Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:36:10 (31593): wrapper (7.7.26015): starting
14:36:10 (31593): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 14:36:10] Arguments: --nthreads 8
[2026-03-25 14:36:10] Threads: 8
[2026-03-25 14:36:10] Checking for CVMFS
[2026-03-25 14:36:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 14:36:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 14:36:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 14:36:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 14:36:10] 2.11.0.0 4525 143573 84796 157685 3 1 2747400 4096001 0 130560 2 16742082 99.649 9227089 348 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 14:36:10] CVMFS is ok
[2026-03-25 14:36:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 14:36:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 14:36:10] Further information can be found at the LHC@home message board.
[2026-03-25 14:36:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 14:36:10] Checking for apptainer binary...
[2026-03-25 14:36:10] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 14:36:10] apptainer is not installed, using version from CVMFS
[2026-03-25 14:36:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 14:36:11] WARNING: Environment variable TMPDIR already has value [/tmp/job_11393537/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node047
[2026-03-25 14:36:11] apptainer works
[2026-03-25 14:36:11] Set ATHENA_PROC_NUMBER=8
[2026-03-25 14:36:11] Set ATHENA_CORE_NUMBER=8
[2026-03-25 14:36:11] Starting ATLAS job with PandaID=7057073527
[2026-03-25 14:36:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11393537/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 16:35:40]  *** The last 200 lines of the pilot log: ***
[2026-03-25 16:35:40] 2026-03-25 15:34:53,396 | INFO     | total number of processed events: 400 (read)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,414 | INFO     | using path: /tmp/job_11393537/atlas/pilot/slots/0/PanDA_Pilot-7057073527/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,414 | INFO     | extracted standard info from prmon json
[2026-03-25 16:35:40] 2026-03-25 15:34:53,414 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 16:35:40] 2026-03-25 15:34:53,414 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 16:35:40] 2026-03-25 15:34:53,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 16:35:40] 2026-03-25 15:34:53,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 16:35:40] 2026-03-25 15:34:53,415 | INFO     | fitting pss+swap vs Time
[2026-03-25 16:35:40] 2026-03-25 15:34:53,415 | INFO     | sum of square deviations: 496597218.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | sum of deviations: -25259531541.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | mean x: 1774449338.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | mean y: 2604459.717948718
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | intersect: 90260377553.23851
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | chi2: 1.94990712139864
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | sum of square deviations: 435610028.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | sum of deviations: -16535913458.500002
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | mean x: 1774449185.5
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | mean y: 2625639.526785714
[2026-03-25 16:35:40] 2026-03-25 15:34:53,416 | INFO     | intersect: 67361355425.09044
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | chi2: 1.275938710632541
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | current chi2=1.275938710632541 (change=34.56412889464557 %)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | sum of square deviations: 379832238.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | sum of deviations: -15311557356.999996
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | mean x: 1774449033.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | mean y: 2628989.2523364485
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | intersect: 71533098042.94197
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | chi2: 1.2690356942519063
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | current chi2=1.2690356942519063 (change=0.5410147308104314 %)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | right removable region: 106
[2026-03-25 16:35:40] 2026-03-25 15:34:53,417 | INFO     | sum of square deviations: 435610028.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | sum of deviations: -35656799029.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | mean x: 1774449490.5
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | mean y: 2629549.964285714
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | intersect: 145249948947.9235
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | chi2: 0.8626889400729713
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | current chi2=0.8626889400729713 (change=55.75743425901347 %)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | sum of square deviations: 379832238.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | sum of deviations: -30376616459.000004
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | mean x: 1774449643.0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | mean y: 2615082.6728971964
[2026-03-25 16:35:40] 2026-03-25 15:34:53,418 | INFO     | intersect: 141912044664.1095
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | chi2: 0.8584058620013396
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | current chi2=0.8584058620013396 (change=0.49648000254522257 %)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | left removable region: 20
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | sum of square deviations: 197203697.5
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | sum of deviations: -10788896241.5
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | mean x: 1774449612.5
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | mean y: 2605094.7790697673
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | intersect: 97081681185.79597
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | chi2: 0.09853350606400778
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | current memory leak: -54.71 B/s (using 86 data points, chi2=0.10)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | could have reported an average CPU frequency of 2425 MHz (7 samples)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | ..............................
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | . Timing measurements:
[2026-03-25 16:35:40] 2026-03-25 15:34:53,419 | INFO     | . get job = 0 s
[2026-03-25 16:35:40] 2026-03-25 15:34:53,420 | INFO     | . initial setup = 2 s
[2026-03-25 16:35:40] 2026-03-25 15:34:53,420 | INFO     | . payload setup = 3 s
[2026-03-25 16:35:40] 2026-03-25 15:34:53,420 | INFO     | . stage-in = 0 s
[2026-03-25 16:35:40] 2026-03-25 15:34:53,420 | INFO     | . payload execution = 7087 s
[2026-03-25 16:35:40] 2026-03-25 15:34:53,420 | INFO     | . stage-out = 0 s
[2026-03-25 16:35:40] 2026-03-25 15:34:53,420 | INFO     | . log creation = 0 s
[2026-03-25 16:35:40] 2026-03-25 15:34:53,420 | INFO     | ..............................
[2026-03-25 16:35:40] 2026-03-25 15:34:53,467 | INFO     | 
[2026-03-25 16:35:40] 2026-03-25 15:34:53,467 | INFO     | job summary report
[2026-03-25 16:35:40] 2026-03-25 15:34:53,467 | INFO     | --------------------------------------------------
[2026-03-25 16:35:40] 2026-03-25 15:34:53,467 | INFO     | PanDA job id: 7057073527
[2026-03-25 16:35:40] 2026-03-25 15:34:53,467 | INFO     | task id: 49176275
[2026-03-25 16:35:40] 2026-03-25 15:34:53,467 | INFO     | errors: (none)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | pilot state: finished 
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | transexitcode: 0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | exeerrorcode: 0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | exeerrordiag: 
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | exitcode: 0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | exitmsg: OK
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | cpuconsumptiontime: 52120 s
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | nevents: 400
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | neventsw: 0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | pid: 8467
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | pgrp: 8467
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | corecount: 8
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | event service: False
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | sizes: {0: 2280424, 11: 2280424, 7094: 2307882, 7095: 2316910, 7098: 2316966, 7099: 2317160}
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | --------------------------------------------------
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | 
[2026-03-25 16:35:40] 2026-03-25 15:34:53,468 | INFO     | executing command: ls -lF /tmp/job_11393537/atlas/pilot/slots/0
[2026-03-25 16:35:40] 2026-03-25 15:34:53,477 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,477 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,477 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,477 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | job 7057073527 has completed (purged errors)
[2026-03-25 16:35:40] 2026-03-25 15:34:53,478 | INFO     | overall cleanup function is called
[2026-03-25 16:35:40] 2026-03-25 15:34:54,484 | INFO     | --- collectZombieJob: --- 10, [8467]
[2026-03-25 16:35:40] 2026-03-25 15:34:54,484 | INFO     | zombie collector waiting for pid 8467
[2026-03-25 16:35:40] 2026-03-25 15:34:54,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 16:35:40] 2026-03-25 15:34:54,484 | INFO     | collected zombie processes
[2026-03-25 16:35:40] 2026-03-25 15:34:54,484 | INFO     | will attempt to kill all subprocesses of pid=8467
[2026-03-25 16:35:40] 2026-03-25 15:34:54,578 | INFO     | process IDs to be killed: [8467] (in reverse order)
[2026-03-25 16:35:40] 2026-03-25 15:34:54,611 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 16:35:40] 2026-03-25 15:34:54,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 16:35:40] 2026-03-25 15:34:54,615 | INFO     | did not find any defunct processes belonging to 8467
[2026-03-25 16:35:40] 2026-03-25 15:34:54,618 | INFO     | did not find any defunct processes belonging to 8467
[2026-03-25 16:35:40] 2026-03-25 15:34:54,618 | INFO     | ready for new job
[2026-03-25 16:35:40] 2026-03-25 15:34:54,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 16:35:40] 2026-03-25 15:34:54,619 | INFO     | **************************************
[2026-03-25 16:35:40] 2026-03-25 15:34:54,619 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 16:35:40] 2026-03-25 15:34:54,619 | INFO     | **************************************
[2026-03-25 16:35:40] 2026-03-25 15:34:54,619 | INFO     | 
[2026-03-25 16:35:40] 2026-03-25 15:34:54,633 | INFO     | architecture information:
[2026-03-25 16:35:40] 2026-03-25 15:34:54,633 | INFO     | executing command: cat /etc/os-release
[2026-03-25 16:35:40] 2026-03-25 15:34:54,640 | INFO     | cat /etc/os-release:
[2026-03-25 16:35:40] NAME="CentOS Linux"
[2026-03-25 16:35:40] VERSION="7 (Core)"
[2026-03-25 16:35:40] ID="centos"
[2026-03-25 16:35:40] ID_LIKE="rhel fedora"
[2026-03-25 16:35:40] VERSION_ID="7"
[2026-03-25 16:35:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 16:35:40] ANSI_COLOR="0;31"
[2026-03-25 16:35:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 16:35:40] HOME_URL="https://www.centos.org/"
[2026-03-25 16:35:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 16:35:40] 
[2026-03-25 16:35:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 16:35:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 16:35:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 16:35:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 16:35:40] 
[2026-03-25 16:35:40] 2026-03-25 15:34:54,640 | INFO     | **************************************
[2026-03-25 16:35:40] 2026-03-25 15:34:55,143 | INFO     | executing command: df -mP /tmp/job_11393537/atlas/pilot/slots/0
[2026-03-25 16:35:40] 2026-03-25 15:34:55,150 | INFO     | sufficient remaining disk space (226839494656 B)
[2026-03-25 16:35:40] 2026-03-25 15:34:55,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 16:35:40] 2026-03-25 15:34:55,150 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 16:35:40] 2026-03-25 15:34:55,150 | INFO     | update_server=False
[2026-03-25 16:35:40] 2026-03-25 15:34:55,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 16:35:40] 2026-03-25 15:34:55,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 16:35:40] 2026-03-25 15:34:55,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 16:35:40] 2026-03-25 15:34:55,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 16:35:40] 2026-03-25 15:34:55,183 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 16:35:40] 2026-03-25 15:34:55,183 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 16:35:40] 2026-03-25 15:34:55,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 16:35:40] 2026-03-25 15:34:55,183 | INFO     | will abort loop
[2026-03-25 16:35:40] 2026-03-25 15:34:55,464 | INFO     | all payload control threads have been joined
[2026-03-25 16:35:40] 2026-03-25 15:34:55,815 | INFO     | all data control threads have been joined
[2026-03-25 16:35:40] 2026-03-25 15:34:56,153 | INFO     | [job] retrieve thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:56,155 | INFO     | [job] queue monitor thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:56,188 | INFO     | [job] job monitor thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:56,221 | INFO     | [payload] validate_post thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:56,329 | INFO     | [payload] failed_post thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:56,469 | INFO     | [payload] control thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:56,603 | INFO     | all job control threads have been joined
[2026-03-25 16:35:40] 2026-03-25 15:34:56,712 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:56,819 | INFO     | [job] validate thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:56,820 | INFO     | [data] control thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:56,922 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:57,154 | INFO     | [data] copytool_in thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:57,155 | INFO     | [data] copytool_out thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:57,277 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:57,608 | INFO     | [job] control thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:34:59,155 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:35:05,829 | INFO     | job.realtimelogging is not enabled
[2026-03-25 16:35:40] 2026-03-25 15:35:06,834 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 16:35:40] 2026-03-25 15:35:25,381 | INFO     | PID=3375 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-25 16:35:40] 2026-03-25 15:35:25,381 | INFO     | .. there are 2 such processes running
[2026-03-25 16:35:40] 2026-03-25 15:35:25,382 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 16:35:40] 2026-03-25 15:35:25,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 16:35:40] 2026-03-25 15:35:25,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 16:35:40] 2026-03-25 15:35:34,375 | INFO     | [monitor] cgroup control has ended
[2026-03-25 16:35:40] 2026-03-25 15:35:35,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067393280)>']
[2026-03-25 16:35:40] 2026-03-25 15:35:36,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 16:35:40] 2026-03-25 15:35:36,437 | INFO     | [monitor] control thread has ended
[2026-03-25 16:35:40] 2026-03-25 15:35:40,525 | INFO     | all workflow threads have been joined
[2026-03-25 16:35:40] 2026-03-25 15:35:40,525 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 16:35:40] 2026-03-25 15:35:40,525 | INFO     | traces error code: 0
[2026-03-25 16:35:40] 2026-03-25 15:35:40,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 16:35:40] 2026-03-25 15:35:40,575 [wrapper] ==== pilot stdout END ====
[2026-03-25 16:35:40] 2026-03-25 15:35:40,576 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 16:35:40] 2026-03-25 15:35:40,578 [wrapper] pilotpid: 3375
[2026-03-25 16:35:40] 2026-03-25 15:35:40,579 [wrapper] Pilot exit status: 0
[2026-03-25 16:35:40] 2026-03-25 15:35:40,582 [wrapper] pandaids: 7057073527
[2026-03-25 16:35:40] 2026-03-25 15:35:40,603 [wrapper] cleanup supervisor_pilot 32076 3376
[2026-03-25 16:35:40] 2026-03-25 15:35:40,605 [wrapper] Test setup, not cleaning
[2026-03-25 16:35:40] 2026-03-25 15:35:40,606 [wrapper] apfmon messages muted
[2026-03-25 16:35:40] 2026-03-25 15:35:40,607 [wrapper] ==== wrapper stdout END ====
[2026-03-25 16:35:40] 2026-03-25 15:35:40,608 [wrapper] ==== wrapper stderr END ====
[2026-03-25 16:35:40]  *** Error codes and diagnostics ***
[2026-03-25 16:35:40]     "exeErrorCode": 0,
[2026-03-25 16:35:40]     "exeErrorDiag": "",
[2026-03-25 16:35:40]     "pilotErrorCode": 0,
[2026-03-25 16:35:40]     "pilotErrorDiag": "",
[2026-03-25 16:35:40]  *** Listing of results directory ***
[2026-03-25 16:35:40] total 468412
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user    585013 Mar 17 01:55 pilot3.tar.gz
[2026-03-25 16:35:40] -rwx------ 1 mf493845 unix-user     36322 Mar 17 01:58 runpilot2-wrapper.sh
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user      5111 Mar 17 02:00 queuedata.json
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user       100 Mar 25 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 16:35:40] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 13:34 run_atlas
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user       105 Mar 25 13:34 job.xml
[2026-03-25 16:35:40] -rw-r--r-- 2 mf493845 unix-user 242260038 Mar 25 14:36 EVNT.49133299._000005.pool.root.1
[2026-03-25 16:35:40] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 14:36 start_atlas.sh
[2026-03-25 16:35:40] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 14:36 shared
[2026-03-25 16:35:40] -rw-r--r-- 2 mf493845 unix-user    597543 Mar 25 14:36 input.tar.gz
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user      6390 Mar 25 14:36 init_data.xml
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user         0 Mar 25 14:36 boinc_setup_complete
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user      8192 Mar 25 14:36 boinc_mmap_file
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user         0 Mar 25 14:36 boinc_lockfile
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user      2611 Mar 25 14:36 pandaJob.out
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user   1011913 Mar 25 14:36 agis_schedconf.cvmfs.json
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user   1511579 Mar 25 14:36 agis_ddmendpoints.agis.ALL.json
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user       416 Mar 25 14:36 workernode_map.json
[2026-03-25 16:35:40] drwx------ 5 mf493845 unix-user       440 Mar 25 14:36 pilot3
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user 230665529 Mar 25 16:34 HITS.49176275._000117.pool.root.1
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user      1022 Mar 25 16:34 memory_monitor_summary.json
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user    364801 Mar 25 16:34 log.49176275._000117.job.log.tgz.1
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user        95 Mar 25 16:34 pilot_heartbeat.json
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user      6309 Mar 25 16:34 heartbeat.json
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user      5088 Mar 25 16:35 pilotlog.txt
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user   1040059 Mar 25 16:35 log.49176275._000117.job.log.1
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user       357 Mar 25 16:35 output.list
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user       620 Mar 25 16:35 runtime_log
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user   1423360 Mar 25 16:35 result.tar.gz
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user       646 Mar 25 16:35 ynwLDmSwXM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtbzLDmtL2uzn.diag
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user      9219 Mar 25 16:35 runtime_log.err
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user     21460 Mar 25 16:35 stderr.txt
[2026-03-25 16:35:40] HITS file was successfully produced:
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user 230665529 Mar 25 16:34 shared/HITS.pool.root.1
[2026-03-25 16:35:40]  *** Contents of shared directory: ***
[2026-03-25 16:35:40] total 463836
[2026-03-25 16:35:40] -rw-r--r-- 2 mf493845 unix-user 242260038 Mar 25 14:36 ATLAS.root_0
[2026-03-25 16:35:40] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 14:36 start_atlas.sh
[2026-03-25 16:35:40] -rw-r--r-- 2 mf493845 unix-user    597543 Mar 25 14:36 input.tar.gz
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user 230665529 Mar 25 16:34 HITS.pool.root.1
[2026-03-25 16:35:40] -rw------- 1 mf493845 unix-user   1423360 Mar 25 16:35 result.tar.gz
16:35:42 (31593): run_atlas exited; CPU time 52199.092632
16:35:42 (31593): called boinc_finish(0)

</stderr_txt>
]]>

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