Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:00:03 (937): wrapper (7.7.26015): starting
07:00:03 (937): wrapper: running run_atlas (--nthreads 8)
[2026-03-26 07:00:03] Arguments: --nthreads 8
[2026-03-26 07:00:03] Threads: 8
[2026-03-26 07:00:03] Checking for CVMFS
[2026-03-26 07:00:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 07:00:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 07:00:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 07:00:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 07:00:07] 2.11.2.0 26786 144466 139712 157709 3 54 16408872 25165824 4640 130560 153 48365035 99.814 41138588 1194 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-26 07:00:07] CVMFS is ok
[2026-03-26 07:00:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 07:00:07] Checking for apptainer binary...
[2026-03-26 07:00:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 07:00:07] Running /usr/bin/apptainer --version
[2026-03-26 07:00:08] apptainer version 1.3.2-1.el7
[2026-03-26 07:00:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 07:00:15] cg-vwn410.simple-grid.lan
[2026-03-26 07:00:15] apptainer works
[2026-03-26 07:00:15] Set ATHENA_PROC_NUMBER=8
[2026-03-26 07:00:15] Set ATHENA_CORE_NUMBER=8
[2026-03-26 07:00:15] Starting ATLAS job with PandaID=7057001349
[2026-03-26 07:00:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 17:14:53]  *** The last 200 lines of the pilot log: ***
[2026-03-26 17:14:53] 2026-03-26 16:14:05,614 | INFO     | total number of processed events: 400 (read)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,616 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7057001349/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,617 | INFO     | extracted standard info from prmon json
[2026-03-26 17:14:53] 2026-03-26 16:14:05,617 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 17:14:53] 2026-03-26 16:14:05,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 17:14:53] 2026-03-26 16:14:05,618 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 17:14:53] 2026-03-26 16:14:05,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 17:14:53] 2026-03-26 16:14:05,629 | INFO     | fitting pss+swap vs Time
[2026-03-26 17:14:53] 2026-03-26 16:14:05,630 | INFO     | sum of square deviations: 64988502232.5
[2026-03-26 17:14:53] 2026-03-26 16:14:05,643 | INFO     | sum of deviations: 280152037014.5
[2026-03-26 17:14:53] 2026-03-26 16:14:05,643 | INFO     | mean x: 1774523538.5
[2026-03-26 17:14:53] 2026-03-26 16:14:05,643 | INFO     | mean y: 2489869.8063973063
[2026-03-26 17:14:53] 2026-03-26 16:14:05,643 | INFO     | intersect: -7647115321.315261
[2026-03-26 17:14:53] 2026-03-26 16:14:05,644 | INFO     | chi2: 7.470509494846784
[2026-03-26 17:14:53] 2026-03-26 16:14:05,645 | INFO     | sum of square deviations: 63361150790.0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,655 | INFO     | sum of deviations: 317522532193.0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,655 | INFO     | mean x: 1774523386.0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,655 | INFO     | mean y: 2493345.482173175
[2026-03-26 17:14:53] 2026-03-26 16:14:05,656 | INFO     | intersect: -8890198026.647123
[2026-03-26 17:14:53] 2026-03-26 16:14:05,656 | INFO     | chi2: 6.668712670905185
[2026-03-26 17:14:53] 2026-03-26 16:14:05,656 | INFO     | current chi2=6.668712670905185 (change=10.73282651597839 %)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,657 | INFO     | right removable region: 588
[2026-03-26 17:14:53] 2026-03-26 16:14:05,661 | INFO     | sum of square deviations: 63361150790.0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,671 | INFO     | sum of deviations: 62139230876.000015
[2026-03-26 17:14:53] 2026-03-26 16:14:05,671 | INFO     | mean x: 1774523691.0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,671 | INFO     | mean y: 2510296.1052631577
[2026-03-26 17:14:53] 2026-03-26 16:14:05,671 | INFO     | intersect: -1737791702.1246006
[2026-03-26 17:14:53] 2026-03-26 16:14:05,672 | INFO     | chi2: 2.556964134073377
[2026-03-26 17:14:53] 2026-03-26 16:14:05,672 | INFO     | current chi2=2.556964134073377 (change=65.77256028069851 %)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,673 | INFO     | sum of square deviations: 61761195210.0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,694 | INFO     | sum of deviations: -50438313843.999985
[2026-03-26 17:14:53] 2026-03-26 16:14:05,694 | INFO     | mean x: 1774523843.5
[2026-03-26 17:14:53] 2026-03-26 16:14:05,694 | INFO     | mean y: 2521003.0753424657
[2026-03-26 17:14:53] 2026-03-26 16:14:05,695 | INFO     | intersect: 1451715602.3343632
[2026-03-26 17:14:53] 2026-03-26 16:14:05,695 | INFO     | chi2: 1.0168407174586902
[2026-03-26 17:14:53] 2026-03-26 16:14:05,695 | INFO     | current chi2=1.0168407174586902 (change=60.23249978720625 %)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,696 | INFO     | sum of square deviations: 60188402930.0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,706 | INFO     | sum of deviations: -70354155165.99998
[2026-03-26 17:14:53] 2026-03-26 16:14:05,713 | INFO     | mean x: 1774523996.0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,713 | INFO     | mean y: 2522933.1312607946
[2026-03-26 17:14:53] 2026-03-26 16:14:05,714 | INFO     | intersect: 2076761997.1843655
[2026-03-26 17:14:53] 2026-03-26 16:14:05,714 | INFO     | chi2: 0.9723617974126424
[2026-03-26 17:14:53] 2026-03-26 16:14:05,715 | INFO     | current chi2=0.9723617974126424 (change=4.374226885525441 %)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,715 | INFO     | left removable region: 30
[2026-03-26 17:14:53] 2026-03-26 16:14:05,716 | INFO     | sum of square deviations: 53874050119.5
[2026-03-26 17:14:53] 2026-03-26 16:14:05,724 | INFO     | sum of deviations: -23164048072.999992
[2026-03-26 17:14:53] 2026-03-26 16:14:05,725 | INFO     | mean x: 1774524270.5
[2026-03-26 17:14:53] 2026-03-26 16:14:05,725 | INFO     | mean y: 2525896.6559139783
[2026-03-26 17:14:53] 2026-03-26 16:14:05,725 | INFO     | intersect: 765512258.6871771
[2026-03-26 17:14:53] 2026-03-26 16:14:05,726 | INFO     | chi2: 0.09788050264226125
[2026-03-26 17:14:53] 2026-03-26 16:14:05,726 | INFO     | current memory leak: -0.43 B/s (using 558 data points, chi2=0.10)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,727 | INFO     | could have reported an average CPU frequency of 1999 MHz (24 samples)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,727 | INFO     | ..............................
[2026-03-26 17:14:53] 2026-03-26 16:14:05,728 | INFO     | . Timing measurements:
[2026-03-26 17:14:53] 2026-03-26 16:14:05,728 | INFO     | . get job = 0 s
[2026-03-26 17:14:53] 2026-03-26 16:14:05,728 | INFO     | . initial setup = 110 s
[2026-03-26 17:14:53] 2026-03-26 16:14:05,728 | INFO     | . payload setup = 173 s
[2026-03-26 17:14:53] 2026-03-26 16:14:05,728 | INFO     | . stage-in = 0 s
[2026-03-26 17:14:53] 2026-03-26 16:14:05,728 | INFO     | . payload execution = 36310 s
[2026-03-26 17:14:53] 2026-03-26 16:14:05,728 | INFO     | . stage-out = 2 s
[2026-03-26 17:14:53] 2026-03-26 16:14:05,728 | INFO     | . log creation = 0 s
[2026-03-26 17:14:53] 2026-03-26 16:14:05,728 | INFO     | ..............................
[2026-03-26 17:14:53] 2026-03-26 16:14:05,861 | INFO     | time since job start (36507s) is within the limit (345600.0s)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,879 | INFO     | 
[2026-03-26 17:14:53] 2026-03-26 16:14:05,879 | INFO     | job summary report
[2026-03-26 17:14:53] 2026-03-26 16:14:05,879 | INFO     | --------------------------------------------------
[2026-03-26 17:14:53] 2026-03-26 16:14:05,879 | INFO     | PanDA job id: 7057001349
[2026-03-26 17:14:53] 2026-03-26 16:14:05,879 | INFO     | task id: 49176688
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | errors: (none)
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | pilot state: finished 
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | transexitcode: 0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | exeerrorcode: 0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | exeerrordiag: 
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | exitcode: 0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | exitmsg: OK
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | cpuconsumptiontime: 141504 s
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | nevents: 400
[2026-03-26 17:14:53] 2026-03-26 16:14:05,880 | INFO     | neventsw: 0
[2026-03-26 17:14:53] 2026-03-26 16:14:05,881 | INFO     | pid: 9664
[2026-03-26 17:14:53] 2026-03-26 16:14:05,881 | INFO     | pgrp: 9664
[2026-03-26 17:14:53] 2026-03-26 16:14:05,881 | INFO     | corecount: 8
[2026-03-26 17:14:53] 2026-03-26 16:14:05,881 | INFO     | event service: False
[2026-03-26 17:14:53] 2026-03-26 16:14:05,881 | INFO     | sizes: {0: 2279221, 1: 2279906, 2: 2280367, 13: 2280367, 36488: 2320893, 36491: 2329891, 36492: 2330075, 36494: 2330269}
[2026-03-26 17:14:53] 2026-03-26 16:14:05,881 | INFO     | --------------------------------------------------
[2026-03-26 17:14:53] 2026-03-26 16:14:05,881 | INFO     | 
[2026-03-26 17:14:53] 2026-03-26 16:14:05,881 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-26 17:14:53] 2026-03-26 16:14:06,293 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,293 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,293 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,293 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,295 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 17:14:53] 2026-03-26 16:14:06,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,295 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 17:14:53] 2026-03-26 16:14:06,295 | INFO     | job 7057001349 has completed (purged errors)
[2026-03-26 17:14:53] 2026-03-26 16:14:06,296 | INFO     | overall cleanup function is called
[2026-03-26 17:14:53] 2026-03-26 16:14:07,304 | INFO     | --- collectZombieJob: --- 10, [9664]
[2026-03-26 17:14:53] 2026-03-26 16:14:07,304 | INFO     | zombie collector waiting for pid 9664
[2026-03-26 17:14:53] 2026-03-26 16:14:07,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 17:14:53] 2026-03-26 16:14:07,304 | INFO     | collected zombie processes
[2026-03-26 17:14:53] 2026-03-26 16:14:07,305 | INFO     | will attempt to kill all subprocesses of pid=9664
[2026-03-26 17:14:53] 2026-03-26 16:14:07,419 | INFO     | process IDs to be killed: [9664] (in reverse order)
[2026-03-26 17:14:53] 2026-03-26 16:14:08,376 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 17:14:53] 2026-03-26 16:14:08,376 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 17:14:53] 2026-03-26 16:14:08,379 | INFO     | did not find any defunct processes belonging to 9664
[2026-03-26 17:14:53] 2026-03-26 16:14:08,383 | INFO     | did not find any defunct processes belonging to 9664
[2026-03-26 17:14:53] 2026-03-26 16:14:08,383 | INFO     | ready for new job
[2026-03-26 17:14:53] 2026-03-26 16:14:08,383 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 17:14:53] 2026-03-26 16:14:08,386 | INFO     | **************************************
[2026-03-26 17:14:53] 2026-03-26 16:14:08,386 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 17:14:53] 2026-03-26 16:14:08,386 | INFO     | **************************************
[2026-03-26 17:14:53] 2026-03-26 16:14:08,387 | INFO     | 
[2026-03-26 17:14:53] 2026-03-26 16:14:08,387 | INFO     | pilot is running in a VM
[2026-03-26 17:14:53] 2026-03-26 16:14:08,387 | INFO     | architecture information:
[2026-03-26 17:14:53] 2026-03-26 16:14:08,388 | INFO     | executing command: cat /etc/os-release
[2026-03-26 17:14:53] 2026-03-26 16:14:08,714 | INFO     | cat /etc/os-release:
[2026-03-26 17:14:53] NAME="CentOS Linux"
[2026-03-26 17:14:53] VERSION="7 (Core)"
[2026-03-26 17:14:53] ID="centos"
[2026-03-26 17:14:53] ID_LIKE="rhel fedora"
[2026-03-26 17:14:53] VERSION_ID="7"
[2026-03-26 17:14:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 17:14:53] ANSI_COLOR="0;31"
[2026-03-26 17:14:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 17:14:53] HOME_URL="https://www.centos.org/"
[2026-03-26 17:14:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 17:14:53] 
[2026-03-26 17:14:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 17:14:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 17:14:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 17:14:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 17:14:53] 
[2026-03-26 17:14:53] 2026-03-26 16:14:08,715 | INFO     | **************************************
[2026-03-26 17:14:53] 2026-03-26 16:14:09,218 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-26 17:14:53] 2026-03-26 16:14:09,498 | INFO     | sufficient remaining disk space (495627272192 B)
[2026-03-26 17:14:53] 2026-03-26 16:14:09,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 17:14:53] 2026-03-26 16:14:09,499 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 17:14:53] 2026-03-26 16:14:09,499 | INFO     | update_server=False
[2026-03-26 17:14:53] 2026-03-26 16:14:09,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 17:14:53] 2026-03-26 16:14:09,619 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 17:14:53] 2026-03-26 16:14:09,847 | INFO     | all payload control threads have been joined
[2026-03-26 17:14:53] 2026-03-26 16:14:10,288 | INFO     | all data control threads have been joined
[2026-03-26 17:14:53] 2026-03-26 16:14:10,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 17:14:53] 2026-03-26 16:14:10,446 | INFO     | all job control threads have been joined
[2026-03-26 17:14:53] 2026-03-26 16:14:10,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 17:14:53] 2026-03-26 16:14:10,481 | INFO     | aborting loop
[2026-03-26 17:14:53] 2026-03-26 16:14:10,505 | INFO     | [job] retrieve thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:10,763 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:10,786 | INFO     | [job] validate thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:10,853 | INFO     | [payload] control thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:10,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 17:14:53] 2026-03-26 16:14:10,925 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:10,990 | INFO     | [data] copytool_in thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:11,297 | INFO     | [data] control thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:11,452 | INFO     | [job] control thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:11,487 | INFO     | [job] job monitor thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:11,699 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:11,753 | INFO     | [payload] validate_post thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:11,899 | INFO     | [job] queue monitor thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:12,110 | INFO     | [payload] failed_post thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:12,300 | INFO     | [data] copytool_out thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:13,630 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:20,021 | INFO     | job.realtimelogging is not enabled
[2026-03-26 17:14:53] 2026-03-26 16:14:21,028 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 17:14:53] 2026-03-26 16:14:39,079 | INFO     | PID=5123 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-26 17:14:53] 2026-03-26 16:14:39,080 | INFO     | .. there are 9 such processes running
[2026-03-26 17:14:53] 2026-03-26 16:14:39,080 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 17:14:53] 2026-03-26 16:14:39,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 17:14:53] 2026-03-26 16:14:39,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 17:14:53] 2026-03-26 16:14:41,309 | INFO     | [monitor] cgroup control has ended
[2026-03-26 17:14:53] 2026-03-26 16:14:43,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590726883136)>', '<ExcThread(monitor, started 140590293436160)>']
[2026-03-26 17:14:53] 2026-03-26 16:14:44,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 17:14:53] 2026-03-26 16:14:44,111 | INFO     | [monitor] control thread has ended
[2026-03-26 17:14:53] 2026-03-26 16:14:48,435 | INFO     | all workflow threads have been joined
[2026-03-26 17:14:53] 2026-03-26 16:14:48,435 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 17:14:53] 2026-03-26 16:14:48,436 | INFO     | traces error code: 0
[2026-03-26 17:14:53] 2026-03-26 16:14:48,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 17:14:53] 2026-03-26 16:14:48,597 [wrapper] ==== pilot stdout END ====
[2026-03-26 17:14:53] 2026-03-26 16:14:48,600 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 17:14:53] 2026-03-26 16:14:48,611 [wrapper] pilotpid: 5123
[2026-03-26 17:14:53] 2026-03-26 16:14:48,717 [wrapper] Pilot exit status: 0
[2026-03-26 17:14:53] 2026-03-26 16:14:49,145 [wrapper] pandaids: 7057001349
[2026-03-26 17:14:53] 2026-03-26 16:14:50,098 [wrapper] cleanup supervisor_pilot  5653 5124
[2026-03-26 17:14:53] 2026-03-26 16:14:50,187 [wrapper] Test setup, not cleaning
[2026-03-26 17:14:53] 2026-03-26 16:14:50,275 [wrapper] apfmon messages muted
[2026-03-26 17:14:53] 2026-03-26 16:14:50,316 [wrapper] ==== wrapper stdout END ====
[2026-03-26 17:14:53] 2026-03-26 16:14:50,398 [wrapper] ==== wrapper stderr END ====
[2026-03-26 17:14:53]  *** Error codes and diagnostics ***
[2026-03-26 17:14:53]     "exeErrorCode": 0,
[2026-03-26 17:14:53]     "exeErrorDiag": "",
[2026-03-26 17:14:53]     "pilotErrorCode": 0,
[2026-03-26 17:14:53]     "pilotErrorDiag": "",
[2026-03-26 17:14:53]  *** Listing of results directory ***
[2026-03-26 17:14:53] total 478300
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc    585013 Mar 17 01:35 pilot3.tar.gz
[2026-03-26 17:14:53] -rwx------. 1 boinc boinc     36322 Mar 17 01:37 runpilot2-wrapper.sh
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc      5111 Mar 17 01:40 queuedata.json
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc       100 Mar 26 07:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 17:14:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar 26 07:00 run_atlas
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc       105 Mar 26 07:00 job.xml
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc      6391 Mar 26 07:00 init_data.xml
[2026-03-26 17:14:53] -rw-r--r--. 2 boinc boinc 241616386 Mar 26 07:00 EVNT.49134869._000008.pool.root.1
[2026-03-26 17:14:53] -rw-r--r--. 2 boinc boinc     15845 Mar 26 07:00 start_atlas.sh
[2026-03-26 17:14:53] drwxrwx--x. 2 boinc boinc        68 Mar 26 07:00 shared
[2026-03-26 17:14:53] -rw-r--r--. 2 boinc boinc    597537 Mar 26 07:00 input.tar.gz
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc         0 Mar 26 07:00 boinc_lockfile
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc      2622 Mar 26 07:00 pandaJob.out
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc       415 Mar 26 07:05 workernode_map.json
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc   1012182 Mar 26 07:05 agis_schedconf.cvmfs.json
[2026-03-26 17:14:53] drwx------. 5 boinc boinc      4096 Mar 26 07:05 pilot3
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc 232612802 Mar 26 17:12 HITS.49176688._000200.pool.root.1
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc       532 Mar 26 17:12 boinc_task_state.xml
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc        95 Mar 26 17:13 pilot_heartbeat.json
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc      1018 Mar 26 17:13 memory_monitor_summary.json
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc   1511579 Mar 26 17:14 agis_ddmendpoints.agis.ALL.json
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc    782376 Mar 26 17:14 log.49176688._000200.job.log.tgz.1
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc      6314 Mar 26 17:14 heartbeat.json
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc        29 Mar 26 17:14 wrapper_checkpoint.txt
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc      8192 Mar 26 17:14 boinc_mmap_file
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc      4951 Mar 26 17:14 pilotlog.txt
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc   5022264 Mar 26 17:14 log.49176688._000200.job.log.1
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc       357 Mar 26 17:14 output.list
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc       620 Mar 26 17:14 runtime_log
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc   5826560 Mar 26 17:14 result.tar.gz
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc      8816 Mar 26 17:14 runtime_log.err
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc       658 Mar 26 17:14 BABODmvbXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1LwLDmLPigQo.diag
[2026-03-26 17:14:53] -rw-r--r--. 1 boinc boinc     20708 Mar 26 17:14 stderr.txt
[2026-03-26 17:14:53] HITS file was successfully produced:
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc 232612802 Mar 26 17:12 shared/HITS.pool.root.1
[2026-03-26 17:14:53]  *** Contents of shared directory: ***
[2026-03-26 17:14:53] total 469412
[2026-03-26 17:14:53] -rw-r--r--. 2 boinc boinc 241616386 Mar 26 07:00 ATLAS.root_0
[2026-03-26 17:14:53] -rw-r--r--. 2 boinc boinc     15845 Mar 26 07:00 start_atlas.sh
[2026-03-26 17:14:53] -rw-r--r--. 2 boinc boinc    597537 Mar 26 07:00 input.tar.gz
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc 232612802 Mar 26 17:12 HITS.pool.root.1
[2026-03-26 17:14:53] -rw-------. 1 boinc boinc   5826560 Mar 26 17:14 result.tar.gz
17:14:54 (937): run_atlas exited; CPU time 142082.086781
17:14:54 (937): called boinc_finish(0)

</stderr_txt>
]]>

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