Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:28:05 (28569): wrapper (7.7.26015): starting
09:28:05 (28569): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 09:28:05] Arguments: --nthreads 8
[2026-03-26 09:28:05] Threads: 8
[2026-03-26 09:28:05] Checking for CVMFS
[2026-03-26 09:28:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 09:28:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 09:28:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 09:28:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 09:28:11] 2.11.2.0 1076 144617 131012 157713 0 53 20743543 25165824 4595 130560 154 53044735 99.821 43551648 1348 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-26 09:28:11] CVMFS is ok
[2026-03-26 09:28:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 09:28:11] Checking for apptainer binary...
[2026-03-26 09:28:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 09:28:11] Running /usr/bin/apptainer --version
[2026-03-26 09:28:11] apptainer version 1.3.2-1.el7
[2026-03-26 09:28:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 09:28:19] cg-vwn456.simple-grid.lan
[2026-03-26 09:28:19] apptainer works
[2026-03-26 09:28:19] Set ATHENA_PROC_NUMBER=8
[2026-03-26 09:28:19] Set ATHENA_CORE_NUMBER=8
[2026-03-26 09:28:19] Starting ATLAS job with PandaID=7057073644
[2026-03-26 09:28:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 19:48:42]  *** The last 200 lines of the pilot log: ***
[2026-03-26 19:48:42] 2026-03-26 18:47:41,456 | INFO     | job 7057073644 has finished - writing final server update
[2026-03-26 19:48:42] 2026-03-26 18:47:41,456 | INFO     | total number of processed events: 400 (read)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,458 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7057073644/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,459 | INFO     | extracted standard info from prmon json
[2026-03-26 19:48:42] 2026-03-26 18:47:41,459 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 19:48:42] 2026-03-26 18:47:41,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 19:48:42] 2026-03-26 18:47:41,459 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 19:48:42] 2026-03-26 18:47:41,459 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 19:48:42] 2026-03-26 18:47:41,470 | INFO     | fitting pss+swap vs Time
[2026-03-26 19:48:42] 2026-03-26 18:47:41,472 | INFO     | sum of square deviations: 66977813950.0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,486 | INFO     | sum of deviations: 241997292133.50006
[2026-03-26 19:48:42] 2026-03-26 18:47:41,486 | INFO     | mean x: 1774532558.5
[2026-03-26 19:48:42] 2026-03-26 18:47:41,486 | INFO     | mean y: 2494993.215
[2026-03-26 19:48:42] 2026-03-26 18:47:41,486 | INFO     | intersect: -6409062037.898461
[2026-03-26 19:48:42] 2026-03-26 18:47:41,487 | INFO     | chi2: 6.953314101750415
[2026-03-26 19:48:42] 2026-03-26 18:47:41,488 | INFO     | sum of square deviations: 65317280490.0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,486 | INFO     | time since job start (36853s) is within the limit (345600.0s)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,503 | INFO     | sum of deviations: 279837410940.00006
[2026-03-26 19:48:42] 2026-03-26 18:47:41,503 | INFO     | mean x: 1774532406.0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,503 | INFO     | mean y: 2498443.499159664
[2026-03-26 19:48:42] 2026-03-26 18:47:41,504 | INFO     | intersect: -7600092331.85002
[2026-03-26 19:48:42] 2026-03-26 18:47:41,504 | INFO     | chi2: 6.207131582980243
[2026-03-26 19:48:42] 2026-03-26 18:47:41,504 | INFO     | current chi2=6.207131582980243 (change=10.731321897026472 %)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,505 | INFO     | right removable region: 594
[2026-03-26 19:48:42] 2026-03-26 18:47:41,505 | INFO     | sum of square deviations: 65317280490.0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,520 | INFO     | sum of deviations: 29964337344.999954
[2026-03-26 19:48:42] 2026-03-26 18:47:41,521 | INFO     | mean x: 1774532711.0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,521 | INFO     | mean y: 2514458.9966386557
[2026-03-26 19:48:42] 2026-03-26 18:47:41,521 | INFO     | intersect: -811553370.8831125
[2026-03-26 19:48:42] 2026-03-26 18:47:41,522 | INFO     | chi2: 2.4079201294416372
[2026-03-26 19:48:42] 2026-03-26 18:47:41,522 | INFO     | current chi2=2.4079201294416372 (change=65.37018040310488 %)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,523 | INFO     | sum of square deviations: 63684421967.5
[2026-03-26 19:48:42] 2026-03-26 18:47:41,533 | INFO     | sum of deviations: -76534980989.5
[2026-03-26 19:48:42] 2026-03-26 18:47:41,533 | INFO     | mean x: 1774532863.5
[2026-03-26 19:48:42] 2026-03-26 18:47:41,533 | INFO     | mean y: 2524381.3847457627
[2026-03-26 19:48:42] 2026-03-26 18:47:41,534 | INFO     | intersect: 2135131301.2139814
[2026-03-26 19:48:42] 2026-03-26 18:47:41,534 | INFO     | chi2: 0.992084943591977
[2026-03-26 19:48:42] 2026-03-26 18:47:41,535 | INFO     | current chi2=0.992084943591977 (change=58.79909256699359 %)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,535 | INFO     | sum of square deviations: 62079005820.0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,555 | INFO     | sum of deviations: -70686056959.0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,556 | INFO     | mean x: 1774533016.0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,556 | INFO     | mean y: 2523820.6427350426
[2026-03-26 19:48:42] 2026-03-26 18:47:41,556 | INFO     | intersect: 2023090036.0280778
[2026-03-26 19:48:42] 2026-03-26 18:47:41,557 | INFO     | chi2: 0.9745717604102124
[2026-03-26 19:48:42] 2026-03-26 18:47:41,557 | INFO     | current chi2=0.9745717604102124 (change=1.7652906935927988 %)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,557 | INFO     | left removable region: 30
[2026-03-26 19:48:42] 2026-03-26 18:47:41,558 | INFO     | sum of square deviations: 55630680265.0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,574 | INFO     | sum of deviations: 25514455329.499996
[2026-03-26 19:48:42] 2026-03-26 18:47:41,574 | INFO     | mean x: 1774533290.5
[2026-03-26 19:48:42] 2026-03-26 18:47:41,575 | INFO     | mean y: 2521901.593971631
[2026-03-26 19:48:42] 2026-03-26 18:47:41,575 | INFO     | intersect: -811350050.9958012
[2026-03-26 19:48:42] 2026-03-26 18:47:41,575 | INFO     | chi2: 0.08916141680416281
[2026-03-26 19:48:42] 2026-03-26 18:47:41,576 | INFO     | current memory leak: 0.46 B/s (using 564 data points, chi2=0.09)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,577 | INFO     | could have reported an average CPU frequency of 2250 MHz (24 samples)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,577 | INFO     | ..............................
[2026-03-26 19:48:42] 2026-03-26 18:47:41,577 | INFO     | . Timing measurements:
[2026-03-26 19:48:42] 2026-03-26 18:47:41,577 | INFO     | . get job = 0 s
[2026-03-26 19:48:42] 2026-03-26 18:47:41,577 | INFO     | . initial setup = 101 s
[2026-03-26 19:48:42] 2026-03-26 18:47:41,577 | INFO     | . payload setup = 156 s
[2026-03-26 19:48:42] 2026-03-26 18:47:41,577 | INFO     | . stage-in = 0 s
[2026-03-26 19:48:42] 2026-03-26 18:47:41,577 | INFO     | . payload execution = 36668 s
[2026-03-26 19:48:42] 2026-03-26 18:47:41,577 | INFO     | . stage-out = 7 s
[2026-03-26 19:48:42] 2026-03-26 18:47:41,578 | INFO     | . log creation = 1 s
[2026-03-26 19:48:42] 2026-03-26 18:47:41,578 | INFO     | ..............................
[2026-03-26 19:48:42] 2026-03-26 18:47:41,693 | INFO     | 
[2026-03-26 19:48:42] 2026-03-26 18:47:41,693 | INFO     | job summary report
[2026-03-26 19:48:42] 2026-03-26 18:47:41,693 | INFO     | --------------------------------------------------
[2026-03-26 19:48:42] 2026-03-26 18:47:41,693 | INFO     | PanDA job id: 7057073644
[2026-03-26 19:48:42] 2026-03-26 18:47:41,693 | INFO     | task id: 49176275
[2026-03-26 19:48:42] 2026-03-26 18:47:41,693 | INFO     | errors: (none)
[2026-03-26 19:48:42] 2026-03-26 18:47:41,693 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 19:48:42] 2026-03-26 18:47:41,693 | INFO     | pilot state: finished 
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | transexitcode: 0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | exeerrorcode: 0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | exeerrordiag: 
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | exitcode: 0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | exitmsg: OK
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | cpuconsumptiontime: 144216 s
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | nevents: 400
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | neventsw: 0
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | pid: 4827
[2026-03-26 19:48:42] 2026-03-26 18:47:41,694 | INFO     | pgrp: 4827
[2026-03-26 19:48:42] 2026-03-26 18:47:41,695 | INFO     | corecount: 8
[2026-03-26 19:48:42] 2026-03-26 18:47:41,695 | INFO     | event service: False
[2026-03-26 19:48:42] 2026-03-26 18:47:41,695 | INFO     | sizes: {0: 2279208, 1: 2279893, 2: 2280354, 12: 2280354, 36829: 2320984, 36830: 2320983, 36838: 2330165, 36840: 2330221, 36842: 2330415}
[2026-03-26 19:48:42] 2026-03-26 18:47:41,695 | INFO     | --------------------------------------------------
[2026-03-26 19:48:42] 2026-03-26 18:47:41,695 | INFO     | 
[2026-03-26 19:48:42] 2026-03-26 18:47:41,695 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-26 19:48:42] 2026-03-26 18:47:42,240 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,240 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,240 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,240 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,242 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 19:48:42] 2026-03-26 18:47:42,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,242 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 19:48:42] 2026-03-26 18:47:42,242 | INFO     | job 7057073644 has completed (purged errors)
[2026-03-26 19:48:42] 2026-03-26 18:47:42,242 | INFO     | overall cleanup function is called
[2026-03-26 19:48:42] 2026-03-26 18:47:43,251 | INFO     | --- collectZombieJob: --- 10, [4827]
[2026-03-26 19:48:42] 2026-03-26 18:47:43,252 | INFO     | zombie collector waiting for pid 4827
[2026-03-26 19:48:42] 2026-03-26 18:47:43,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 19:48:42] 2026-03-26 18:47:43,252 | INFO     | collected zombie processes
[2026-03-26 19:48:42] 2026-03-26 18:47:43,252 | INFO     | will attempt to kill all subprocesses of pid=4827
[2026-03-26 19:48:42] 2026-03-26 18:47:43,378 | INFO     | process IDs to be killed: [4827] (in reverse order)
[2026-03-26 19:48:42] 2026-03-26 18:47:44,109 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 19:48:42] 2026-03-26 18:47:44,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 19:48:42] 2026-03-26 18:47:44,113 | INFO     | did not find any defunct processes belonging to 4827
[2026-03-26 19:48:42] 2026-03-26 18:47:44,116 | INFO     | did not find any defunct processes belonging to 4827
[2026-03-26 19:48:42] 2026-03-26 18:47:44,116 | INFO     | ready for new job
[2026-03-26 19:48:42] 2026-03-26 18:47:44,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 19:48:42] 2026-03-26 18:47:44,119 | INFO     | **************************************
[2026-03-26 19:48:42] 2026-03-26 18:47:44,119 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 19:48:42] 2026-03-26 18:47:44,119 | INFO     | **************************************
[2026-03-26 19:48:42] 2026-03-26 18:47:44,120 | INFO     | 
[2026-03-26 19:48:42] 2026-03-26 18:47:44,120 | INFO     | pilot is running in a VM
[2026-03-26 19:48:42] 2026-03-26 18:47:44,120 | INFO     | architecture information:
[2026-03-26 19:48:42] 2026-03-26 18:47:44,123 | INFO     | executing command: cat /etc/os-release
[2026-03-26 19:48:42] 2026-03-26 18:47:44,358 | INFO     | cat /etc/os-release:
[2026-03-26 19:48:42] NAME="CentOS Linux"
[2026-03-26 19:48:42] VERSION="7 (Core)"
[2026-03-26 19:48:42] ID="centos"
[2026-03-26 19:48:42] ID_LIKE="rhel fedora"
[2026-03-26 19:48:42] VERSION_ID="7"
[2026-03-26 19:48:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 19:48:42] ANSI_COLOR="0;31"
[2026-03-26 19:48:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 19:48:42] HOME_URL="https://www.centos.org/"
[2026-03-26 19:48:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 19:48:42] 
[2026-03-26 19:48:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 19:48:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 19:48:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 19:48:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 19:48:42] 
[2026-03-26 19:48:42] 2026-03-26 18:47:44,358 | INFO     | **************************************
[2026-03-26 19:48:42] 2026-03-26 18:47:44,862 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-26 19:48:42] 2026-03-26 18:47:45,126 | INFO     | sufficient remaining disk space (495882076160 B)
[2026-03-26 19:48:42] 2026-03-26 18:47:45,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 19:48:42] 2026-03-26 18:47:45,127 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 19:48:42] 2026-03-26 18:47:45,127 | INFO     | update_server=False
[2026-03-26 19:48:42] 2026-03-26 18:47:45,127 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 19:48:42] 2026-03-26 18:47:45,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 19:48:42] 2026-03-26 18:47:45,128 | INFO     | aborting loop
[2026-03-26 19:48:42] 2026-03-26 18:47:45,217 | INFO     | all job control threads have been joined
[2026-03-26 19:48:42] 2026-03-26 18:47:45,873 | INFO     | all payload control threads have been joined
[2026-03-26 19:48:42] 2026-03-26 18:47:46,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 19:48:42] 2026-03-26 18:47:46,108 | INFO     | all data control threads have been joined
[2026-03-26 19:48:42] 2026-03-26 18:47:46,133 | INFO     | [job] retrieve thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:46,134 | INFO     | [job] job monitor thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:46,187 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:46,223 | INFO     | [job] control thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:46,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 19:48:42] 2026-03-26 18:47:46,707 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:46,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 19:48:42] 2026-03-26 18:47:46,879 | INFO     | [payload] control thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:46,895 | INFO     | [data] copytool_in thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:46,957 | INFO     | [payload] validate_post thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:47,065 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:47,114 | INFO     | [data] control thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:47,221 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:47,417 | INFO     | [job] validate thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:47,584 | INFO     | [payload] failed_post thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:47,713 | INFO     | [job] queue monitor thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:48,023 | INFO     | [data] copytool_out thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:47:50,238 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 19:48:42] 2026-03-26 18:48:14,696 | INFO     | PID=32694 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-26 19:48:42] 2026-03-26 18:48:14,697 | INFO     | .. there are 9 such processes running
[2026-03-26 19:48:42] 2026-03-26 18:48:14,697 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 19:48:42] 2026-03-26 18:48:14,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 19:48:42] 2026-03-26 18:48:14,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 19:48:42] 2026-03-26 18:48:31,330 | INFO     | [monitor] cgroup control has ended
[2026-03-26 19:48:42] 2026-03-26 18:48:32,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313874274112)>', '<ExcThread(monitor, started 140313578411776)>']
[2026-03-26 19:48:42] 2026-03-26 18:48:32,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 19:48:42] 2026-03-26 18:48:32,807 | INFO     | [monitor] control thread has ended
[2026-03-26 19:48:42] 2026-03-26 18:48:37,733 | INFO     | all workflow threads have been joined
[2026-03-26 19:48:42] 2026-03-26 18:48:37,734 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 19:48:42] 2026-03-26 18:48:37,734 | INFO     | traces error code: 0
[2026-03-26 19:48:42] 2026-03-26 18:48:37,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 19:48:42] 2026-03-26 18:48:37,984 [wrapper] ==== pilot stdout END ====
[2026-03-26 19:48:42] 2026-03-26 18:48:38,053 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 19:48:42] 2026-03-26 18:48:38,093 [wrapper] pilotpid: 32694
[2026-03-26 19:48:42] 2026-03-26 18:48:38,128 [wrapper] Pilot exit status: 0
[2026-03-26 19:48:42] 2026-03-26 18:48:38,415 [wrapper] pandaids: 7057073644
[2026-03-26 19:48:42] 2026-03-26 18:48:38,911 [wrapper] cleanup supervisor_pilot 16712 32695
[2026-03-26 19:48:42] 2026-03-26 18:48:39,007 [wrapper] Test setup, not cleaning
[2026-03-26 19:48:42] 2026-03-26 18:48:39,102 [wrapper] apfmon messages muted
[2026-03-26 19:48:42] 2026-03-26 18:48:39,196 [wrapper] ==== wrapper stdout END ====
[2026-03-26 19:48:42] 2026-03-26 18:48:39,290 [wrapper] ==== wrapper stderr END ====
[2026-03-26 19:48:42]  *** Error codes and diagnostics ***
[2026-03-26 19:48:42]     "exeErrorCode": 0,
[2026-03-26 19:48:42]     "exeErrorDiag": "",
[2026-03-26 19:48:42]     "pilotErrorCode": 0,
[2026-03-26 19:48:42]     "pilotErrorDiag": "",
[2026-03-26 19:48:42]  *** Listing of results directory ***
[2026-03-26 19:48:42] total 494660
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc    585013 Mar 17 01:55 pilot3.tar.gz
[2026-03-26 19:48:42] -rwx------. 1 boinc boinc     36322 Mar 17 01:56 runpilot2-wrapper.sh
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc      5111 Mar 17 01:56 queuedata.json
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc       100 Mar 26 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 19:48:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar 26 09:28 run_atlas
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc       105 Mar 26 09:28 job.xml
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc      6391 Mar 26 09:28 init_data.xml
[2026-03-26 19:48:42] -rw-r--r--. 2 boinc boinc 245293573 Mar 26 09:28 EVNT.49133299._000010.pool.root.1
[2026-03-26 19:48:42] -rw-r--r--. 2 boinc boinc     15845 Mar 26 09:28 start_atlas.sh
[2026-03-26 19:48:42] drwxrwx--x. 2 boinc boinc        68 Mar 26 09:28 shared
[2026-03-26 19:48:42] -rw-r--r--. 2 boinc boinc    597542 Mar 26 09:28 input.tar.gz
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc         0 Mar 26 09:28 boinc_lockfile
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc      2611 Mar 26 09:28 pandaJob.out
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc       413 Mar 26 09:33 workernode_map.json
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc   1012192 Mar 26 09:33 agis_schedconf.cvmfs.json
[2026-03-26 19:48:42] drwx------. 5 boinc boinc      4096 Mar 26 09:33 pilot3
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc 245629181 Mar 26 19:46 HITS.49176275._000234.pool.root.1
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc       531 Mar 26 19:46 boinc_task_state.xml
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc      1018 Mar 26 19:47 memory_monitor_summary.json
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc        95 Mar 26 19:47 pilot_heartbeat.json
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc   1511579 Mar 26 19:47 agis_ddmendpoints.agis.ALL.json
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc    767149 Mar 26 19:47 log.49176275._000234.job.log.tgz.1
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc      6315 Mar 26 19:47 heartbeat.json
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc      8192 Mar 26 19:48 boinc_mmap_file
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc        29 Mar 26 19:48 wrapper_checkpoint.txt
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc      4880 Mar 26 19:48 pilotlog.txt
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc   5069952 Mar 26 19:48 log.49176275._000234.job.log.1
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc       357 Mar 26 19:48 output.list
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc       620 Mar 26 19:48 runtime_log
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc   5857280 Mar 26 19:48 result.tar.gz
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc      8816 Mar 26 19:48 runtime_log.err
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc       658 Mar 26 19:48 CPfMDmVuXM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrTzLDmfQmo0m.diag
[2026-03-26 19:48:42] -rw-r--r--. 1 boinc boinc     20742 Mar 26 19:48 stderr.txt
[2026-03-26 19:48:42] HITS file was successfully produced:
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc 245629181 Mar 26 19:46 shared/HITS.pool.root.1
[2026-03-26 19:48:42]  *** Contents of shared directory: ***
[2026-03-26 19:48:42] total 485744
[2026-03-26 19:48:42] -rw-r--r--. 2 boinc boinc 245293573 Mar 26 09:28 ATLAS.root_0
[2026-03-26 19:48:42] -rw-r--r--. 2 boinc boinc     15845 Mar 26 09:28 start_atlas.sh
[2026-03-26 19:48:42] -rw-r--r--. 2 boinc boinc    597542 Mar 26 09:28 input.tar.gz
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc 245629181 Mar 26 19:46 HITS.pool.root.1
[2026-03-26 19:48:42] -rw-------. 1 boinc boinc   5857280 Mar 26 19:48 result.tar.gz
19:48:43 (28569): run_atlas exited; CPU time 144767.522545
19:48:43 (28569): called boinc_finish(0)

</stderr_txt>
]]>

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