Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:12:43 (3813677): wrapper (7.7.26015): starting
13:12:43 (3813677): wrapper: running run_atlas (--nthreads 12)
[2026-03-27 13:12:43] Arguments: --nthreads 12
[2026-03-27 13:12:43] Threads: 12
[2026-03-27 13:12:43] Checking for CVMFS
[2026-03-27 13:12:43] No cvmfs_config command found, will try listing directly
[2026-03-27 13:12:43] CVMFS is ok
[2026-03-27 13:12:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-27 13:12:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-27 13:12:43] Further information can be found at the LHC@home message board.
[2026-03-27 13:12:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-27 13:12:43] Checking for apptainer binary...
[2026-03-27 13:12:43] which: no apptainer in ((null))
[2026-03-27 13:12:43] apptainer is not installed, using version from CVMFS
[2026-03-27 13:12:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-27 13:12:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-27 13:12:43] apptainer works
[2026-03-27 13:12:43] Set ATHENA_PROC_NUMBER=12
[2026-03-27 13:12:43] Set ATHENA_CORE_NUMBER=12
[2026-03-27 13:12:43] Starting ATLAS job with PandaID=7063833875
[2026-03-27 13:12:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-27 14:13:06]  *** The last 200 lines of the pilot log: ***
[2026-03-27 14:13:06]  is_altstaged=None
[2026-03-27 14:13:06]  is_tar=False
[2026-03-27 14:13:06]  lfn=log.49177083._000203.job.log.tgz.1
[2026-03-27 14:13:06]  mtime=0
[2026-03-27 14:13:06]  protocol_id=None
[2026-03-27 14:13:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-27 14:13:06]  replicas=None
[2026-03-27 14:13:06]  scope=mc23_13p6TeV
[2026-03-27 14:13:06]  status=None
[2026-03-27 14:13:06]  status_code=0
[2026-03-27 14:13:06]  storage_token=
[2026-03-27 14:13:06]  surl=/var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7063833875/log.49177083._000203.job.log.tgz.1
[2026-03-27 14:13:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/10/log.49177083._000203.job.log.tgz.1
[2026-03-27 14:13:06]  workdir=None
[2026-03-27 14:13:06] ]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,679 | INFO     | transferring file log.49177083._000203.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7063833875/log.49177083._000203.job.log.tgz.1 to /var/lib/b
[2026-03-27 14:13:06] 2026-03-27 13:12:08,679 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7063833875/log.49177083._000203.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/1/lo
[2026-03-27 14:13:06] 2026-03-27 13:12:08,696 | INFO     | adding to output.list: log.49177083._000203.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/10/log.49177083._000203.job.log.tg
[2026-03-27 14:13:06] 2026-03-27 13:12:08,697 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-27 14:13:06] 2026-03-27 13:12:08,697 | INFO     | summary of transferred files:
[2026-03-27 14:13:06] 2026-03-27 13:12:08,697 | INFO     |  -- lfn=log.49177083._000203.job.log.tgz.1, status_code=0, status=transferred
[2026-03-27 14:13:06] 2026-03-27 13:12:08,697 | INFO     | stage-out finished correctly
[2026-03-27 14:13:06] 2026-03-27 13:12:08,744 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-27 14:13:06] 2026-03-27 13:12:08,794 | INFO     | job 7063833875 has state=finished
[2026-03-27 14:13:06] 2026-03-27 13:12:08,794 | INFO     | preparing for final server update for job 7063833875 in state='finished'
[2026-03-27 14:13:06] 2026-03-27 13:12:08,794 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7063833875/jobReport.json
[2026-03-27 14:13:06] 2026-03-27 13:12:08,796 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/1/workernode_map.json
[2026-03-27 14:13:06] 2026-03-27 13:12:08,796 | INFO     | this job has now completed (state=finished)
[2026-03-27 14:13:06] 2026-03-27 13:12:08,796 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-27 14:13:06] 2026-03-27 13:12:08,796 | INFO     | log transfer has been attempted: DONE
[2026-03-27 14:13:06] 2026-03-27 13:12:08,796 | INFO     | job 7063833875 has finished - writing final server update
[2026-03-27 14:13:06] 2026-03-27 13:12:08,796 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3142798/.job.ad'
[2026-03-27 14:13:06] 2026-03-27 13:12:08,796 | INFO     | total number of processed events: 400 (read)
[2026-03-27 14:13:06] 2026-03-27 13:12:08,814 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7063833875/memory_monitor_summary.json (trf name=prmon)
[2026-03-27 14:13:06] 2026-03-27 13:12:08,815 | INFO     | extracted standard info from prmon json
[2026-03-27 14:13:06] 2026-03-27 13:12:08,815 | INFO     | extracted standard memory fields from prmon json
[2026-03-27 14:13:06] 2026-03-27 13:12:08,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-27 14:13:06] 2026-03-27 13:12:08,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-27 14:13:06] 2026-03-27 13:12:08,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-27 14:13:06] 2026-03-27 13:12:08,816 | INFO     | fitting pss+swap vs Time
[2026-03-27 14:13:06] 2026-03-27 13:12:08,816 | INFO     | sum of square deviations: 41117050.0
[2026-03-27 14:13:06] 2026-03-27 13:12:08,816 | INFO     | sum of deviations: 515706139.00000006
[2026-03-27 14:13:06] 2026-03-27 13:12:08,816 | INFO     | mean x: 1774615428.0
[2026-03-27 14:13:06] 2026-03-27 13:12:08,816 | INFO     | mean y: 2720094.254901961
[2026-03-27 14:13:06] 2026-03-27 13:12:08,816 | INFO     | intersect: -22255201390.474976
[2026-03-27 14:13:06] 2026-03-27 13:12:08,816 | INFO     | chi2: 0.0018475912220078934
[2026-03-27 14:13:06] 2026-03-27 13:12:08,816 | INFO     | current memory leak: 12.54 B/s (using 51 data points, chi2=0.00)
[2026-03-27 14:13:06] 2026-03-27 13:12:08,816 | INFO     | could have reported an average CPU frequency of 3565 MHz (5 samples)
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | ..............................
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | . Timing measurements:
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | . get job = 0 s
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | . initial setup = 4 s
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | . payload setup = 7 s
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | . stage-in = 0 s
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | . payload execution = 3531 s
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | . stage-out = 0 s
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | . log creation = 0 s
[2026-03-27 14:13:06] 2026-03-27 13:12:08,817 | INFO     | ..............................
[2026-03-27 14:13:06] 2026-03-27 13:12:08,865 | INFO     | 
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | job summary report
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | --------------------------------------------------
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | PanDA job id: 7063833875
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | task id: 49177083
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | errors: (none)
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | pilot state: finished 
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | transexitcode: 0
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | exeerrorcode: 0
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | exeerrordiag: 
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | exitcode: 0
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | exitmsg: OK
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | cpuconsumptiontime: 39195 s
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | nevents: 400
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | neventsw: 0
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | pid: 3832505
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | pgrp: 3832505
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | corecount: 12
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | event service: False
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | sizes: {0: 2279864, 1: 2280325, 11: 2280325, 3542: 2315080, 3543: 2315250}
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | --------------------------------------------------
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | 
[2026-03-27 14:13:06] 2026-03-27 13:12:08,866 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/1
[2026-03-27 14:13:06] 2026-03-27 13:12:08,885 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,885 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,885 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,885 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | job 7063833875 has completed (purged errors)
[2026-03-27 14:13:06] 2026-03-27 13:12:08,886 | INFO     | overall cleanup function is called
[2026-03-27 14:13:06] 2026-03-27 13:12:09,893 | INFO     | --- collectZombieJob: --- 10, [3832505]
[2026-03-27 14:13:06] 2026-03-27 13:12:09,894 | INFO     | zombie collector waiting for pid 3832505
[2026-03-27 14:13:06] 2026-03-27 13:12:09,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-27 14:13:06] 2026-03-27 13:12:09,894 | INFO     | collected zombie processes
[2026-03-27 14:13:06] 2026-03-27 13:12:09,894 | INFO     | will attempt to kill all subprocesses of pid=3832505
[2026-03-27 14:13:06] 2026-03-27 13:12:10,254 | INFO     | process IDs to be killed: [3832505] (in reverse order)
[2026-03-27 14:13:06] 2026-03-27 13:12:10,428 | WARNING  | found no corresponding commands to process id(s)
[2026-03-27 14:13:06] 2026-03-27 13:12:10,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-27 14:13:06] 2026-03-27 13:12:10,453 | INFO     | did not find any defunct processes belonging to 3832505
[2026-03-27 14:13:06] 2026-03-27 13:12:10,474 | INFO     | did not find any defunct processes belonging to 3832505
[2026-03-27 14:13:06] 2026-03-27 13:12:10,475 | INFO     | ready for new job
[2026-03-27 14:13:06] 2026-03-27 13:12:10,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-27 14:13:06] 2026-03-27 13:12:10,476 | INFO     | **************************************
[2026-03-27 14:13:06] 2026-03-27 13:12:10,476 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-27 14:13:06] 2026-03-27 13:12:10,476 | INFO     | **************************************
[2026-03-27 14:13:06] 2026-03-27 13:12:10,476 | INFO     | 
[2026-03-27 14:13:06] 2026-03-27 13:12:10,481 | INFO     | architecture information:
[2026-03-27 14:13:06] 2026-03-27 13:12:10,482 | INFO     | executing command: cat /etc/os-release
[2026-03-27 14:13:06] 2026-03-27 13:12:10,496 | INFO     | cat /etc/os-release:
[2026-03-27 14:13:06] NAME="CentOS Linux"
[2026-03-27 14:13:06] VERSION="7 (Core)"
[2026-03-27 14:13:06] ID="centos"
[2026-03-27 14:13:06] ID_LIKE="rhel fedora"
[2026-03-27 14:13:06] VERSION_ID="7"
[2026-03-27 14:13:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-27 14:13:06] ANSI_COLOR="0;31"
[2026-03-27 14:13:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-27 14:13:06] HOME_URL="https://www.centos.org/"
[2026-03-27 14:13:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-27 14:13:06] 
[2026-03-27 14:13:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-27 14:13:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-27 14:13:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-27 14:13:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-27 14:13:06] 
[2026-03-27 14:13:06] 2026-03-27 13:12:10,496 | INFO     | **************************************
[2026-03-27 14:13:06] 2026-03-27 13:12:10,999 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/1
[2026-03-27 14:13:06] 2026-03-27 13:12:11,014 | INFO     | sufficient remaining disk space (244617052160 B)
[2026-03-27 14:13:06] 2026-03-27 13:12:11,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-27 14:13:06] 2026-03-27 13:12:11,015 | INFO     | current server update state: UPDATING_FINAL
[2026-03-27 14:13:06] 2026-03-27 13:12:11,015 | INFO     | update_server=False
[2026-03-27 14:13:06] 2026-03-27 13:12:11,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-27 14:13:06] 2026-03-27 13:12:11,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-27 14:13:06] 2026-03-27 13:12:11,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-27 14:13:06] 2026-03-27 13:12:11,783 | INFO     | all data control threads have been joined
[2026-03-27 14:13:06] 2026-03-27 13:12:11,991 | INFO     | all job control threads have been joined
[2026-03-27 14:13:06] 2026-03-27 13:12:12,020 | INFO     | [job] retrieve thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:12,084 | INFO     | [job] validate thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:12,172 | INFO     | [payload] execute_payloads thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:12,177 | INFO     | all payload control threads have been joined
[2026-03-27 14:13:06] 2026-03-27 13:12:12,223 | INFO     | [job] create_data_payload thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:12,267 | INFO     | [payload] validate_pre thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:12,379 | INFO     | [data] copytool_in thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:12,392 | INFO     | [payload] validate_post thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:12,686 | INFO     | [payload] failed_post thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:12,788 | INFO     | [data] control thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:12,997 | INFO     | [job] control thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:13,144 | WARNING  | process 3832505 can no longer be monitored (due to stat problems) - aborting
[2026-03-27 14:13:06] 2026-03-27 13:12:13,184 | INFO     | [payload] control thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:13,423 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-27 14:13:06] 2026-03-27 13:12:13,755 | INFO     | [data] copytool_out thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:13,800 | INFO     | number of running child processes to parent process 3832505: 1
[2026-03-27 14:13:06] 2026-03-27 13:12:13,800 | INFO     | maximum number of monitored processes: 6
[2026-03-27 14:13:06] 2026-03-27 13:12:13,800 | INFO     | aborting job monitoring since job object (job id=7063833875) has expired
[2026-03-27 14:13:06] 2026-03-27 13:12:13,800 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-27 14:13:06] 2026-03-27 13:12:13,800 | INFO     | will abort loop
[2026-03-27 14:13:06] 2026-03-27 13:12:13,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-27 14:13:06] 2026-03-27 13:12:14,805 | INFO     | [job] job monitor thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:14,888 | INFO     | [job] queue monitor thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:15,021 | INFO     | [data] queue_monitor thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:21,560 | INFO     | job.realtimelogging is not enabled
[2026-03-27 14:13:06] 2026-03-27 13:12:22,564 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-27 14:13:06] 2026-03-27 13:12:41,829 | INFO     | PID=3818466 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-27 14:13:06] 2026-03-27 13:12:41,829 | INFO     | .. there are 16 such processes running
[2026-03-27 14:13:06] 2026-03-27 13:12:41,830 | INFO     | found 0 job(s) in 20 queues
[2026-03-27 14:13:06] 2026-03-27 13:12:41,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-27 14:13:06] 2026-03-27 13:12:41,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-27 14:13:06] 2026-03-27 13:12:50,494 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-03-27 14:13:06] 2026-03-27 13:13:00,791 | INFO     | [monitor] cgroup control has ended
[2026-03-27 14:13:06] 2026-03-27 13:13:01,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23161466636096)>', '<ExcThread(monitor, started 23161229031168)>']
[2026-03-27 14:13:06] 2026-03-27 13:13:01,921 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-27 14:13:06] 2026-03-27 13:13:01,922 | INFO     | [monitor] control thread has ended
[2026-03-27 14:13:06] 2026-03-27 13:13:06,336 | INFO     | all workflow threads have been joined
[2026-03-27 14:13:06] 2026-03-27 13:13:06,337 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-27 14:13:06] 2026-03-27 13:13:06,337 | INFO     | traces error code: 0
[2026-03-27 14:13:06] 2026-03-27 13:13:06,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-27 14:13:06] 2026-03-27 13:13:06,532 [wrapper] ==== pilot stdout END ====
[2026-03-27 14:13:06] 2026-03-27 13:13:06,535 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-27 14:13:06] 2026-03-27 13:13:06,537 [wrapper] pilotpid: 3818466
[2026-03-27 14:13:06] 2026-03-27 13:13:06,540 [wrapper] Pilot exit status: 0
[2026-03-27 14:13:06] 2026-03-27 13:13:06,550 [wrapper] pandaids: 7063833875
[2026-03-27 14:13:06] 2026-03-27 13:13:06,664 [wrapper] cleanup supervisor_pilot 4153303 3818467
[2026-03-27 14:13:06] 2026-03-27 13:13:06,667 [wrapper] Test setup, not cleaning
[2026-03-27 14:13:06] 2026-03-27 13:13:06,670 [wrapper] apfmon messages muted
[2026-03-27 14:13:06] 2026-03-27 13:13:06,673 [wrapper] ==== wrapper stdout END ====
[2026-03-27 14:13:06] 2026-03-27 13:13:06,676 [wrapper] ==== wrapper stderr END ====
[2026-03-27 14:13:06]  *** Error codes and diagnostics ***
[2026-03-27 14:13:06]     "exeErrorCode": 0,
[2026-03-27 14:13:06]     "exeErrorDiag": "",
[2026-03-27 14:13:06]     "pilotErrorCode": 0,
[2026-03-27 14:13:06]     "pilotErrorDiag": "",
[2026-03-27 14:13:06]  *** Listing of results directory ***
[2026-03-27 14:13:06] total 421700
[2026-03-27 14:13:06] -rwx------. 1 boinc boinc     36322 Mar 24 03:43 runpilot2-wrapper.sh
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc    585013 Mar 24 03:46 pilot3.tar.gz
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc      5111 Mar 24 03:47 queuedata.json
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc       100 Mar 27 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-27 14:13:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar 27 13:12 run_atlas
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc       105 Mar 27 13:12 job.xml
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc      6710 Mar 27 13:12 init_data.xml
[2026-03-27 14:13:06] -rw-r--r--. 2 boinc boinc 222942888 Mar 27 13:12 EVNT.49136387._000009.pool.root.1
[2026-03-27 14:13:06] -rw-r--r--. 2 boinc boinc     15845 Mar 27 13:12 start_atlas.sh
[2026-03-27 14:13:06] drwxrwx--x. 2 boinc boinc      4096 Mar 27 13:12 shared
[2026-03-27 14:13:06] -rw-r--r--. 2 boinc boinc    597533 Mar 27 13:12 input.tar.gz
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc         0 Mar 27 13:12 boinc_lockfile
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc      2602 Mar 27 13:12 pandaJob.out
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc   1009333 Mar 27 13:12 agis_schedconf.cvmfs.json
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc   1511579 Mar 27 13:12 agis_ddmendpoints.agis.ALL.json
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc       444 Mar 27 13:12 workernode_map.json
[2026-03-27 14:13:06] drwx------. 5 boinc boinc      4096 Mar 27 13:12 pilot3
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc 203143648 Mar 27 14:11 HITS.49177083._000203.pool.root.1
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc       529 Mar 27 14:11 boinc_task_state.xml
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc      1029 Mar 27 14:12 memory_monitor_summary.json
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc    359234 Mar 27 14:12 log.49177083._000203.job.log.tgz.1
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc      6348 Mar 27 14:12 heartbeat.json
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc        95 Mar 27 14:12 pilot_heartbeat.json
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc      8192 Mar 27 14:12 boinc_mmap_file
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc        27 Mar 27 14:12 wrapper_checkpoint.txt
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc      5434 Mar 27 14:13 pilotlog.txt
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc    539273 Mar 27 14:13 log.49177083._000203.job.log.1
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc       357 Mar 27 14:13 output.list
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc       620 Mar 27 14:13 runtime_log
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc    911360 Mar 27 14:13 result.tar.gz
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc      9206 Mar 27 14:13 runtime_log.err
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc       663 Mar 27 14:13 YfANDmTv6O9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2xBMDmGWNsgn.diag
[2026-03-27 14:13:06] -rw-r--r--. 1 boinc boinc     21325 Mar 27 14:13 stderr.txt
[2026-03-27 14:13:06] HITS file was successfully produced:
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc 203143648 Mar 27 14:11 shared/HITS.pool.root.1
[2026-03-27 14:13:06]  *** Contents of shared directory: ***
[2026-03-27 14:13:06] total 417604
[2026-03-27 14:13:06] -rw-r--r--. 2 boinc boinc 222942888 Mar 27 13:12 ATLAS.root_0
[2026-03-27 14:13:06] -rw-r--r--. 2 boinc boinc     15845 Mar 27 13:12 start_atlas.sh
[2026-03-27 14:13:06] -rw-r--r--. 2 boinc boinc    597533 Mar 27 13:12 input.tar.gz
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc 203143648 Mar 27 14:11 HITS.pool.root.1
[2026-03-27 14:13:06] -rw-------. 1 boinc boinc    911360 Mar 27 14:13 result.tar.gz
14:13:08 (3813677): run_atlas exited; CPU time 39322.148117
14:13:08 (3813677): called boinc_finish(0)

</stderr_txt>
]]>

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