Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:48:41 (11232): wrapper (7.7.26015): starting
09:48:41 (11232): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 09:48:41] Arguments: --nthreads 8
[2026-03-25 09:48:41] Threads: 8
[2026-03-25 09:48:41] Checking for CVMFS
[2026-03-25 09:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 09:48:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 09:48:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 09:48:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 09:48:41] 2.11.0.0 5771 29988 67420 157676 3 188 2131672 4096001 4555 130560 0 4576528 99.834 1617534 268 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 09:48:41] CVMFS is ok
[2026-03-25 09:48:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 09:48:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 09:48:41] Further information can be found at the LHC@home message board.
[2026-03-25 09:48:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 09:48:41] Checking for apptainer binary...
[2026-03-25 09:48:41] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 09:48:41] apptainer is not installed, using version from CVMFS
[2026-03-25 09:48:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 09:48:41] WARNING: Environment variable TMPDIR already has value [/tmp/job_11392818/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node201
[2026-03-25 09:48:41] apptainer works
[2026-03-25 09:48:41] Set ATHENA_PROC_NUMBER=8
[2026-03-25 09:48:41] Set ATHENA_CORE_NUMBER=8
[2026-03-25 09:48:41] Starting ATLAS job with PandaID=7057011356
[2026-03-25 09:48:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11392818/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 11:33:06]  *** The last 200 lines of the pilot log: ***
[2026-03-25 11:33:06] 2026-03-25 10:32:34,516 | INFO     | this job has now completed (state=finished)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,516 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,516 | INFO     | log transfer has been attempted: DONE
[2026-03-25 11:33:06] 2026-03-25 10:32:34,516 | INFO     | job 7057011356 has finished - writing final server update
[2026-03-25 11:33:06] 2026-03-25 10:32:34,516 | INFO     | total number of processed events: 400 (read)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,548 | INFO     | using path: /tmp/job_11392818/atlas/pilot/slots/0/PanDA_Pilot-7057011356/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,549 | INFO     | extracted standard info from prmon json
[2026-03-25 11:33:06] 2026-03-25 10:32:34,549 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 11:33:06] 2026-03-25 10:32:34,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 11:33:06] 2026-03-25 10:32:34,549 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 11:33:06] 2026-03-25 10:32:34,549 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 11:33:06] 2026-03-25 10:32:34,550 | INFO     | fitting pss+swap vs Time
[2026-03-25 11:33:06] 2026-03-25 10:32:34,550 | INFO     | sum of square deviations: 329031285.5
[2026-03-25 11:33:06] 2026-03-25 10:32:34,550 | INFO     | sum of deviations: 10973830826.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,550 | INFO     | mean x: 1774431626.5
[2026-03-25 11:33:06] 2026-03-25 10:32:34,550 | INFO     | mean y: 2494640.0392156863
[2026-03-25 11:33:06] 2026-03-25 10:32:34,550 | INFO     | intersect: -59178237830.20187
[2026-03-25 11:33:06] 2026-03-25 10:32:34,550 | INFO     | chi2: 1.1466141087602009
[2026-03-25 11:33:06] 2026-03-25 10:32:34,551 | INFO     | sum of square deviations: 282974608.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,551 | INFO     | sum of deviations: 10346452841.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,551 | INFO     | mean x: 1774431474.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,551 | INFO     | mean y: 2492561.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,551 | INFO     | intersect: -64876373055.54718
[2026-03-25 11:33:06] 2026-03-25 10:32:34,551 | INFO     | chi2: 1.1486715293546566
[2026-03-25 11:33:06] 2026-03-25 10:32:34,551 | INFO     | current chi2=1.1486715293546566 (change=-0.1794344390790996 %)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,551 | INFO     | right removable region: 96
[2026-03-25 11:33:06] 2026-03-25 10:32:34,551 | INFO     | sum of square deviations: 282974608.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | sum of deviations: -1064224726.9999999
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | mean x: 1774431779.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | mean y: 2533467.412371134
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | intersect: 6675903169.850121
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | chi2: 0.0036390110890772713
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | current chi2=0.0036390110890772713 (change=99.68262983498327 %)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | sum of square deviations: 241429643.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | sum of deviations: -1139081761.5000002
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | mean x: 1774431931.5
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | mean y: 2533718.032608696
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | intersect: 8374426353.415696
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | chi2: 0.0032118405211269308
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | current chi2=0.0032118405211269308 (change=11.738644304561776 %)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,552 | INFO     | left removable region: 20
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | sum of square deviations: 136095575.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | sum of deviations: -387998735.0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | mean x: 1774432053.5
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | mean y: 2529724.6315789474
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | intersect: 5061308396.175106
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | chi2: 0.002305408191463946
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | current memory leak: -2.85 B/s (using 76 data points, chi2=0.00)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | could have reported an average CPU frequency of 2677 MHz (7 samples)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | ..............................
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | . Timing measurements:
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | . get job = 0 s
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | . initial setup = 2 s
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | . payload setup = 3 s
[2026-03-25 11:33:06] 2026-03-25 10:32:34,553 | INFO     | . stage-in = 0 s
[2026-03-25 11:33:06] 2026-03-25 10:32:34,554 | INFO     | . payload execution = 6204 s
[2026-03-25 11:33:06] 2026-03-25 10:32:34,554 | INFO     | . stage-out = 0 s
[2026-03-25 11:33:06] 2026-03-25 10:32:34,554 | INFO     | . log creation = 0 s
[2026-03-25 11:33:06] 2026-03-25 10:32:34,554 | INFO     | ..............................
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | 
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | job summary report
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | --------------------------------------------------
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | PanDA job id: 7057011356
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | task id: 49180565
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | errors: (none)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | pilot state: finished 
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | transexitcode: 0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | exeerrorcode: 0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | exeerrordiag: 
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | exitcode: 0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | exitmsg: OK
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | cpuconsumptiontime: 46122 s
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | nevents: 400
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | neventsw: 0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,600 | INFO     | pid: 30023
[2026-03-25 11:33:06] 2026-03-25 10:32:34,601 | INFO     | pgrp: 30023
[2026-03-25 11:33:06] 2026-03-25 10:32:34,601 | INFO     | corecount: 8
[2026-03-25 11:33:06] 2026-03-25 10:32:34,601 | INFO     | event service: False
[2026-03-25 11:33:06] 2026-03-25 10:32:34,601 | INFO     | sizes: {0: 2280440, 11: 2280440, 6211: 2307428, 6212: 2316511, 6215: 2316649}
[2026-03-25 11:33:06] 2026-03-25 10:32:34,601 | INFO     | --------------------------------------------------
[2026-03-25 11:33:06] 2026-03-25 10:32:34,601 | INFO     | 
[2026-03-25 11:33:06] 2026-03-25 10:32:34,601 | INFO     | executing command: ls -lF /tmp/job_11392818/atlas/pilot/slots/0
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,612 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,612 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,612 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 11:33:06] 2026-03-25 10:32:34,612 | INFO     | job 7057011356 has completed (purged errors)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,612 | INFO     | overall cleanup function is called
[2026-03-25 11:33:06] 2026-03-25 10:32:34,636 | WARNING  | process 30023 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 11:33:06] 2026-03-25 10:32:34,723 | INFO     | using path: /tmp/job_11392818/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 11:33:06] 2026-03-25 10:32:34,828 | INFO     | number of running child processes to parent process 30023: 1
[2026-03-25 11:33:06] 2026-03-25 10:32:34,828 | INFO     | maximum number of monitored processes: 6
[2026-03-25 11:33:06] 2026-03-25 10:32:34,828 | INFO     | aborting job monitoring since job object (job id=7057011356) has expired
[2026-03-25 11:33:06] 2026-03-25 10:32:35,618 | INFO     | --- collectZombieJob: --- 10, [30023]
[2026-03-25 11:33:06] 2026-03-25 10:32:35,618 | INFO     | zombie collector waiting for pid 30023
[2026-03-25 11:33:06] 2026-03-25 10:32:35,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 11:33:06] 2026-03-25 10:32:35,618 | INFO     | collected zombie processes
[2026-03-25 11:33:06] 2026-03-25 10:32:35,618 | INFO     | will attempt to kill all subprocesses of pid=30023
[2026-03-25 11:33:06] 2026-03-25 10:32:35,726 | INFO     | process IDs to be killed: [30023] (in reverse order)
[2026-03-25 11:33:06] 2026-03-25 10:32:35,765 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 11:33:06] 2026-03-25 10:32:35,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 11:33:06] 2026-03-25 10:32:35,769 | INFO     | did not find any defunct processes belonging to 30023
[2026-03-25 11:33:06] 2026-03-25 10:32:35,772 | INFO     | did not find any defunct processes belonging to 30023
[2026-03-25 11:33:06] 2026-03-25 10:32:35,772 | INFO     | ready for new job
[2026-03-25 11:33:06] 2026-03-25 10:32:35,772 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 11:33:06] 2026-03-25 10:32:35,773 | INFO     | **************************************
[2026-03-25 11:33:06] 2026-03-25 10:32:35,773 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 11:33:06] 2026-03-25 10:32:35,773 | INFO     | **************************************
[2026-03-25 11:33:06] 2026-03-25 10:32:35,773 | INFO     | 
[2026-03-25 11:33:06] 2026-03-25 10:32:35,788 | INFO     | architecture information:
[2026-03-25 11:33:06] 2026-03-25 10:32:35,788 | INFO     | executing command: cat /etc/os-release
[2026-03-25 11:33:06] 2026-03-25 10:32:35,794 | INFO     | cat /etc/os-release:
[2026-03-25 11:33:06] NAME="CentOS Linux"
[2026-03-25 11:33:06] VERSION="7 (Core)"
[2026-03-25 11:33:06] ID="centos"
[2026-03-25 11:33:06] ID_LIKE="rhel fedora"
[2026-03-25 11:33:06] VERSION_ID="7"
[2026-03-25 11:33:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 11:33:06] ANSI_COLOR="0;31"
[2026-03-25 11:33:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 11:33:06] HOME_URL="https://www.centos.org/"
[2026-03-25 11:33:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 11:33:06] 
[2026-03-25 11:33:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 11:33:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 11:33:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 11:33:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 11:33:06] 
[2026-03-25 11:33:06] 2026-03-25 10:32:35,795 | INFO     | **************************************
[2026-03-25 11:33:06] 2026-03-25 10:32:36,297 | INFO     | executing command: df -mP /tmp/job_11392818/atlas/pilot/slots/0
[2026-03-25 11:33:06] 2026-03-25 10:32:36,304 | INFO     | sufficient remaining disk space (225113538560 B)
[2026-03-25 11:33:06] 2026-03-25 10:32:36,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 11:33:06] 2026-03-25 10:32:36,304 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 11:33:06] 2026-03-25 10:32:36,304 | INFO     | update_server=False
[2026-03-25 11:33:06] 2026-03-25 10:32:36,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 11:33:06] 2026-03-25 10:32:36,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:33:06] 2026-03-25 10:32:36,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:33:06] 2026-03-25 10:32:36,305 | INFO     | aborting loop
[2026-03-25 11:33:06] 2026-03-25 10:32:37,213 | INFO     | all payload control threads have been joined
[2026-03-25 11:33:06] 2026-03-25 10:32:37,309 | INFO     | [job] retrieve thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:37,310 | INFO     | [job] queue monitor thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:37,310 | INFO     | [job] job monitor thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:37,313 | INFO     | all data control threads have been joined
[2026-03-25 11:33:06] 2026-03-25 10:32:37,473 | INFO     | [payload] validate_post thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:37,609 | INFO     | [payload] failed_post thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:37,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 11:33:06] 2026-03-25 10:32:37,849 | INFO     | all job control threads have been joined
[2026-03-25 11:33:06] 2026-03-25 10:32:37,889 | INFO     | [job] validate thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:38,067 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:38,154 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 11:33:06] 2026-03-25 10:32:38,218 | INFO     | [payload] control thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:38,317 | INFO     | [data] control thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:38,351 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:38,474 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:38,500 | INFO     | [data] copytool_in thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:38,854 | INFO     | [job] control thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:39,615 | INFO     | [data] copytool_out thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:42,159 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:47,342 | INFO     | job.realtimelogging is not enabled
[2026-03-25 11:33:06] 2026-03-25 10:32:48,347 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 11:33:06] 2026-03-25 10:32:58,553 | INFO     | [monitor] cgroup control has ended
[2026-03-25 11:33:06] 2026-03-25 10:33:00,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058988288)>']
[2026-03-25 11:33:06] 2026-03-25 10:33:05,402 | INFO     | all workflow threads have been joined
[2026-03-25 11:33:06] 2026-03-25 10:33:05,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 11:33:06] 2026-03-25 10:33:05,402 | INFO     | traces error code: 0
[2026-03-25 11:33:06] 2026-03-25 10:33:05,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 11:33:06] 2026-03-25 10:33:06,790 | INFO     | PID=15985 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 11:33:06] 2026-03-25 10:33:06,790 | INFO     | .. there are 6 such processes running
[2026-03-25 11:33:06] 2026-03-25 10:33:06,790 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 11:33:06] 2026-03-25 10:33:06,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 11:33:06] 2026-03-25 10:33:06,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 11:33:06] 2026-03-25 10:33:06,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 11:33:06] 2026-03-25 10:33:06,790 | INFO     | [monitor] control thread has ended
[2026-03-25 11:33:06] 2026-03-25 10:33:06,841 [wrapper] ==== pilot stdout END ====
[2026-03-25 11:33:06] 2026-03-25 10:33:06,842 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 11:33:06] 2026-03-25 10:33:06,843 [wrapper] pilotpid: 15985
[2026-03-25 11:33:06] 2026-03-25 10:33:06,844 [wrapper] Pilot exit status: 0
[2026-03-25 11:33:06] 2026-03-25 10:33:06,848 [wrapper] pandaids: 7057011356
[2026-03-25 11:33:06] 2026-03-25 10:33:06,873 [wrapper] cleanup supervisor_pilot  9678 15986
[2026-03-25 11:33:06] 2026-03-25 10:33:06,874 [wrapper] Test setup, not cleaning
[2026-03-25 11:33:06] 2026-03-25 10:33:06,875 [wrapper] apfmon messages muted
[2026-03-25 11:33:06] 2026-03-25 10:33:06,877 [wrapper] ==== wrapper stdout END ====
[2026-03-25 11:33:06] 2026-03-25 10:33:06,878 [wrapper] ==== wrapper stderr END ====
[2026-03-25 11:33:06]  *** Error codes and diagnostics ***
[2026-03-25 11:33:06]     "exeErrorCode": 0,
[2026-03-25 11:33:06]     "exeErrorDiag": "",
[2026-03-25 11:33:06]     "pilotErrorCode": 0,
[2026-03-25 11:33:06]     "pilotErrorDiag": "",
[2026-03-25 11:33:06]  *** Listing of results directory ***
[2026-03-25 11:33:07] total 466208
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user    585013 Mar 17 01:33 pilot3.tar.gz
[2026-03-25 11:33:07] -rwx------ 1 mf493845 unix-user     36322 Mar 17 01:34 runpilot2-wrapper.sh
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user      5111 Mar 17 01:35 queuedata.json
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user       100 Mar 25 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 11:33:07] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 08:46 run_atlas
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user       105 Mar 25 08:46 job.xml
[2026-03-25 11:33:07] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:48 start_atlas.sh
[2026-03-25 11:33:07] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 09:48 shared
[2026-03-25 11:33:07] -rw-r--r-- 2 mf493845 unix-user    597541 Mar 25 09:48 input.tar.gz
[2026-03-25 11:33:07] -rw-r--r-- 2 mf493845 unix-user 244087616 Mar 25 09:48 EVNT.49133453._000001.pool.root.1
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user         0 Mar 25 09:48 boinc_setup_complete
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user      6391 Mar 25 09:48 init_data.xml
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user      8192 Mar 25 09:48 boinc_mmap_file
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user         0 Mar 25 09:48 boinc_lockfile
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user      2630 Mar 25 09:48 pandaJob.out
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user   1010820 Mar 25 09:48 agis_schedconf.cvmfs.json
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user   1511579 Mar 25 09:48 agis_ddmendpoints.agis.ALL.json
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user       413 Mar 25 09:48 workernode_map.json
[2026-03-25 11:33:07] drwx------ 5 mf493845 unix-user       440 Mar 25 09:48 pilot3
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user 226871907 Mar 25 11:32 HITS.49180565._000009.pool.root.1
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user        95 Mar 25 11:32 pilot_heartbeat.json
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user      1012 Mar 25 11:32 memory_monitor_summary.json
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user    342507 Mar 25 11:32 log.49180565._000009.job.log.tgz.1
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user      6285 Mar 25 11:32 heartbeat.json
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user       820 Mar 25 11:33 pilotlog.txt
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user    923729 Mar 25 11:33 log.49180565._000009.job.log.1
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user       357 Mar 25 11:33 output.list
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user       620 Mar 25 11:33 runtime_log
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user   1280000 Mar 25 11:33 result.tar.gz
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user       644 Mar 25 11:33 TqeKDmIZXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmMFwLDmvdLVYn.diag
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user      9219 Mar 25 11:33 runtime_log.err
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user     21673 Mar 25 11:33 stderr.txt
[2026-03-25 11:33:07] HITS file was successfully produced:
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user 226871907 Mar 25 11:32 shared/HITS.pool.root.1
[2026-03-25 11:33:07]  *** Contents of shared directory: ***
[2026-03-25 11:33:07] total 461776
[2026-03-25 11:33:07] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:48 start_atlas.sh
[2026-03-25 11:33:07] -rw-r--r-- 2 mf493845 unix-user    597541 Mar 25 09:48 input.tar.gz
[2026-03-25 11:33:07] -rw-r--r-- 2 mf493845 unix-user 244087616 Mar 25 09:48 ATLAS.root_0
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user 226871907 Mar 25 11:32 HITS.pool.root.1
[2026-03-25 11:33:07] -rw------- 1 mf493845 unix-user   1280000 Mar 25 11:33 result.tar.gz
11:33:08 (11232): run_atlas exited; CPU time 46221.990672
11:33:08 (11232): called boinc_finish(0)

</stderr_txt>
]]>

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