Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:37:15 (778708): wrapper (7.7.26015): starting
04:37:15 (778708): wrapper: running run_atlas (--nthreads 3)
[2026-03-27 04:37:15] Arguments: --nthreads 3
[2026-03-27 04:37:15] Threads: 3
[2026-03-27 04:37:15] Checking for CVMFS
[2026-03-27 04:37:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-27 04:37:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-27 04:37:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-27 04:37:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-27 04:37:15] 2.9.2.0 232885 6505 88672 157744 3 50 27216072 36864001 0 130560 0 2087087 99.979 229576 8590 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-27 04:37:15] CVMFS is ok
[2026-03-27 04:37:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-27 04:37:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-27 04:37:15] Further information can be found at the LHC@home message board.
[2026-03-27 04:37:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-27 04:37:15] Checking for apptainer binary...
[2026-03-27 04:37:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-27 04:37:15] Running /usr/bin/apptainer --version
[2026-03-27 04:37:15] apptainer version 1.4.1-1.1
[2026-03-27 04:37:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-27 04:37:15] thA325a
[2026-03-27 04:37:15] apptainer works
[2026-03-27 04:37:15] Set ATHENA_PROC_NUMBER=3
[2026-03-27 04:37:15] Set ATHENA_CORE_NUMBER=3
[2026-03-27 04:37:15] Starting ATLAS job with PandaID=7057107003
[2026-03-27 04:37:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-27 07:41:44]  *** The last 200 lines of the pilot log: ***
[2026-03-27 07:41:44] 2026-03-27 06:41:04,030 | INFO     | will abort loop
[2026-03-27 07:41:44] 2026-03-27 06:41:04,435 | INFO     | all data control threads have been joined
[2026-03-27 07:41:44] 2026-03-27 06:41:04,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-27 07:41:44] 2026-03-27 06:41:04,754 | INFO     | [job] retrieve thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:04,758 | INFO     | [job] queue monitor thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:04,990 | INFO     | all payload control threads have been joined
[2026-03-27 07:41:44] 2026-03-27 06:41:05,035 | INFO     | [job] job monitor thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,268 | INFO     | [job] create_data_payload thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,274 | INFO     | [job] validate thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,275 | INFO     | [payload] validate_pre thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,439 | INFO     | [payload] execute_payloads thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,440 | INFO     | [data] control thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,458 | INFO     | all job control threads have been joined
[2026-03-27 07:41:44] 2026-03-27 06:41:05,473 | INFO     | [data] copytool_in thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,715 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,769 | INFO     | [payload] validate_post thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,872 | INFO     | [payload] failed_post thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:05,996 | INFO     | [payload] control thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:06,463 | INFO     | [job] control thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:06,649 | INFO     | [data] copytool_out thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:07,760 | INFO     | [data] queue_monitor thread has finished
[2026-03-27 07:41:44] 2026-03-27 06:41:33,419 | INFO     | PID=782759 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-27 07:41:44] 2026-03-27 06:41:33,419 | INFO     | found 0 job(s) in 20 queues
[2026-03-27 07:41:44] 2026-03-27 06:41:33,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-27 07:41:44] 2026-03-27 06:41:33,420 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-27 07:41:44] 2026-03-27 06:41:38,166 | INFO     | [monitor] cgroup control has ended
[2026-03-27 07:41:44] 2026-03-27 06:41:39,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592403412800)>', '<ExcThread(monitor, started 140591392356096)>']
[2026-03-27 07:41:44] 2026-03-27 06:41:40,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-27 07:41:44] 2026-03-27 06:41:40,457 | INFO     | [monitor] control thread has ended
[2026-03-27 07:41:44] 2026-03-27 06:41:44,669 | INFO     | all workflow threads have been joined
[2026-03-27 07:41:44] 2026-03-27 06:41:44,670 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-27 07:41:44] 2026-03-27 06:41:44,670 | INFO     | traces error code: 0
[2026-03-27 07:41:44] 2026-03-27 06:41:44,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-27 07:41:44] 2026-03-27 06:41:44,721 [wrapper] ==== pilot stdout END ====
[2026-03-27 07:41:44] 2026-03-27 06:41:44,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-27 07:41:44] 2026-03-27 06:41:44,726 [wrapper] pilotpid: 782759
[2026-03-27 07:41:44] 2026-03-27 06:41:44,728 [wrapper] Pilot exit status: 0
[2026-03-27 07:41:44] 2026-03-27 06:41:44,735 [wrapper] pandaids: 7057107003
[2026-03-27 07:41:44] 2026-03-27 06:41:44,751 [wrapper] cleanup supervisor_pilot  793411 782760
[2026-03-27 07:41:44] 2026-03-27 06:41:44,753 [wrapper] Test setup, not cleaning
[2026-03-27 07:41:44] 2026-03-27 06:41:44,756 [wrapper] apfmon messages muted
[2026-03-27 07:41:44] 2026-03-27 06:41:44,758 [wrapper] ==== wrapper stdout END ====
[2026-03-27 07:41:44] 2026-03-27 06:41:44,760 [wrapper] ==== wrapper stderr END ====
[2026-03-27 07:41:44]  *** Error codes and diagnostics ***
[2026-03-27 07:41:44]     "exeErrorCode": 0,
[2026-03-27 07:41:44]     "exeErrorDiag": "",
[2026-03-27 07:41:44]     "pilotErrorCode": 0,
[2026-03-27 07:41:44]     "pilotErrorDiag": "",
[2026-03-27 07:41:44]  *** Listing of results directory ***
[2026-03-27 07:41:44] total 434980
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc    585013 Mar 17 01:55 pilot3.tar.gz
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc      5111 Mar 17 01:56 queuedata.json
[2026-03-27 07:41:44] -rwx------ 1 boinc boinc     36322 Mar 17 01:56 runpilot2-wrapper.sh
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc       100 Mar 27 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-27 07:41:44] -rwxr-xr-x 1 boinc boinc      7986 Mar 27 04:37 run_atlas
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc       105 Mar 27 04:37 job.xml
[2026-03-27 07:41:44] -rw-r--r-- 2 boinc boinc 229365849 Mar 27 04:37 EVNT.49133369._000009.pool.root.1
[2026-03-27 07:41:44] -rw-r--r-- 2 boinc boinc    597541 Mar 27 04:37 input.tar.gz
[2026-03-27 07:41:44] -rw-r--r-- 2 boinc boinc     15845 Mar 27 04:37 start_atlas.sh
[2026-03-27 07:41:44] drwxrwx--x 2 boinc boinc      4096 Mar 27 04:37 shared
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc         0 Mar 27 04:37 boinc_setup_complete
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc      6439 Mar 27 04:37 init_data.xml
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc         0 Mar 27 04:37 boinc_lockfile
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc      2616 Mar 27 04:37 pandaJob.out
[2026-03-27 07:41:44] -rw------- 1 boinc boinc   1012410 Mar 27 04:37 agis_schedconf.cvmfs.json
[2026-03-27 07:41:44] -rw------- 1 boinc boinc       418 Mar 27 04:37 workernode_map.json
[2026-03-27 07:41:44] drwx------ 5 boinc boinc      4096 Mar 27 04:37 pilot3
[2026-03-27 07:41:44] -rw------- 1 boinc boinc 208309008 Mar 27 07:40 HITS.49176293._000219.pool.root.1
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc       530 Mar 27 07:40 boinc_task_state.xml
[2026-03-27 07:41:44] -rw------- 1 boinc boinc      1020 Mar 27 07:40 memory_monitor_summary.json
[2026-03-27 07:41:44] -rw------- 1 boinc boinc   1511579 Mar 27 07:41 agis_ddmendpoints.agis.ALL.json
[2026-03-27 07:41:44] -rw------- 1 boinc boinc    348227 Mar 27 07:41 log.49176293._000219.job.log.tgz.1
[2026-03-27 07:41:44] -rw------- 1 boinc boinc      6319 Mar 27 07:41 heartbeat.json
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc        28 Mar 27 07:41 wrapper_checkpoint.txt
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc      8192 Mar 27 07:41 boinc_mmap_file
[2026-03-27 07:41:44] -rw------- 1 boinc boinc        95 Mar 27 07:41 pilot_heartbeat.json
[2026-03-27 07:41:44] -rw------- 1 boinc boinc      4933 Mar 27 07:41 pilotlog.txt
[2026-03-27 07:41:44] -rw------- 1 boinc boinc   1560249 Mar 27 07:41 log.49176293._000219.job.log.1
[2026-03-27 07:41:44] -rw------- 1 boinc boinc       357 Mar 27 07:41 output.list
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc       620 Mar 27 07:41 runtime_log
[2026-03-27 07:41:44] -rw------- 1 boinc boinc   1925120 Mar 27 07:41 result.tar.gz
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc      8902 Mar 27 07:41 runtime_log.err
[2026-03-27 07:41:44] -rw------- 1 boinc boinc       661 Mar 27 07:41 U5lKDmtuXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbUwLDmfnsxHn.diag
[2026-03-27 07:41:44] -rw-r--r-- 1 boinc boinc      6804 Mar 27 07:41 stderr.txt
[2026-03-27 07:41:44] HITS file was successfully produced:
[2026-03-27 07:41:44] -rw------- 1 boinc boinc 208309008 Mar 27 07:40 shared/HITS.pool.root.1
[2026-03-27 07:41:44]  *** Contents of shared directory: ***
[2026-03-27 07:41:44] total 429908
[2026-03-27 07:41:44] -rw-r--r-- 2 boinc boinc 229365849 Mar 27 04:37 ATLAS.root_0
[2026-03-27 07:41:44] -rw-r--r-- 2 boinc boinc    597541 Mar 27 04:37 input.tar.gz
[2026-03-27 07:41:44] -rw-r--r-- 2 boinc boinc     15845 Mar 27 04:37 start_atlas.sh
[2026-03-27 07:41:44] -rw------- 1 boinc boinc 208309008 Mar 27 07:40 HITS.pool.root.1
[2026-03-27 07:41:44] -rw------- 1 boinc boinc   1925120 Mar 27 07:41 result.tar.gz
07:41:46 (778708): run_atlas exited; CPU time 32086.597205
07:41:46 (778708): called boinc_finish(0)

</stderr_txt>
]]>

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