167109105 %)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,035 | INFO     | left removable region: 20
[2026-03-26 13:34:59] 2026-03-26 17:33:57,035 | INFO     | sum of square deviations: 1577789583.0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,036 | INFO     | sum of deviations: -25311205007.0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,036 | INFO     | mean x: 1774540812.5
[2026-03-26 13:34:59] 2026-03-26 17:33:57,036 | INFO     | mean y: 2379494.4418604653
[2026-03-26 13:34:59] 2026-03-26 17:33:57,036 | INFO     | intersect: 28469905698.45778
[2026-03-26 13:34:59] 2026-03-26 17:33:57,036 | INFO     | chi2: 0.10251833385073528
[2026-03-26 13:34:59] 2026-03-26 17:33:57,036 | INFO     | current memory leak: -16.04 B/s (using 172 data points, chi2=0.10)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | could have reported an average CPU frequency of 3862 MHz (10 samples)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | ..............................
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | . Timing measurements:
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | . get job = 0 s
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | . initial setup = 6 s
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | . payload setup = 7 s
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | . stage-in = 0 s
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | . payload execution = 12057 s
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | . stage-out = 1 s
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | . log creation = 0 s
[2026-03-26 13:34:59] 2026-03-26 17:33:57,037 | INFO     | ..............................
[2026-03-26 13:34:59] 2026-03-26 17:33:57,139 | INFO     | time since job start (12083s) is within the limit (345600.0s)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,375 | INFO     | 
[2026-03-26 13:34:59] 2026-03-26 17:33:57,375 | INFO     | job summary report
[2026-03-26 13:34:59] 2026-03-26 17:33:57,375 | INFO     | --------------------------------------------------
[2026-03-26 13:34:59] 2026-03-26 17:33:57,375 | INFO     | PanDA job id: 7057133113
[2026-03-26 13:34:59] 2026-03-26 17:33:57,375 | INFO     | task id: 49190167
[2026-03-26 13:34:59] 2026-03-26 17:33:57,375 | INFO     | errors: (none)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | pilot state: finished 
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | transexitcode: 0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | exeerrorcode: 0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | exeerrordiag: 
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | exitcode: 0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | exitmsg: OK
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | cpuconsumptiontime: 47259 s
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | nevents: 400
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | neventsw: 0
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | pid: 2327908
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | pgrp: 2327908
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | corecount: 4
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | event service: False
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | sizes: {0: 2279880, 1: 2280341, 11: 2280341, 12068: 2310098, 12071: 2319110, 12072: 2319488}
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | --------------------------------------------------
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | 
[2026-03-26 13:34:59] 2026-03-26 17:33:57,376 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | job 7057133113 has completed (purged errors)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,393 | INFO     | overall cleanup function is called
[2026-03-26 13:34:59] 2026-03-26 17:33:57,520 | WARNING  | process 2327908 can no longer be monitored (due to stat problems) - aborting
[2026-03-26 13:34:59] 2026-03-26 17:33:57,612 | INFO     | using path: /var/lib/boinc-client/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 13:34:59] 2026-03-26 17:33:57,734 | INFO     | number of running child processes to parent process 2327908: 1
[2026-03-26 13:34:59] 2026-03-26 17:33:57,734 | INFO     | maximum number of monitored processes: 6
[2026-03-26 13:34:59] 2026-03-26 17:33:57,734 | INFO     | aborting job monitoring since job object (job id=7057133113) has expired
[2026-03-26 13:34:59] 2026-03-26 17:33:58,401 | INFO     | --- collectZombieJob: --- 10, [2327908]
[2026-03-26 13:34:59] 2026-03-26 17:33:58,401 | INFO     | zombie collector waiting for pid 2327908
[2026-03-26 13:34:59] 2026-03-26 17:33:58,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 13:34:59] 2026-03-26 17:33:58,401 | INFO     | collected zombie processes
[2026-03-26 13:34:59] 2026-03-26 17:33:58,401 | INFO     | will attempt to kill all subprocesses of pid=2327908
[2026-03-26 13:34:59] 2026-03-26 17:33:58,519 | INFO     | process IDs to be killed: [2327908] (in reverse order)
[2026-03-26 13:34:59] 2026-03-26 17:33:58,566 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 13:34:59] 2026-03-26 17:33:58,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 13:34:59] 2026-03-26 17:33:58,570 | INFO     | did not find any defunct processes belonging to 2327908
[2026-03-26 13:34:59] 2026-03-26 17:33:58,573 | INFO     | did not find any defunct processes belonging to 2327908
[2026-03-26 13:34:59] 2026-03-26 17:33:58,573 | INFO     | ready for new job
[2026-03-26 13:34:59] 2026-03-26 17:33:58,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 13:34:59] 2026-03-26 17:33:58,575 | INFO     | **************************************
[2026-03-26 13:34:59] 2026-03-26 17:33:58,575 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 13:34:59] 2026-03-26 17:33:58,575 | INFO     | **************************************
[2026-03-26 13:34:59] 2026-03-26 17:33:58,575 | INFO     | 
[2026-03-26 13:34:59] 2026-03-26 17:33:58,576 | INFO     | architecture information:
[2026-03-26 13:34:59] 2026-03-26 17:33:58,577 | INFO     | executing command: cat /etc/os-release
[2026-03-26 13:34:59] 2026-03-26 17:33:58,587 | INFO     | cat /etc/os-release:
[2026-03-26 13:34:59] NAME="CentOS Linux"
[2026-03-26 13:34:59] VERSION="7 (Core)"
[2026-03-26 13:34:59] ID="centos"
[2026-03-26 13:34:59] ID_LIKE="rhel fedora"
[2026-03-26 13:34:59] VERSION_ID="7"
[2026-03-26 13:34:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 13:34:59] ANSI_COLOR="0;31"
[2026-03-26 13:34:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 13:34:59] HOME_URL="https://www.centos.org/"
[2026-03-26 13:34:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 13:34:59] 
[2026-03-26 13:34:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 13:34:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 13:34:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 13:34:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 13:34:59] 
[2026-03-26 13:34:59] 2026-03-26 17:33:58,588 | INFO     | **************************************
[2026-03-26 13:34:59] 2026-03-26 17:33:59,091 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-03-26 13:34:59] 2026-03-26 17:33:59,102 | INFO     | sufficient remaining disk space (413384310784 B)
[2026-03-26 13:34:59] 2026-03-26 17:33:59,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 13:34:59] 2026-03-26 17:33:59,102 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 13:34:59] 2026-03-26 17:33:59,102 | INFO     | update_server=False
[2026-03-26 13:34:59] 2026-03-26 17:33:59,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 13:34:59] 2026-03-26 17:33:59,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 13:34:59] 2026-03-26 17:33:59,103 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-26 13:34:59] 2026-03-26 17:33:59,103 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 13:34:59] 2026-03-26 17:33:59,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 13:34:59] 2026-03-26 17:33:59,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 13:34:59] 2026-03-26 17:33:59,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 13:34:59] 2026-03-26 17:33:59,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 13:34:59] 2026-03-26 17:33:59,104 | INFO     | aborting loop
[2026-03-26 13:34:59] 2026-03-26 17:33:59,128 | INFO     | all payload control threads have been joined
[2026-03-26 13:34:59] 2026-03-26 17:33:59,244 | INFO     | job.realtimelogging is not enabled
[2026-03-26 13:34:59] 2026-03-26 17:33:59,325 | INFO     | all data control threads have been joined
[2026-03-26 13:34:59] 2026-03-26 17:33:59,881 | INFO     | all job control threads have been joined
[2026-03-26 13:34:59] 2026-03-26 17:34:00,108 | INFO     | [job] retrieve thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,108 | INFO     | [job] job monitor thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,133 | INFO     | [payload] control thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,250 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,252 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,318 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,329 | INFO     | [data] control thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,479 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,487 | INFO     | [data] copytool_in thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,552 | INFO     | [payload] failed_post thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:00,886 | INFO     | [job] control thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:01,108 | INFO     | [data] copytool_out thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:01,116 | INFO     | [payload] validate_post thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:01,367 | INFO     | [job] validate thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:02,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 13:34:59] 2026-03-26 17:34:03,107 | INFO     | [job] queue monitor thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:03,109 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 13:34:59] 2026-03-26 17:34:53,471 | INFO     | [monitor] cgroup control has ended
[2026-03-26 13:34:59] 2026-03-26 17:34:54,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135637592463168)>', '<ExcThread(monitor, started 135636946253568)>']
[2026-03-26 13:34:59] 2026-03-26 17:34:54,369 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 13:34:59] 2026-03-26 17:34:54,369 | INFO     | [monitor] control thread has ended
[2026-03-26 13:34:59] 2026-03-26 17:34:59,056 | INFO     | all workflow threads have been joined
[2026-03-26 13:34:59] 2026-03-26 17:34:59,056 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 13:34:59] 2026-03-26 17:34:59,056 | INFO     | traces error code: 0
[2026-03-26 13:34:59] 2026-03-26 17:34:59,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 13:34:59] 2026-03-26 17:34:59,123 [wrapper] ==== pilot stdout END ====
[2026-03-26 13:34:59] 2026-03-26 17:34:59,126 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 13:34:59] 2026-03-26 17:34:59,128 [wrapper] pilotpid: 2323336
[2026-03-26 13:34:59] 2026-03-26 17:34:59,129 [wrapper] Pilot exit status: 0
[2026-03-26 13:34:59] 2026-03-26 17:34:59,136 [wrapper] pandaids: 7057133113
[2026-03-26 13:34:59] 2026-03-26 17:34:59,167 [wrapper] cleanup supervisor_pilot 2380547 2323337
[2026-03-26 13:34:59] 2026-03-26 17:34:59,169 [wrapper] Test setup, not cleaning
[2026-03-26 13:34:59] 2026-03-26 17:34:59,171 [wrapper] apfmon messages muted
[2026-03-26 13:34:59] 2026-03-26 17:34:59,173 [wrapper] ==== wrapper stdout END ====
[2026-03-26 13:34:59] 2026-03-26 17:34:59,175 [wrapper] ==== wrapper stderr END ====
[2026-03-26 13:34:59]  *** Error codes and diagnostics ***
[2026-03-26 13:34:59]     "exeErrorCode": 0,
[2026-03-26 13:34:59]     "exeErrorDiag": "",
[2026-03-26 13:34:59]     "pilotErrorCode": 0,
[2026-03-26 13:34:59]     "pilotErrorDiag": "",
[2026-03-26 13:34:59]  *** Listing of results directory ***
[2026-03-26 13:34:59] total 474700
[2026-03-26 13:34:59] -rwx------ 1 boinc boinc     36322 Mar 17 02:06 runpilot2-wrapper.sh
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc    585013 Mar 17 02:08 pilot3.tar.gz
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc      5111 Mar 17 02:08 queuedata.json
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc       100 Mar 26 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 13:34:59] -rwxr-xr-x 1 boinc boinc      7986 Mar 26 10:12 run_atlas
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc       105 Mar 26 10:12 job.xml
[2026-03-26 13:34:59] -rw-r--r-- 2 boinc boinc 252200448 Mar 26 10:12 EVNT.49122252._000001.pool.root.1
[2026-03-26 13:34:59] -rw-r--r-- 2 boinc boinc     15845 Mar 26 10:12 start_atlas.sh
[2026-03-26 13:34:59] drwxrwx--x 2 boinc boinc      4096 Mar 26 10:12 shared
[2026-03-26 13:34:59] -rw-r--r-- 2 boinc boinc    597535 Mar 26 10:12 input.tar.gz
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc      6477 Mar 26 10:12 init_data.xml
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc         0 Mar 26 10:12 boinc_setup_complete
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc         0 Mar 26 10:12 boinc_lockfile
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc      2624 Mar 26 10:12 pandaJob.out
[2026-03-26 13:34:59] -rw------- 1 boinc boinc   1012192 Mar 26 10:12 agis_schedconf.cvmfs.json
[2026-03-26 13:34:59] -rw------- 1 boinc boinc       423 Mar 26 10:12 workernode_map.json
[2026-03-26 13:34:59] drwx------ 5 boinc boinc      4096 Mar 26 10:12 pilot3
[2026-03-26 13:34:59] -rw------- 1 boinc boinc 225704292 Mar 26 13:33 HITS.49190167._000021.pool.root.1
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc       530 Mar 26 13:33 boinc_task_state.xml
[2026-03-26 13:34:59] -rw------- 1 boinc boinc        95 Mar 26 13:33 pilot_heartbeat.json
[2026-03-26 13:34:59] -rw------- 1 boinc boinc      1025 Mar 26 13:33 memory_monitor_summary.json
[2026-03-26 13:34:59] -rw------- 1 boinc boinc   1511579 Mar 26 13:33 agis_ddmendpoints.agis.ALL.json
[2026-03-26 13:34:59] -rw------- 1 boinc boinc    380346 Mar 26 13:33 log.49190167._000021.job.log.tgz.1
[2026-03-26 13:34:59] -rw------- 1 boinc boinc      6301 Mar 26 13:33 heartbeat.json
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc      8192 Mar 26 13:34 boinc_mmap_file
[2026-03-26 13:34:59] -rw------- 1 boinc boinc      4628 Mar 26 13:34 pilotlog.txt
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc        28 Mar 26 13:34 wrapper_checkpoint.txt
[2026-03-26 13:34:59] -rw------- 1 boinc boinc   1739268 Mar 26 13:34 log.49190167._000021.job.log.1
[2026-03-26 13:34:59] -rw------- 1 boinc boinc       357 Mar 26 13:34 output.list
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc       620 Mar 26 13:34 runtime_log
[2026-03-26 13:34:59] -rw------- 1 boinc boinc   2140160 Mar 26 13:34 result.tar.gz
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc      8892 Mar 26 13:34 runtime_log.err
[2026-03-26 13:34:59] -rw------- 1 boinc boinc       646 Mar 26 13:34 IRlKDmTkcM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmErwLDmAO0dFm.diag
[2026-03-26 13:34:59] -rw-r--r-- 1 boinc boinc     21246 Mar 26 13:34 stderr.txt
[2026-03-26 13:34:59] HITS file was successfully produced:
[2026-03-26 13:34:59] -rw------- 1 boinc boinc 225704292 Mar 26 13:33 shared/HITS.pool.root.1
[2026-03-26 13:34:59]  *** Contents of shared directory: ***
[2026-03-26 13:34:59] total 469408
[2026-03-26 13:34:59] -rw-r--r-- 2 boinc boinc 252200448 Mar 26 10:12 ATLAS.root_0
[2026-03-26 13:34:59] -rw-r--r-- 2 boinc boinc     15845 Mar 26 10:12 start_atlas.sh
[2026-03-26 13:34:59] -rw-r--r-- 2 boinc boinc    597535 Mar 26 10:12 input.tar.gz
[2026-03-26 13:34:59] -rw------- 1 boinc boinc 225704292 Mar 26 13:33 HITS.pool.root.1
[2026-03-26 13:34:59] -rw------- 1 boinc boinc   2140160 Mar 26 13:34 result.tar.gz
13:35:01 (2319155): run_atlas exited; CPU time 47426.506580
13:35:01 (2319155): called boinc_finish(0)

</stderr_txt>
]]>

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