Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-26 14:39:49 (18268): vboxwrapper version 26210
2026-03-26 14:39:49 (18268): BOINC client version: 7.24.1
2026-03-26 14:39:50 (18268): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2026-03-26 14:39:50 (18268): Successfully copied 'init_data.xml' to the shared directory.
2026-03-26 14:39:50 (18268): Create VM. (boinc_76d49328dd3dc47c, slot#13)
2026-03-26 14:39:51 (18268): Setting Memory Size for VM. (4800MB)
2026-03-26 14:39:51 (18268): Setting CPU Count for VM. (8)
2026-03-26 14:39:51 (18268): Setting Chipset Options for VM.
2026-03-26 14:39:51 (18268): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-26 14:39:52 (18268): Setting Boot Options for VM.
2026-03-26 14:39:52 (18268): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-26 14:39:53 (18268): Enabling VM Network Access.
2026-03-26 14:39:53 (18268): Disabling USB Support for VM.
2026-03-26 14:39:53 (18268): Disabling COM Port Support for VM.
2026-03-26 14:39:53 (18268): Disabling LPT Port Support for VM.
2026-03-26 14:39:54 (18268): Disabling Audio Support for VM.
2026-03-26 14:39:54 (18268): Disabling Clipboard Support for VM.
2026-03-26 14:39:54 (18268): Disabling Drag and Drop Support for VM.
2026-03-26 14:39:54 (18268): Adding storage controller(s) to VM.
2026-03-26 14:39:55 (18268): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-26 14:39:57 (18268): Adding VirtualBox Guest Additions to VM.
2026-03-26 14:39:57 (18268): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-26 14:39:57 (18268): forwarding host port 55099 to guest port 80
2026-03-26 14:39:58 (18268): Enabling remote desktop for VM.
2026-03-26 14:39:58 (18268): Required extension pack not installed, remote desktop not enabled.
2026-03-26 14:39:58 (18268): Enabling shared directory for VM.
2026-03-26 14:39:58 (18268): Starting VM using VBoxManage interface. (boinc_76d49328dd3dc47c, slot#13)
2026-03-26 14:40:06 (18268): Successfully started VM. (PID = '23696')
2026-03-26 14:40:06 (18268): Reporting VM Process ID to BOINC.
2026-03-26 14:40:06 (18268): Guest Log: BIOS: VirtualBox 7.0.12
2026-03-26 14:40:06 (18268): Guest Log: CPUID EDX: 0x178bfbff
2026-03-26 14:40:06 (18268): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-26 14:40:06 (18268): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-26 14:40:06 (18268): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-26 14:40:06 (18268): Detected: Web Application Enabled (http://localhost:55099)
2026-03-26 14:40:06 (18268): Preference change detected
2026-03-26 14:40:06 (18268): Setting CPU throttle for VM. (90%)
2026-03-26 14:40:06 (18268): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-26 14:40:08 (18268): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-26 14:40:08 (18268): Guest Log: BIOS: Booting from Hard Disk...
2026-03-26 14:40:11 (18268): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-26 14:40:11 (18268): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-26 14:40:11 (18268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-26 14:40:20 (18268): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-26 14:40:20 (18268): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-26 14:40:30 (18268): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-26 14:40:30 (18268): Guest Log: 00:00:00.000216 main     Log opened 2026-03-26T14:40:29.242911000Z
2026-03-26 14:40:30 (18268): Guest Log: 00:00:00.000669 main     OS Product: Linux
2026-03-26 14:40:30 (18268): Guest Log: 00:00:00.000827 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-26 14:40:30 (18268): Guest Log: 00:00:00.000910 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-26 14:40:30 (18268): Guest Log: 00:00:00.000963 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-26 14:40:30 (18268): Guest Log: 00:00:00.000965 main     Process ID: 1373
2026-03-26 14:40:30 (18268): Guest Log: 00:00:00.000966 main     Package type: LINUX_64BITS_GENERIC
2026-03-26 14:40:30 (18268): Guest Log: 00:00:00.003896 main     5.2.32 r132073 started. Verbose level = 0
2026-03-26 14:40:31 (18268): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-26 14:40:31 (18268): Guest Log: [INFO] Mounting shared directory
2026-03-26 14:40:31 (18268): Guest Log: [INFO] Checking for init_data.xml
2026-03-26 14:40:37 (18268): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-26 14:40:37 (18268): Guest Log: [INFO] Detected branch: prod
2026-03-26 14:40:37 (18268): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-26 14:40:37 (18268): Guest Log: Copying input files
2026-03-26 14:40:39 (18268): Guest Log: Copied input files into RunAtlas.
2026-03-26 14:40:39 (18268): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-26 14:40:39 (18268): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-26 14:40:39 (18268): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-26 14:40:39 (18268): Guest Log: Further information can be found at the LHC@home message board.
2026-03-26 14:40:40 (18268): Guest Log: 00:00:10.009706 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 809 714 000ns (GuestNow=1 774 532 440 441 797 000 ns GuestLast=1 774 536 029 251 511 000 ns fSetTimeLastLoop=true )
2026-03-26 14:40:49 (18268): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-26 14:40:49 (18268): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-26 14:40:49 (18268): Guest Log: 2.6.3.0 1650 0 30008 157721 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-26 14:40:51 (18268): Guest Log: copied the webapp to /var/www
2026-03-26 14:40:51 (18268): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-26 14:40:51 (18268): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-26 14:40:52 (18268): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-26 14:40:52 (18268): Guest Log:  *** Starting ATLAS job. (PandaID=7065224436 taskID=49178217) ***
2026-03-26 14:44:10 (18268): VM state change detected. (old = 'running', new = 'paused')
2026-03-26 14:44:30 (18268): VM state change detected. (old = 'paused', new = 'running')
2026-03-26 16:20:35 (18268): Status Report: Elapsed Time: '6000.000000'
2026-03-26 16:20:35 (18268): Status Report: CPU Time: '32995.765625'
2026-03-26 17:44:18 (18268): VM state change detected. (old = 'running', new = 'paused')
2026-03-26 17:44:38 (18268): VM state change detected. (old = 'paused', new = 'running')
2026-03-26 18:01:05 (18268): Status Report: Elapsed Time: '12000.000000'
2026-03-26 18:01:05 (18268): Status Report: CPU Time: '72779.859375'
2026-03-26 19:41:13 (18268): Status Report: Elapsed Time: '18000.000000'
2026-03-26 19:41:13 (18268): Status Report: CPU Time: '112217.125000'
2026-03-26 20:19:20 (18268): VM state change detected. (old = 'running', new = 'paused')
2026-03-26 20:19:40 (18268): VM state change detected. (old = 'paused', new = 'running')
2026-03-26 20:30:03 (18268): VM state change detected. (old = 'running', new = 'paused')
2026-03-27 08:00:01 (18268): VM state change detected. (old = 'paused', new = 'running')
2026-03-27 08:00:05 (18268): Guest Log: 05:48:46.449426 timesync vgsvcTimeSyncWorker: Radical host time change: 41 408 181 000 000ns (HostNow=1 774 594 804 629 000 000 ns HostLast=1 774 553 396 448 000 000 ns)
2026-03-27 08:00:15 (18268): Guest Log: 05:48:56.450560 timesync vgsvcTimeSyncWorker: Radical guest time change: 41 457 872 206 000ns (GuestNow=1 774 594 814 691 960 000 ns GuestLast=1 774 553 356 819 754 000 ns fSetTimeLastLoop=true )
2026-03-27 08:13:01 (18268): VM state change detected. (old = 'running', new = 'paused')
2026-03-27 08:13:21 (18268): VM state change detected. (old = 'paused', new = 'running')
2026-03-27 08:52:02 (18268): Status Report: Elapsed Time: '24000.000000'
2026-03-27 08:52:02 (18268): Status Report: CPU Time: '151153.734375'
2026-03-27 09:51:37 (18268): Guest Log:  *** Job finished ***
2026-03-27 09:51:37 (18268): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:50:59,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:50:59,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:08,147 | INFO     | [monitor] cgroup control has ended
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:10,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445704476480)>', '<ExcThread(monitor, started 140444885313280)>']
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:10,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:10,766 | INFO     | [monitor] control thread has ended
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,501 | INFO     | all workflow threads have been joined
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,502 | INFO     | end of generic workflow (traces error code: 0)
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,502 | INFO     | traces error code: 0
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,693 [wrapper] ==== pilot stdout END ====
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,700 [wrapper] ==== wrapper stdout RESUME ====
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,707 [wrapper] pilotpid: 6104
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,714 [wrapper] Pilot exit status: 0
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,853 [wrapper] pandaids: 7065224436
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,924 [wrapper] cleanup supervisor_pilot 32509 6105
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,933 [wrapper] Test setup, not cleaning
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,940 [wrapper] apfmon messages muted
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,944 [wrapper] ==== wrapper stdout END ====
2026-03-27 09:51:37 (18268): Guest Log: 2026-03-27 08:51:15,949 [wrapper] ==== wrapper stderr END ====
2026-03-27 09:51:37 (18268): Guest Log:  *** Error codes and diagnostics ***
2026-03-27 09:51:37 (18268): Guest Log:     "exeErrorCode": 0,
2026-03-27 09:51:37 (18268): Guest Log:     "exeErrorDiag": "",
2026-03-27 09:51:37 (18268): Guest Log:     "pilotErrorCode": 0,
2026-03-27 09:51:37 (18268): Guest Log:     "pilotErrorDiag": "",
2026-03-27 09:51:37 (18268): Guest Log:  *** Listing of results directory ***
2026-03-27 09:51:37 (18268): Guest Log: total 258784
2026-03-27 09:51:37 (18268): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 25 11:56 runpilot2-wrapper.sh
2026-03-27 09:51:37 (18268): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 25 11:57 pilot3.tar.gz
2026-03-27 09:51:37 (18268): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 25 11:59 queuedata.json
2026-03-27 09:51:37 (18268): Guest Log: -rwxr-xr-x. 1 atlas atlas      9192 Mar 26 13:40 init_data.xml
2026-03-27 09:51:37 (18268): Guest Log: -rwxr-xr-x. 1 atlas atlas    597553 Mar 26 13:40 input.tar.gz
2026-03-27 09:51:37 (18268): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 26 13:40 start_atlas.sh
2026-03-27 09:51:37 (18268): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 26 13:40 EVNT.49128307._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-27 09:51:37 (18268): Guest Log: -rw-r--r--. 1 atlas atlas      2610 Mar 26 13:40 pandaJob.out
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas   1011816 Mar 26 13:43 agis_schedconf.cvmfs.json
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas       438 Mar 26 13:43 workernode_map.json
2026-03-27 09:51:37 (18268): Guest Log: drwx------. 5 atlas atlas      4096 Mar 26 13:43 pilot3
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas 252391226 Mar 27 08:49 HITS.49178217._000814.pool.root.1
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas        98 Mar 27 08:50 pilot_heartbeat.json
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas      1032 Mar 27 08:50 memory_monitor_summary.json
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 27 08:50 agis_ddmendpoints.agis.ALL.json
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas    651400 Mar 27 08:50 log.49178217._000814.job.log.tgz.1
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas      6379 Mar 27 08:50 heartbeat.json
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 27 08:51 pilotlog.txt
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas   3714569 Mar 27 08:51 log.49178217._000814.job.log.1
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas       357 Mar 27 08:51 output.list
2026-03-27 09:51:37 (18268): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 27 08:51 runtime_log
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas   4382720 Mar 27 08:51 result.tar.gz
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas       661 Mar 27 08:51 YDxMDmT1bP9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNTCMDmltHj9m.diag
2026-03-27 09:51:37 (18268): Guest Log: -rw-r--r--. 1 atlas atlas      8755 Mar 27 08:51 runtime_log.err
2026-03-27 09:51:37 (18268): Guest Log: Looking for outputfile HITS.49178217._000814.pool.root.1
2026-03-27 09:51:37 (18268): Guest Log: HITS file was successfully produced
2026-03-27 09:51:37 (18268): Guest Log: -rw-------. 1 atlas atlas 252391226 Mar 27 08:49 /home/atlas/RunAtlas/HITS.49178217._000814.pool.root.1
2026-03-27 09:51:39 (18268): Guest Log: Successfully finished the ATLAS job!
2026-03-27 09:51:39 (18268): Guest Log: Copying the results back to the shared directory!
2026-03-27 09:51:39 (18268): Guest Log:  *** Contents of shared directory: ***
2026-03-27 09:51:39 (18268): Guest Log: total 488360
2026-03-27 09:51:39 (18268): Guest Log: -rwxrwxrwx. 1 root root 242677102 Mar 26 13:39 ATLAS.root_0
2026-03-27 09:51:39 (18268): Guest Log: -rwxrwxrwx. 1 root root 252391226 Mar 27  2026 HITS.pool.root.1
2026-03-27 09:51:39 (18268): Guest Log: -rwxrwxrwx. 1 root root      9192 Mar 26 13:39 init_data.xml
2026-03-27 09:51:39 (18268): Guest Log: -rwxrwxrwx. 1 root root    597553 Mar 25 19:05 input.tar.gz
2026-03-27 09:51:39 (18268): Guest Log: -rwxrwxrwx. 1 root root   4382720 Mar 27  2026 result.tar.gz
2026-03-27 09:51:39 (18268): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 25 19:05 start_atlas.sh
2026-03-27 09:51:39 (18268): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-27 09:51:39 (18268): VM Completion File Detected.
2026-03-27 09:51:39 (18268): Powering off VM.
2026-03-27 09:51:40 (18268): Successfully stopped VM.
2026-03-27 09:51:40 (18268): Deregistering VM. (boinc_76d49328dd3dc47c, slot#13)
2026-03-27 09:51:40 (18268): Removing network bandwidth throttle group from VM.
2026-03-27 09:51:40 (18268): Removing VM from VirtualBox.
2026-03-27 09:51:45 (18268): called boinc_finish(0)

</stderr_txt>
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