Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
11:19:35 (3416385): wrapper (7.7.26015): starting
11:19:35 (3416385): wrapper: running run_atlas (--nthreads 4)
[2026-03-25 11:19:35] Arguments: --nthreads 4
[2026-03-25 11:19:35] Threads: 4
[2026-03-25 11:19:35] Checking for CVMFS
[2026-03-25 11:19:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 11:19:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 11:19:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 11:19:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 11:19:36] 2.13.3.0 1807772 5663 58328 157688 1 89 3167285 4096000 1763 130560 0 2671132 99.901 370198 1139 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-25 11:19:36] CVMFS is ok
[2026-03-25 11:19:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 11:19:36] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-25 11:19:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-25 11:19:36] Further information can be found at the LHC@home message board.
[2026-03-25 11:19:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 11:19:36] Checking for apptainer binary...
[2026-03-25 11:19:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 11:19:36] Running /usr/bin/apptainer --version
[2026-03-25 11:19:36] apptainer version 1.4.5
[2026-03-25 11:19:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 11:19:36] OptiPlex7070-Ubuntu
[2026-03-25 11:19:36] apptainer works
[2026-03-25 11:19:36] Set ATHENA_PROC_NUMBER=4
[2026-03-25 11:19:36] Set ATHENA_CORE_NUMBER=4
[2026-03-25 11:19:36] Starting ATLAS job with PandaID=7057110416
[2026-03-25 11:19:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 17:18:32]  *** The last 200 lines of the pilot log: ***
[2026-03-25 17:18:32] 2026-03-25 21:17:43,155 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-25 17:18:32] 2026-03-25 21:17:43,224 | INFO     | job 7057110416 has state=finished
[2026-03-25 17:18:32] 2026-03-25 21:17:43,224 | INFO     | preparing for final server update for job 7057110416 in state='finished'
[2026-03-25 17:18:32] 2026-03-25 21:17:43,224 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7057110416/jobReport.json
[2026-03-25 17:18:32] 2026-03-25 21:17:43,226 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/3/workernode_map.json
[2026-03-25 17:18:32] 2026-03-25 21:17:43,226 | INFO     | this job has now completed (state=finished)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,226 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,226 | INFO     | log transfer has been attempted: DONE
[2026-03-25 17:18:32] 2026-03-25 21:17:43,226 | INFO     | job 7057110416 has finished - writing final server update
[2026-03-25 17:18:32] 2026-03-25 21:17:43,227 | INFO     | total number of processed events: 400 (read)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,229 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7057110416/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,230 | INFO     | extracted standard info from prmon json
[2026-03-25 17:18:32] 2026-03-25 21:17:43,230 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 17:18:32] 2026-03-25 21:17:43,230 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 17:18:32] 2026-03-25 21:17:43,230 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 17:18:32] 2026-03-25 21:17:43,230 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 17:18:32] 2026-03-25 21:17:43,235 | INFO     | fitting pss+swap vs Time
[2026-03-25 17:18:32] 2026-03-25 21:17:43,235 | INFO     | sum of square deviations: 13523929848.0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,238 | INFO     | sum of deviations: -142768396537.0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,238 | INFO     | mean x: 1774462716.5
[2026-03-25 17:18:32] 2026-03-25 21:17:43,238 | INFO     | mean y: 2397453.2045454546
[2026-03-25 17:18:32] 2026-03-25 21:17:43,238 | INFO     | intersect: 18734910827.403923
[2026-03-25 17:18:32] 2026-03-25 21:17:43,239 | INFO     | chi2: 1.9318096991899927
[2026-03-25 17:18:32] 2026-03-25 21:17:43,239 | INFO     | sum of square deviations: 12955770358.0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,242 | INFO     | sum of deviations: -140579670787.00003
[2026-03-25 17:18:32] 2026-03-25 21:17:43,242 | INFO     | mean x: 1774462564.0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,242 | INFO     | mean y: 2398041.069164265
[2026-03-25 17:18:32] 2026-03-25 21:17:43,242 | INFO     | intersect: 19256626556.85496
[2026-03-25 17:18:32] 2026-03-25 21:17:43,242 | INFO     | chi2: 1.924706572392474
[2026-03-25 17:18:32] 2026-03-25 21:17:43,243 | INFO     | current chi2=1.924706572392474 (change=0.36769288406084344 %)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,243 | INFO     | right removable region: 346
[2026-03-25 17:18:32] 2026-03-25 21:17:43,243 | INFO     | sum of square deviations: 12955770358.0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,246 | INFO     | sum of deviations: -177052677510.00006
[2026-03-25 17:18:32] 2026-03-25 21:17:43,246 | INFO     | mean x: 1774462869.0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,246 | INFO     | mean y: 2406554.0922190202
[2026-03-25 17:18:32] 2026-03-25 21:17:43,246 | INFO     | intersect: 24252095566.566032
[2026-03-25 17:18:32] 2026-03-25 21:17:43,246 | INFO     | chi2: 0.706823677692086
[2026-03-25 17:18:32] 2026-03-25 21:17:43,246 | INFO     | current chi2=0.706823677692086 (change=63.41131955241466 %)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,247 | INFO     | sum of square deviations: 12403750705.5
[2026-03-25 17:18:32] 2026-03-25 21:17:43,249 | INFO     | sum of deviations: -161824667827.0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,250 | INFO     | mean x: 1774463021.5
[2026-03-25 17:18:32] 2026-03-25 21:17:43,250 | INFO     | mean y: 2402346.1812865497
[2026-03-25 17:18:32] 2026-03-25 21:17:43,250 | INFO     | intersect: 23152810302.88143
[2026-03-25 17:18:32] 2026-03-25 21:17:43,250 | INFO     | chi2: 0.6907421539019473
[2026-03-25 17:18:32] 2026-03-25 21:17:43,250 | INFO     | current chi2=0.6907421539019473 (change=2.275181816580899 %)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,250 | INFO     | left removable region: 20
[2026-03-25 17:18:32] 2026-03-25 21:17:43,251 | INFO     | sum of square deviations: 10743038637.5
[2026-03-25 17:18:32] 2026-03-25 21:17:43,253 | INFO     | sum of deviations: -125769326212.99998
[2026-03-25 17:18:32] 2026-03-25 21:17:43,253 | INFO     | mean x: 1774463143.5
[2026-03-25 17:18:32] 2026-03-25 21:17:43,253 | INFO     | mean y: 2393235.987730061
[2026-03-25 17:18:32] 2026-03-25 21:17:43,253 | INFO     | intersect: 20776127882.047913
[2026-03-25 17:18:32] 2026-03-25 21:17:43,254 | INFO     | chi2: 0.6223837940008354
[2026-03-25 17:18:32] 2026-03-25 21:17:43,254 | INFO     | current memory leak: -11.71 B/s (using 326 data points, chi2=0.62)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,254 | INFO     | could have reported an average CPU frequency of 3497 MHz (15 samples)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | ..............................
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | . Timing measurements:
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | . get job = 0 s
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | . initial setup = 5 s
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | . payload setup = 5 s
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | . stage-in = 0 s
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | . payload execution = 21445 s
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | . stage-out = 2 s
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | . log creation = 0 s
[2026-03-25 17:18:32] 2026-03-25 21:17:43,255 | INFO     | ..............................
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | 
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | job summary report
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | --------------------------------------------------
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | PanDA job id: 7057110416
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | task id: 49176283
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | errors: (none)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | pilot state: finished 
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | transexitcode: 0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,805 | INFO     | exeerrorcode: 0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | exeerrordiag: 
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | exitcode: 0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | exitmsg: OK
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | cpuconsumptiontime: 84530 s
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | nevents: 400
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | neventsw: 0
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | pid: 3425121
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | pgrp: 3425121
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | corecount: 4
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | event service: False
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | sizes: {0: 2279212, 1: 2280344, 12: 2280344, 21454: 2314420, 21455: 2314419, 21458: 2323501, 21460: 2323879}
[2026-03-25 17:18:32] 2026-03-25 21:17:43,806 | INFO     | --------------------------------------------------
[2026-03-25 17:18:32] 2026-03-25 21:17:43,807 | INFO     | 
[2026-03-25 17:18:32] 2026-03-25 21:17:43,807 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-25 17:18:32] 2026-03-25 21:17:43,821 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | job 7057110416 has completed (purged errors)
[2026-03-25 17:18:32] 2026-03-25 21:17:43,823 | INFO     | overall cleanup function is called
[2026-03-25 17:18:32] 2026-03-25 21:17:44,830 | INFO     | --- collectZombieJob: --- 10, [3425121]
[2026-03-25 17:18:32] 2026-03-25 21:17:44,830 | INFO     | zombie collector waiting for pid 3425121
[2026-03-25 17:18:32] 2026-03-25 21:17:44,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 17:18:32] 2026-03-25 21:17:44,830 | INFO     | collected zombie processes
[2026-03-25 17:18:32] 2026-03-25 21:17:44,830 | INFO     | will attempt to kill all subprocesses of pid=3425121
[2026-03-25 17:18:32] 2026-03-25 21:17:44,975 | INFO     | process IDs to be killed: [3425121] (in reverse order)
[2026-03-25 17:18:32] 2026-03-25 21:17:45,014 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 17:18:32] 2026-03-25 21:17:45,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 17:18:32] 2026-03-25 21:17:45,017 | INFO     | did not find any defunct processes belonging to 3425121
[2026-03-25 17:18:32] 2026-03-25 21:17:45,020 | INFO     | did not find any defunct processes belonging to 3425121
[2026-03-25 17:18:32] 2026-03-25 21:17:45,020 | INFO     | ready for new job
[2026-03-25 17:18:32] 2026-03-25 21:17:45,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 17:18:32] 2026-03-25 21:17:45,022 | INFO     | **************************************
[2026-03-25 17:18:32] 2026-03-25 21:17:45,022 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 17:18:32] 2026-03-25 21:17:45,022 | INFO     | **************************************
[2026-03-25 17:18:32] 2026-03-25 21:17:45,022 | INFO     | 
[2026-03-25 17:18:32] 2026-03-25 21:17:45,023 | INFO     | architecture information:
[2026-03-25 17:18:32] 2026-03-25 21:17:45,023 | INFO     | executing command: cat /etc/os-release
[2026-03-25 17:18:32] 2026-03-25 21:17:45,036 | INFO     | cat /etc/os-release:
[2026-03-25 17:18:32] NAME="CentOS Linux"
[2026-03-25 17:18:32] VERSION="7 (Core)"
[2026-03-25 17:18:32] ID="centos"
[2026-03-25 17:18:32] ID_LIKE="rhel fedora"
[2026-03-25 17:18:32] VERSION_ID="7"
[2026-03-25 17:18:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 17:18:32] ANSI_COLOR="0;31"
[2026-03-25 17:18:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 17:18:32] HOME_URL="https://www.centos.org/"
[2026-03-25 17:18:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 17:18:32] 
[2026-03-25 17:18:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 17:18:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 17:18:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 17:18:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 17:18:32] 
[2026-03-25 17:18:32] 2026-03-25 21:17:45,036 | INFO     | **************************************
[2026-03-25 17:18:32] 2026-03-25 21:17:45,539 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-25 17:18:32] 2026-03-25 21:17:45,551 | INFO     | sufficient remaining disk space (410671644672 B)
[2026-03-25 17:18:32] 2026-03-25 21:17:45,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 17:18:32] 2026-03-25 21:17:45,551 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 17:18:32] 2026-03-25 21:17:45,552 | INFO     | update_server=False
[2026-03-25 17:18:32] 2026-03-25 21:17:45,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 17:18:32] 2026-03-25 21:17:45,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:18:32] 2026-03-25 21:17:45,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 17:18:32] 2026-03-25 21:17:45,552 | INFO     | aborting loop
[2026-03-25 17:18:32] 2026-03-25 21:17:45,912 | INFO     | all data control threads have been joined
[2026-03-25 17:18:32] 2026-03-25 21:17:46,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 17:18:32] 2026-03-25 21:17:46,503 | INFO     | all job control threads have been joined
[2026-03-25 17:18:32] 2026-03-25 21:17:46,557 | INFO     | [job] retrieve thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:46,557 | INFO     | [job] job monitor thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:46,724 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:46,917 | INFO     | [data] control thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:46,985 | INFO     | all payload control threads have been joined
[2026-03-25 17:18:32] 2026-03-25 21:17:47,036 | INFO     | [data] copytool_in thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:47,403 | INFO     | [payload] failed_post thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:47,442 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:47,508 | INFO     | [job] control thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:47,836 | INFO     | [job] validate thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:47,988 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:47,990 | INFO     | [payload] control thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:48,127 | INFO     | [payload] validate_post thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:48,233 | INFO     | [data] copytool_out thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:48,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:18:32] 2026-03-25 21:17:49,337 | INFO     | [job] queue monitor thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:49,558 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:17:56,507 | INFO     | job.realtimelogging is not enabled
[2026-03-25 17:18:32] 2026-03-25 21:17:57,513 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 17:18:32] 2026-03-25 21:18:15,808 | INFO     | PID=3420542 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 17:18:32] 2026-03-25 21:18:15,808 | INFO     | .. there are 3 such processes running
[2026-03-25 17:18:32] 2026-03-25 21:18:15,808 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 17:18:32] 2026-03-25 21:18:15,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 17:18:32] 2026-03-25 21:18:15,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 17:18:32] 2026-03-25 21:18:26,149 | INFO     | [monitor] cgroup control has ended
[2026-03-25 17:18:32] 2026-03-25 21:18:26,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130532218148672)>', '<ExcThread(monitor, started 130531370989312)>']
[2026-03-25 17:18:32] 2026-03-25 21:18:27,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 17:18:32] 2026-03-25 21:18:27,866 | INFO     | [monitor] control thread has ended
[2026-03-25 17:18:32] 2026-03-25 21:18:31,909 | INFO     | all workflow threads have been joined
[2026-03-25 17:18:32] 2026-03-25 21:18:31,909 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 17:18:32] 2026-03-25 21:18:31,909 | INFO     | traces error code: 0
[2026-03-25 17:18:32] 2026-03-25 21:18:31,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 17:18:32] 2026-03-25 21:18:31,982 [wrapper] ==== pilot stdout END ====
[2026-03-25 17:18:32] 2026-03-25 21:18:31,984 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 17:18:32] 2026-03-25 21:18:31,986 [wrapper] pilotpid: 3420542
[2026-03-25 17:18:32] 2026-03-25 21:18:31,988 [wrapper] Pilot exit status: 0
[2026-03-25 17:18:32] 2026-03-25 21:18:31,994 [wrapper] pandaids: 7057110416
[2026-03-25 17:18:32] 2026-03-25 21:18:32,020 [wrapper] cleanup supervisor_pilot 3509792 3420543
[2026-03-25 17:18:32] 2026-03-25 21:18:32,022 [wrapper] Test setup, not cleaning
[2026-03-25 17:18:32] 2026-03-25 21:18:32,024 [wrapper] apfmon messages muted
[2026-03-25 17:18:32] 2026-03-25 21:18:32,025 [wrapper] ==== wrapper stdout END ====
[2026-03-25 17:18:32] 2026-03-25 21:18:32,027 [wrapper] ==== wrapper stderr END ====
[2026-03-25 17:18:32]  *** Error codes and diagnostics ***
[2026-03-25 17:18:32]     "exeErrorCode": 0,
[2026-03-25 17:18:32]     "exeErrorDiag": "",
[2026-03-25 17:18:32]     "pilotErrorCode": 0,
[2026-03-25 17:18:32]     "pilotErrorDiag": "",
[2026-03-25 17:18:32]  *** Listing of results directory ***
[2026-03-25 17:18:32] total 477916
[2026-03-25 17:18:32] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 16 20:55 pilot3.tar.gz
[2026-03-25 17:18:32] -rwx------ 1 whitlerd whitlerd     36322 Mar 16 20:58 runpilot2-wrapper.sh
[2026-03-25 17:18:32] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 16 21:00 queuedata.json
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 25 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 17:18:32] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 25 11:19 run_atlas
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 25 11:19 job.xml
[2026-03-25 17:18:32] -rw-r--r-- 2 whitlerd whitlerd 243794356 Mar 25 11:19 EVNT.49133333._000007.pool.root.1
[2026-03-25 17:18:32] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 25 11:19 start_atlas.sh
[2026-03-25 17:18:32] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 25 11:19 shared
[2026-03-25 17:18:32] -rw-r--r-- 2 whitlerd whitlerd    597540 Mar 25 11:19 input.tar.gz
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd      6446 Mar 25 11:19 init_data.xml
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 25 11:19 boinc_setup_complete
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 25 11:19 boinc_lockfile
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd      2615 Mar 25 11:19 pandaJob.out
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd   1011933 Mar 25 11:19 agis_schedconf.cvmfs.json
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd       433 Mar 25 11:19 workernode_map.json
[2026-03-25 17:18:32] drwx------ 5 whitlerd whitlerd      4096 Mar 25 11:19 pilot3
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd 234433385 Mar 25 17:17 HITS.49176283._000168.pool.root.1
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 25 17:17 boinc_task_state.xml
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd      1031 Mar 25 17:17 memory_monitor_summary.json
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd   1511579 Mar 25 17:17 agis_ddmendpoints.agis.ALL.json
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd    514001 Mar 25 17:17 log.49176283._000168.job.log.tgz.1
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd      6358 Mar 25 17:17 heartbeat.json
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd        95 Mar 25 17:18 pilot_heartbeat.json
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 25 17:18 wrapper_checkpoint.txt
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 25 17:18 boinc_mmap_file
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd      4906 Mar 25 17:18 pilotlog.txt
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd   3089723 Mar 25 17:18 log.49176283._000168.job.log.1
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd       357 Mar 25 17:18 output.list
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 25 17:18 runtime_log
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd   3624960 Mar 25 17:18 result.tar.gz
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd      9055 Mar 25 17:18 runtime_log.err
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd       660 Mar 25 17:18 BydLDmUwXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmaawLDmteXIAn.diag
[2026-03-25 17:18:32] -rw-rw-r-- 1 whitlerd whitlerd     21400 Mar 25 17:18 stderr.txt
[2026-03-25 17:18:32] HITS file was successfully produced:
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd 234433385 Mar 25 17:17 shared/HITS.pool.root.1
[2026-03-25 17:18:32]  *** Contents of shared directory: ***
[2026-03-25 17:18:32] total 471172
[2026-03-25 17:18:32] -rw-r--r-- 2 whitlerd whitlerd 243794356 Mar 25 11:19 ATLAS.root_0
[2026-03-25 17:18:32] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 25 11:19 start_atlas.sh
[2026-03-25 17:18:32] -rw-r--r-- 2 whitlerd whitlerd    597540 Mar 25 11:19 input.tar.gz
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd 234433385 Mar 25 17:17 HITS.pool.root.1
[2026-03-25 17:18:32] -rw------- 1 whitlerd whitlerd   3624960 Mar 25 17:18 result.tar.gz
17:18:33 (3416385): run_atlas exited; CPU time 84915.168988
17:18:33 (3416385): called boinc_finish(0)

</stderr_txt>
]]>

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