Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:09:14 (18879): wrapper (7.7.26015): starting
11:09:14 (18879): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 11:09:14] Arguments: --nthreads 8
[2026-03-25 11:09:14] Threads: 8
[2026-03-25 11:09:14] Checking for CVMFS
[2026-03-25 11:09:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 11:09:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 11:09:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 11:09:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 11:09:14] 2.11.2.0 16446 289185 143232 157687 2 50 14251905 18432001 1833 130560 0 184721874 99.981 10858999 26691 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-25 11:09:14] CVMFS is ok
[2026-03-25 11:09:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 11:09:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 11:09:14] Further information can be found at the LHC@home message board.
[2026-03-25 11:09:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 11:09:14] Checking for apptainer binary...
[2026-03-25 11:09:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 11:09:14] Running /usr/bin/apptainer --version
[2026-03-25 11:09:14] apptainer version 1.3.2-1.el7
[2026-03-25 11:09:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 11:09:15] c-206-26.aglt2.org
[2026-03-25 11:09:15] apptainer works
[2026-03-25 11:09:15] Set ATHENA_PROC_NUMBER=8
[2026-03-25 11:09:15] Set ATHENA_CORE_NUMBER=8
[2026-03-25 11:09:15] Starting ATLAS job with PandaID=7057134977
[2026-03-25 11:09:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 16:35:09]  *** The last 200 lines of the pilot log: ***
[2026-03-25 16:35:09] 2026-03-25 20:34:06,028 | INFO     | intersect: -13492335724.399502
[2026-03-25 16:35:09] 2026-03-25 20:34:06,029 | INFO     | chi2: 1.525529843259039
[2026-03-25 16:35:09] 2026-03-25 20:34:06,029 | INFO     | sum of square deviations: 9599817202.5
[2026-03-25 16:35:09] 2026-03-25 20:34:06,033 | INFO     | sum of deviations: 74970095041.49998
[2026-03-25 16:35:09] 2026-03-25 20:34:06,033 | INFO     | mean x: 1774460931.5
[2026-03-25 16:35:09] 2026-03-25 20:34:06,034 | INFO     | mean y: 2499225.24522293
[2026-03-25 16:35:09] 2026-03-25 20:34:06,034 | INFO     | intersect: -13855213049.457186
[2026-03-25 16:35:09] 2026-03-25 20:34:06,034 | INFO     | chi2: 1.5255647818886087
[2026-03-25 16:35:09] 2026-03-25 20:34:06,035 | INFO     | current chi2=1.5255647818886087 (change=-0.002290261952206292 %)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,035 | INFO     | right removable region: 313
[2026-03-25 16:35:09] 2026-03-25 20:34:06,035 | INFO     | sum of square deviations: 9599817202.5
[2026-03-25 16:35:09] 2026-03-25 20:34:06,039 | INFO     | sum of deviations: 30808297751.5
[2026-03-25 16:35:09] 2026-03-25 20:34:06,039 | INFO     | mean x: 1774461236.5
[2026-03-25 16:35:09] 2026-03-25 20:34:06,039 | INFO     | mean y: 2514600.0031847134
[2026-03-25 16:35:09] 2026-03-25 20:34:06,040 | INFO     | intersect: -5692190722.963809
[2026-03-25 16:35:09] 2026-03-25 20:34:06,040 | INFO     | chi2: 0.203241235133409
[2026-03-25 16:35:09] 2026-03-25 20:34:06,041 | INFO     | current chi2=0.203241235133409 (change=86.677334695779 %)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,041 | INFO     | sum of square deviations: 9148487810.0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,045 | INFO     | sum of deviations: 14581523264.99999
[2026-03-25 16:35:09] 2026-03-25 20:34:06,045 | INFO     | mean x: 1774461389.0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,045 | INFO     | mean y: 2520095.5307443365
[2026-03-25 16:35:09] 2026-03-25 20:34:06,045 | INFO     | intersect: -2825745139.546144
[2026-03-25 16:35:09] 2026-03-25 20:34:06,046 | INFO     | chi2: 0.10743616665025675
[2026-03-25 16:35:09] 2026-03-25 20:34:06,046 | INFO     | current chi2=0.10743616665025675 (change=47.138597844214594 %)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,047 | INFO     | sum of square deviations: 8711530780.0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,050 | INFO     | sum of deviations: -1269614258.5000017
[2026-03-25 16:35:09] 2026-03-25 20:34:06,050 | INFO     | mean x: 1774461541.5
[2026-03-25 16:35:09] 2026-03-25 20:34:06,051 | INFO     | mean y: 2525614.0559210526
[2026-03-25 16:35:09] 2026-03-25 20:34:06,051 | INFO     | intersect: 261134775.99798474
[2026-03-25 16:35:09] 2026-03-25 20:34:06,051 | INFO     | chi2: 0.006320656388895503
[2026-03-25 16:35:09] 2026-03-25 20:34:06,052 | INFO     | current chi2=0.006320656388895503 (change=94.11682621786804 %)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,052 | INFO     | sum of square deviations: 8288713550.0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,056 | INFO     | sum of deviations: -3308979525.999998
[2026-03-25 16:35:09] 2026-03-25 20:34:06,056 | INFO     | mean x: 1774461694.0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,056 | INFO     | mean y: 2526347.7357859532
[2026-03-25 16:35:09] 2026-03-25 20:34:06,057 | INFO     | intersect: 710918232.6402019
[2026-03-25 16:35:09] 2026-03-25 20:34:06,057 | INFO     | chi2: 0.004473405862716863
[2026-03-25 16:35:09] 2026-03-25 20:34:06,057 | INFO     | current chi2=0.004473405862716863 (change=29.225612223186136 %)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,058 | INFO     | sum of square deviations: 7879803557.5
[2026-03-25 16:35:09] 2026-03-25 20:34:06,061 | INFO     | sum of deviations: -3418474922.4999995
[2026-03-25 16:35:09] 2026-03-25 20:34:06,062 | INFO     | mean x: 1774461846.5
[2026-03-25 16:35:09] 2026-03-25 20:34:06,062 | INFO     | mean y: 2526387.663265306
[2026-03-25 16:35:09] 2026-03-25 20:34:06,062 | INFO     | intersect: 772336609.3178035
[2026-03-25 16:35:09] 2026-03-25 20:34:06,062 | INFO     | chi2: 0.004408046590600864
[2026-03-25 16:35:09] 2026-03-25 20:34:06,063 | INFO     | current chi2=0.004408046590600864 (change=1.4610628707028162 %)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,063 | INFO     | left removable region: 50
[2026-03-25 16:35:09] 2026-03-25 20:34:06,063 | INFO     | sum of square deviations: 5640782972.0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,066 | INFO     | sum of deviations: -396506527.0000075
[2026-03-25 16:35:09] 2026-03-25 20:34:06,066 | INFO     | mean x: 1774462426.0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,067 | INFO     | mean y: 2524810.9125475287
[2026-03-25 16:35:09] 2026-03-25 20:34:06,067 | INFO     | intersect: 127256774.06691153
[2026-03-25 16:35:09] 2026-03-25 20:34:06,067 | INFO     | chi2: 0.0034744071621389165
[2026-03-25 16:35:09] 2026-03-25 20:34:06,068 | INFO     | current memory leak: -0.07 B/s (using 263 data points, chi2=0.00)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,068 | INFO     | could have reported an average CPU frequency of 2511 MHz (14 samples)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,068 | INFO     | ..............................
[2026-03-25 16:35:09] 2026-03-25 20:34:06,069 | INFO     | . Timing measurements:
[2026-03-25 16:35:09] 2026-03-25 20:34:06,069 | INFO     | . get job = 0 s
[2026-03-25 16:35:09] 2026-03-25 20:34:06,069 | INFO     | . initial setup = 6 s
[2026-03-25 16:35:09] 2026-03-25 20:34:06,069 | INFO     | . payload setup = 8 s
[2026-03-25 16:35:09] 2026-03-25 20:34:06,069 | INFO     | . stage-in = 0 s
[2026-03-25 16:35:09] 2026-03-25 20:34:06,069 | INFO     | . payload execution = 19456 s
[2026-03-25 16:35:09] 2026-03-25 20:34:06,070 | INFO     | . stage-out = 2 s
[2026-03-25 16:35:09] 2026-03-25 20:34:06,070 | INFO     | . log creation = 0 s
[2026-03-25 16:35:09] 2026-03-25 20:34:06,070 | INFO     | ..............................
[2026-03-25 16:35:09] 2026-03-25 20:34:06,165 | INFO     | 
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | job summary report
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | --------------------------------------------------
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | PanDA job id: 7057134977
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | task id: 49190273
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | errors: (none)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | pilot state: finished 
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | transexitcode: 0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | exeerrorcode: 0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,166 | INFO     | exeerrordiag: 
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | exitcode: 0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | exitmsg: OK
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | cpuconsumptiontime: 147185 s
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | nevents: 400
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | neventsw: 0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | pid: 27002
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | pgrp: 27002
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | corecount: 8
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | event service: False
[2026-03-25 16:35:09] 2026-03-25 20:34:06,167 | INFO     | sizes: {0: 2280122, 1: 2280356, 19468: 2313369, 19471: 2322423, 19473: 2322561}
[2026-03-25 16:35:09] 2026-03-25 20:34:06,168 | INFO     | --------------------------------------------------
[2026-03-25 16:35:09] 2026-03-25 20:34:06,168 | INFO     | 
[2026-03-25 16:35:09] 2026-03-25 20:34:06,168 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-25 16:35:09] 2026-03-25 20:34:06,184 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,184 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,185 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,185 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,187 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,188 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 16:35:09] 2026-03-25 20:34:06,188 | INFO     | job 7057134977 has completed (purged errors)
[2026-03-25 16:35:09] 2026-03-25 20:34:06,188 | INFO     | overall cleanup function is called
[2026-03-25 16:35:09] 2026-03-25 20:34:07,197 | INFO     | --- collectZombieJob: --- 10, [27002]
[2026-03-25 16:35:09] 2026-03-25 20:34:07,197 | INFO     | zombie collector waiting for pid 27002
[2026-03-25 16:35:09] 2026-03-25 20:34:07,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 16:35:09] 2026-03-25 20:34:07,197 | INFO     | collected zombie processes
[2026-03-25 16:35:09] 2026-03-25 20:34:07,197 | INFO     | will attempt to kill all subprocesses of pid=27002
[2026-03-25 16:35:09] 2026-03-25 20:34:07,347 | INFO     | process IDs to be killed: [27002] (in reverse order)
[2026-03-25 16:35:09] 2026-03-25 20:34:07,408 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 16:35:09] 2026-03-25 20:34:07,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 16:35:09] 2026-03-25 20:34:07,414 | INFO     | did not find any defunct processes belonging to 27002
[2026-03-25 16:35:09] 2026-03-25 20:34:07,419 | INFO     | did not find any defunct processes belonging to 27002
[2026-03-25 16:35:09] 2026-03-25 20:34:07,419 | INFO     | ready for new job
[2026-03-25 16:35:09] 2026-03-25 20:34:07,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 16:35:09] 2026-03-25 20:34:07,421 | INFO     | **************************************
[2026-03-25 16:35:09] 2026-03-25 20:34:07,422 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 16:35:09] 2026-03-25 20:34:07,422 | INFO     | **************************************
[2026-03-25 16:35:09] 2026-03-25 20:34:07,422 | INFO     | 
[2026-03-25 16:35:09] 2026-03-25 20:34:07,423 | INFO     | architecture information:
[2026-03-25 16:35:09] 2026-03-25 20:34:07,424 | INFO     | executing command: cat /etc/os-release
[2026-03-25 16:35:09] 2026-03-25 20:34:07,434 | INFO     | cat /etc/os-release:
[2026-03-25 16:35:09] NAME="CentOS Linux"
[2026-03-25 16:35:09] VERSION="7 (Core)"
[2026-03-25 16:35:09] ID="centos"
[2026-03-25 16:35:09] ID_LIKE="rhel fedora"
[2026-03-25 16:35:09] VERSION_ID="7"
[2026-03-25 16:35:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 16:35:09] ANSI_COLOR="0;31"
[2026-03-25 16:35:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 16:35:09] HOME_URL="https://www.centos.org/"
[2026-03-25 16:35:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 16:35:09] 
[2026-03-25 16:35:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 16:35:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 16:35:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 16:35:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 16:35:09] 
[2026-03-25 16:35:09] 2026-03-25 20:34:07,434 | INFO     | **************************************
[2026-03-25 16:35:09] 2026-03-25 20:34:07,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-25 16:35:09] 2026-03-25 20:34:07,952 | INFO     | sufficient remaining disk space (27804041216 B)
[2026-03-25 16:35:09] 2026-03-25 20:34:07,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 16:35:09] 2026-03-25 20:34:07,953 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 16:35:09] 2026-03-25 20:34:07,953 | INFO     | update_server=False
[2026-03-25 16:35:09] 2026-03-25 20:34:07,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 16:35:09] 2026-03-25 20:34:07,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 16:35:09] 2026-03-25 20:34:07,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 16:35:09] 2026-03-25 20:34:07,954 | INFO     | aborting loop
[2026-03-25 16:35:09] 2026-03-25 20:34:07,968 | INFO     | all data control threads have been joined
[2026-03-25 16:35:09] 2026-03-25 20:34:08,652 | INFO     | all job control threads have been joined
[2026-03-25 16:35:09] 2026-03-25 20:34:08,958 | INFO     | [job] retrieve thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:08,959 | INFO     | [job] queue monitor thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:08,959 | INFO     | [job] job monitor thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:08,973 | INFO     | [data] control thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:09,231 | INFO     | all payload control threads have been joined
[2026-03-25 16:35:09] 2026-03-25 20:34:09,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 16:35:09] 2026-03-25 20:34:09,459 | INFO     | [job] validate thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:09,562 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:09,659 | INFO     | [job] control thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:09,939 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 16:35:09] 2026-03-25 20:34:10,207 | INFO     | [payload] validate_post thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:10,237 | INFO     | [payload] control thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:10,356 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:10,361 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:10,384 | INFO     | [data] copytool_in thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:10,540 | INFO     | [payload] failed_post thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:11,254 | INFO     | [data] copytool_out thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:13,946 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:18,407 | INFO     | job.realtimelogging is not enabled
[2026-03-25 16:35:09] 2026-03-25 20:34:19,413 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 16:35:09] 2026-03-25 20:34:38,621 | INFO     | PID=22575 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 16:35:09] 2026-03-25 20:34:38,622 | INFO     | .. there are 3 such processes running
[2026-03-25 16:35:09] 2026-03-25 20:34:38,622 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 16:35:09] 2026-03-25 20:34:38,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 16:35:09] 2026-03-25 20:34:38,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 16:35:09] 2026-03-25 20:35:02,975 | INFO     | [monitor] cgroup control has ended
[2026-03-25 16:35:09] 2026-03-25 20:35:04,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128362227520)>', '<ExcThread(monitor, started 140127921755904)>']
[2026-03-25 16:35:09] 2026-03-25 20:35:04,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 16:35:09] 2026-03-25 20:35:04,756 | INFO     | [monitor] control thread has ended
[2026-03-25 16:35:09] 2026-03-25 20:35:09,310 | INFO     | all workflow threads have been joined
[2026-03-25 16:35:09] 2026-03-25 20:35:09,310 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 16:35:09] 2026-03-25 20:35:09,310 | INFO     | traces error code: 0
[2026-03-25 16:35:09] 2026-03-25 20:35:09,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 16:35:09] 2026-03-25 20:35:09,446 [wrapper] ==== pilot stdout END ====
[2026-03-25 16:35:09] 2026-03-25 20:35:09,448 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 16:35:09] 2026-03-25 20:35:09,450 [wrapper] pilotpid: 22575
[2026-03-25 16:35:09] 2026-03-25 20:35:09,453 [wrapper] Pilot exit status: 0
[2026-03-25 16:35:09] 2026-03-25 20:35:09,465 [wrapper] pandaids: 7057134977
[2026-03-25 16:35:09] 2026-03-25 20:35:09,514 [wrapper] cleanup supervisor_pilot 18945 22576
[2026-03-25 16:35:09] 2026-03-25 20:35:09,517 [wrapper] Test setup, not cleaning
[2026-03-25 16:35:09] 2026-03-25 20:35:09,520 [wrapper] apfmon messages muted
[2026-03-25 16:35:09] 2026-03-25 20:35:09,523 [wrapper] ==== wrapper stdout END ====
[2026-03-25 16:35:09] 2026-03-25 20:35:09,525 [wrapper] ==== wrapper stderr END ====
[2026-03-25 16:35:09]  *** Error codes and diagnostics ***
[2026-03-25 16:35:09]     "exeErrorCode": 0,
[2026-03-25 16:35:09]     "exeErrorDiag": "",
[2026-03-25 16:35:09]     "pilotErrorCode": 0,
[2026-03-25 16:35:09]     "pilotErrorDiag": "",
[2026-03-25 16:35:09]  *** Listing of results directory ***
[2026-03-25 16:35:09] total 470496
[2026-03-25 16:35:09] -rwx------ 1 boincer umatlas     36322 Mar 17 02:06 runpilot2-wrapper.sh
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas    585013 Mar 17 02:08 pilot3.tar.gz
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas      5111 Mar 17 02:08 queuedata.json
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas       100 Mar 25 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 16:35:09] -rwxr-xr-x 1 boincer umatlas      7986 Mar 25 11:09 run_atlas
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas       105 Mar 25 11:09 job.xml
[2026-03-25 16:35:09] -rw-r--r-- 2 boincer umatlas 249896853 Mar 25 11:09 EVNT.49122674._000001.pool.root.1
[2026-03-25 16:35:09] drwxrwx--x 2 boincer umatlas      4096 Mar 25 11:09 shared
[2026-03-25 16:35:09] -rw-r--r-- 2 boincer umatlas    597548 Mar 25 11:09 input.tar.gz
[2026-03-25 16:35:09] -rw-r--r-- 2 boincer umatlas     15845 Mar 25 11:09 start_atlas.sh
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas         0 Mar 25 11:09 boinc_lockfile
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas      2652 Mar 25 11:09 pandaJob.out
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas        57 Mar 25 11:09 setup.sh.local
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas   1011905 Mar 25 11:09 agis_schedconf.cvmfs.json
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas       445 Mar 25 11:09 workernode_map.json
[2026-03-25 16:35:09] drwx------ 5 boincer umatlas      4096 Mar 25 11:09 pilot3
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas      5953 Mar 25 16:31 init_data.xml
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas 221430184 Mar 25 16:33 HITS.49190273._000012.pool.root.1
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas       531 Mar 25 16:33 boinc_task_state.xml
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas      1054 Mar 25 16:33 memory_monitor_summary.json
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas   1511579 Mar 25 16:34 agis_ddmendpoints.agis.ALL.json
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas    534239 Mar 25 16:34 log.49190273._000012.job.log.tgz.1
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas      6415 Mar 25 16:34 heartbeat.json
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas        29 Mar 25 16:34 wrapper_checkpoint.txt
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas      8192 Mar 25 16:34 boinc_mmap_file
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas        95 Mar 25 16:34 pilot_heartbeat.json
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas      4889 Mar 25 16:35 pilotlog.txt
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas   2723111 Mar 25 16:35 log.49190273._000012.job.log.1
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas       357 Mar 25 16:35 output.list
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas       620 Mar 25 16:35 runtime_log
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas   3276800 Mar 25 16:35 result.tar.gz
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas      9342 Mar 25 16:35 runtime_log.err
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas       663 Mar 25 16:35 o4DMDmTkcM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgrzLDm14sj3n.diag
[2026-03-25 16:35:09] -rw-r--r-- 1 boincer umatlas     20871 Mar 25 16:35 stderr.txt
[2026-03-25 16:35:09] HITS file was successfully produced:
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas 221430184 Mar 25 16:33 shared/HITS.pool.root.1
[2026-03-25 16:35:09]  *** Contents of shared directory: ***
[2026-03-25 16:35:09] total 464088
[2026-03-25 16:35:09] -rw-r--r-- 2 boincer umatlas 249896853 Mar 25 11:09 ATLAS.root_0
[2026-03-25 16:35:09] -rw-r--r-- 2 boincer umatlas    597548 Mar 25 11:09 input.tar.gz
[2026-03-25 16:35:09] -rw-r--r-- 2 boincer umatlas     15845 Mar 25 11:09 start_atlas.sh
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas 221430184 Mar 25 16:33 HITS.pool.root.1
[2026-03-25 16:35:09] -rw------- 1 boincer umatlas   3276800 Mar 25 16:35 result.tar.gz
16:35:11 (18879): run_atlas exited; CPU time 147484.460260
16:35:11 (18879): called boinc_finish(0)

</stderr_txt>
]]>

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