Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:00:36 (31459): wrapper (7.7.26015): starting
10:00:36 (31459): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 10:00:36] Arguments: --nthreads 8
[2026-03-25 10:00:36] Threads: 8
[2026-03-25 10:00:36] Checking for CVMFS
[2026-03-25 10:00:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 10:00:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 10:00:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 10:00:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 10:00:36] 2.11.0.0 5805 30149 83364 157676 3 188 3919135 4096001 6366 130560 13 7357887 99.792 2267021 172 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 10:00:36] CVMFS is ok
[2026-03-25 10:00:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 10:00:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 10:00:36] Further information can be found at the LHC@home message board.
[2026-03-25 10:00:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 10:00:36] Checking for apptainer binary...
[2026-03-25 10:00:36] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 10:00:36] apptainer is not installed, using version from CVMFS
[2026-03-25 10:00:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 10:00:36] WARNING: Environment variable TMPDIR already has value [/tmp/job_11392884/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node052
[2026-03-25 10:00:36] apptainer works
[2026-03-25 10:00:36] Set ATHENA_PROC_NUMBER=8
[2026-03-25 10:00:36] Set ATHENA_CORE_NUMBER=8
[2026-03-25 10:00:36] Starting ATLAS job with PandaID=7056985739
[2026-03-25 10:00:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11392884/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 11:43:59]  *** The last 200 lines of the pilot log: ***
[2026-03-25 11:43:59] 2026-03-25 10:43:24,546 | INFO     | mean y: 2536822.9479166665
[2026-03-25 11:43:59] 2026-03-25 10:43:24,546 | INFO     | intersect: -6524801883.232823
[2026-03-25 11:43:59] 2026-03-25 10:43:24,546 | INFO     | chi2: 0.0015456447437734154
[2026-03-25 11:43:59] 2026-03-25 10:43:24,546 | INFO     | current chi2=0.0015456447437734154 (change=99.86717314375103 %)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,546 | INFO     | sum of square deviations: 233641590.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,546 | INFO     | sum of deviations: 787985189.9999996
[2026-03-25 11:43:59] 2026-03-25 10:43:24,546 | INFO     | mean x: 1774432615.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | mean y: 2537618.164835165
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | intersect: -5981956072.675787
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | chi2: 0.001080054369401525
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | current chi2=0.001080054369401525 (change=30.122728799583964 %)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | sum of square deviations: 197203697.5
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | sum of deviations: 1005781206.5
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | mean x: 1774432767.5
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | mean y: 2536698.081395349
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | intersect: -9047451473.409576
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | chi2: 0.00047187483453718225
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | current chi2=0.00047187483453718225 (change=56.31008513037584 %)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,547 | INFO     | sum of square deviations: 164765880.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | sum of deviations: 650323135.0000001
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | mean x: 1774432920.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | mean y: 2538362.5555555555
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | intersect: -7001064442.719447
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | chi2: 0.00025233984683333563
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | current chi2=0.00025233984683333563 (change=46.52398721774767 %)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | sum of square deviations: 136095575.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | sum of deviations: 371671688.49999994
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | mean x: 1774433072.5
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | mean y: 2539844.486842105
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | intersect: -4843367424.623985
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | chi2: 7.107698213637288e-05
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | current chi2=7.107698213637288e-05 (change=71.83283455691503 %)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,548 | INFO     | sum of square deviations: 110960220.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | sum of deviations: 250697311.99999997
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | mean x: 1774433225.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | mean y: 2540568.352112676
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | intersect: -4006514567.1819654
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | chi2: 2.8999830994466698e-05
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | current chi2=2.8999830994466698e-05 (change=59.19940587963378 %)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | sum of square deviations: 89127252.5
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | sum of deviations: 181048915.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | mean x: 1774433377.5
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | mean y: 2541050.9696969697
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | intersect: -3601959578.466405
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | chi2: 2.2847552196811338e-05
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | current chi2=2.2847552196811338e-05 (change=21.214878110252585 %)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | left removable region: 70
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | sum of square deviations: 4837300.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,549 | INFO     | sum of deviations: -2034777.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | mean x: 1774434262.0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | mean y: 2543685.64
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | intersect: 748947262.91029
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | chi2: 4.654572108163467e-06
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | current memory leak: -0.42 B/s (using 25 data points, chi2=0.00)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | could have reported an average CPU frequency of 3034 MHz (7 samples)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | ..............................
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | . Timing measurements:
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | . get job = 0 s
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | . initial setup = 2 s
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | . payload setup = 3 s
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | . stage-in = 0 s
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | . payload execution = 6138 s
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | . stage-out = 0 s
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | . log creation = 0 s
[2026-03-25 11:43:59] 2026-03-25 10:43:24,550 | INFO     | ..............................
[2026-03-25 11:43:59] 2026-03-25 10:43:24,596 | INFO     | 
[2026-03-25 11:43:59] 2026-03-25 10:43:24,596 | INFO     | job summary report
[2026-03-25 11:43:59] 2026-03-25 10:43:24,596 | INFO     | --------------------------------------------------
[2026-03-25 11:43:59] 2026-03-25 10:43:24,596 | INFO     | PanDA job id: 7056985739
[2026-03-25 11:43:59] 2026-03-25 10:43:24,596 | INFO     | task id: 49182624
[2026-03-25 11:43:59] 2026-03-25 10:43:24,596 | INFO     | errors: (none)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,596 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | pilot state: finished 
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | transexitcode: 0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | exeerrorcode: 0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | exeerrordiag: 
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | exitcode: 0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | exitmsg: OK
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | cpuconsumptiontime: 44818 s
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | nevents: 400
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | neventsw: 0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | pid: 7742
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | pgrp: 7742
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | corecount: 8
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | event service: False
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | sizes: {0: 2279851, 1: 2280479, 11: 2280479, 6146: 2307472, 6147: 2316500, 6149: 2316556, 6151: 2316878}
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | --------------------------------------------------
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | 
[2026-03-25 11:43:59] 2026-03-25 10:43:24,597 | INFO     | executing command: ls -lF /tmp/job_11392884/atlas/pilot/slots/0
[2026-03-25 11:43:59] 2026-03-25 10:43:24,606 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,606 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | job 7056985739 has completed (purged errors)
[2026-03-25 11:43:59] 2026-03-25 10:43:24,607 | INFO     | overall cleanup function is called
[2026-03-25 11:43:59] 2026-03-25 10:43:25,611 | INFO     | --- collectZombieJob: --- 10, [7742]
[2026-03-25 11:43:59] 2026-03-25 10:43:25,611 | INFO     | zombie collector waiting for pid 7742
[2026-03-25 11:43:59] 2026-03-25 10:43:25,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 11:43:59] 2026-03-25 10:43:25,611 | INFO     | collected zombie processes
[2026-03-25 11:43:59] 2026-03-25 10:43:25,611 | INFO     | will attempt to kill all subprocesses of pid=7742
[2026-03-25 11:43:59] 2026-03-25 10:43:25,717 | INFO     | process IDs to be killed: [7742] (in reverse order)
[2026-03-25 11:43:59] 2026-03-25 10:43:25,754 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 11:43:59] 2026-03-25 10:43:25,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 11:43:59] 2026-03-25 10:43:25,758 | INFO     | did not find any defunct processes belonging to 7742
[2026-03-25 11:43:59] 2026-03-25 10:43:25,761 | INFO     | did not find any defunct processes belonging to 7742
[2026-03-25 11:43:59] 2026-03-25 10:43:25,762 | INFO     | ready for new job
[2026-03-25 11:43:59] 2026-03-25 10:43:25,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 11:43:59] 2026-03-25 10:43:25,762 | INFO     | **************************************
[2026-03-25 11:43:59] 2026-03-25 10:43:25,762 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 11:43:59] 2026-03-25 10:43:25,762 | INFO     | **************************************
[2026-03-25 11:43:59] 2026-03-25 10:43:25,762 | INFO     | 
[2026-03-25 11:43:59] 2026-03-25 10:43:25,777 | INFO     | architecture information:
[2026-03-25 11:43:59] 2026-03-25 10:43:25,777 | INFO     | executing command: cat /etc/os-release
[2026-03-25 11:43:59] 2026-03-25 10:43:25,783 | INFO     | cat /etc/os-release:
[2026-03-25 11:43:59] NAME="CentOS Linux"
[2026-03-25 11:43:59] VERSION="7 (Core)"
[2026-03-25 11:43:59] ID="centos"
[2026-03-25 11:43:59] ID_LIKE="rhel fedora"
[2026-03-25 11:43:59] VERSION_ID="7"
[2026-03-25 11:43:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 11:43:59] ANSI_COLOR="0;31"
[2026-03-25 11:43:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 11:43:59] HOME_URL="https://www.centos.org/"
[2026-03-25 11:43:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 11:43:59] 
[2026-03-25 11:43:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 11:43:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 11:43:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 11:43:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 11:43:59] 
[2026-03-25 11:43:59] 2026-03-25 10:43:25,783 | INFO     | **************************************
[2026-03-25 11:43:59] 2026-03-25 10:43:26,285 | INFO     | executing command: df -mP /tmp/job_11392884/atlas/pilot/slots/0
[2026-03-25 11:43:59] 2026-03-25 10:43:26,292 | INFO     | sufficient remaining disk space (223134875648 B)
[2026-03-25 11:43:59] 2026-03-25 10:43:26,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 11:43:59] 2026-03-25 10:43:26,292 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 11:43:59] 2026-03-25 10:43:26,293 | INFO     | update_server=False
[2026-03-25 11:43:59] 2026-03-25 10:43:26,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 11:43:59] 2026-03-25 10:43:26,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:43:59] 2026-03-25 10:43:26,293 | INFO     | aborting loop
[2026-03-25 11:43:59] 2026-03-25 10:43:26,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:43:59] 2026-03-25 10:43:26,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 11:43:59] 2026-03-25 10:43:26,755 | INFO     | all job control threads have been joined
[2026-03-25 11:43:59] 2026-03-25 10:43:26,971 | INFO     | all payload control threads have been joined
[2026-03-25 11:43:59] 2026-03-25 10:43:27,297 | INFO     | [job] queue monitor thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,298 | INFO     | [job] retrieve thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,298 | INFO     | [job] job monitor thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,347 | INFO     | all data control threads have been joined
[2026-03-25 11:43:59] 2026-03-25 10:43:27,388 | INFO     | [payload] failed_post thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,402 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,526 | INFO     | [job] validate thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,570 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,760 | INFO     | [job] control thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,790 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,878 | INFO     | [data] copytool_in thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:27,975 | INFO     | [payload] control thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:28,087 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:28,298 | INFO     | [data] copytool_out thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:28,352 | INFO     | [data] control thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:28,633 | INFO     | [payload] validate_post thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:29,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 11:43:59] 2026-03-25 10:43:33,242 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 11:43:59] 2026-03-25 10:43:52,866 | INFO     | [monitor] cgroup control has ended
[2026-03-25 11:43:59] 2026-03-25 10:43:53,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-25 11:43:59] 2026-03-25 10:43:55,999 | INFO     | PID=3013 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-25 11:43:59] 2026-03-25 10:43:56,000 | INFO     | .. there are 6 such processes running
[2026-03-25 11:43:59] 2026-03-25 10:43:56,000 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 11:43:59] 2026-03-25 10:43:56,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 11:43:59] 2026-03-25 10:43:56,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 11:43:59] 2026-03-25 10:43:56,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 11:43:59] 2026-03-25 10:43:56,000 | INFO     | [monitor] control thread has ended
[2026-03-25 11:43:59] 2026-03-25 10:43:58,896 | INFO     | all workflow threads have been joined
[2026-03-25 11:43:59] 2026-03-25 10:43:58,896 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 11:43:59] 2026-03-25 10:43:58,896 | INFO     | traces error code: 0
[2026-03-25 11:43:59] 2026-03-25 10:43:58,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 11:43:59] 2026-03-25 10:43:58,946 [wrapper] ==== pilot stdout END ====
[2026-03-25 11:43:59] 2026-03-25 10:43:58,948 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 11:43:59] 2026-03-25 10:43:58,949 [wrapper] pilotpid: 3013
[2026-03-25 11:43:59] 2026-03-25 10:43:58,950 [wrapper] Pilot exit status: 0
[2026-03-25 11:43:59] 2026-03-25 10:43:58,954 [wrapper] pandaids: 7056985739
[2026-03-25 11:43:59] 2026-03-25 10:43:58,977 [wrapper] cleanup supervisor_pilot  6206 3014
[2026-03-25 11:43:59] 2026-03-25 10:43:58,979 [wrapper] Test setup, not cleaning
[2026-03-25 11:43:59] 2026-03-25 10:43:58,980 [wrapper] apfmon messages muted
[2026-03-25 11:43:59] 2026-03-25 10:43:58,981 [wrapper] ==== wrapper stdout END ====
[2026-03-25 11:43:59] 2026-03-25 10:43:58,982 [wrapper] ==== wrapper stderr END ====
[2026-03-25 11:43:59]  *** Error codes and diagnostics ***
[2026-03-25 11:43:59]     "exeErrorCode": 0,
[2026-03-25 11:43:59]     "exeErrorDiag": "",
[2026-03-25 11:43:59]     "pilotErrorCode": 0,
[2026-03-25 11:43:59]     "pilotErrorDiag": "",
[2026-03-25 11:43:59]  *** Listing of results directory ***
[2026-03-25 11:43:59] total 478740
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user    585013 Mar 16 22:25 pilot3.tar.gz
[2026-03-25 11:43:59] -rwx------ 1 mf493845 unix-user     36322 Mar 16 22:26 runpilot2-wrapper.sh
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user      5111 Mar 16 22:26 queuedata.json
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user       100 Mar 25 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 11:43:59] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 08:56 run_atlas
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user       105 Mar 25 08:56 job.xml
[2026-03-25 11:43:59] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 10:00 start_atlas.sh
[2026-03-25 11:43:59] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 10:00 shared
[2026-03-25 11:43:59] -rw-r--r-- 2 mf493845 unix-user    597536 Mar 25 10:00 input.tar.gz
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user      6390 Mar 25 10:00 init_data.xml
[2026-03-25 11:43:59] -rw-r--r-- 2 mf493845 unix-user 251223171 Mar 25 10:00 EVNT.49137656._000002.pool.root.1
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user         0 Mar 25 10:00 boinc_setup_complete
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user      8192 Mar 25 10:00 boinc_mmap_file
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user         0 Mar 25 10:00 boinc_lockfile
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user      2630 Mar 25 10:00 pandaJob.out
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user   1010820 Mar 25 10:00 agis_schedconf.cvmfs.json
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user   1511579 Mar 25 10:00 agis_ddmendpoints.agis.ALL.json
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user       419 Mar 25 10:00 workernode_map.json
[2026-03-25 11:43:59] drwx------ 5 mf493845 unix-user       440 Mar 25 10:00 pilot3
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user 232549267 Mar 25 11:42 HITS.49182624._000044.pool.root.1
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user        95 Mar 25 11:43 pilot_heartbeat.json
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user      1011 Mar 25 11:43 memory_monitor_summary.json
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user    353779 Mar 25 11:43 log.49182624._000044.job.log.tgz.1
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user      6292 Mar 25 11:43 heartbeat.json
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user      4830 Mar 25 11:43 pilotlog.txt
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user    918295 Mar 25 11:43 log.49182624._000044.job.log.1
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user       357 Mar 25 11:43 output.list
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user       620 Mar 25 11:43 runtime_log
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user   1290240 Mar 25 11:43 result.tar.gz
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user      9219 Mar 25 11:43 runtime_log.err
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user       644 Mar 25 11:43 IcNLDmSdUM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm47yLDmiqa1Mo.diag
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user     21374 Mar 25 11:43 stderr.txt
[2026-03-25 11:43:59] HITS file was successfully produced:
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user 232549267 Mar 25 11:42 shared/HITS.pool.root.1
[2026-03-25 11:43:59]  *** Contents of shared directory: ***
[2026-03-25 11:43:59] total 474296
[2026-03-25 11:43:59] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 10:00 start_atlas.sh
[2026-03-25 11:43:59] -rw-r--r-- 2 mf493845 unix-user    597536 Mar 25 10:00 input.tar.gz
[2026-03-25 11:43:59] -rw-r--r-- 2 mf493845 unix-user 251223171 Mar 25 10:00 ATLAS.root_0
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user 232549267 Mar 25 11:42 HITS.pool.root.1
[2026-03-25 11:43:59] -rw------- 1 mf493845 unix-user   1290240 Mar 25 11:43 result.tar.gz
11:44:00 (31459): run_atlas exited; CPU time 44910.917824
11:44:00 (31459): called boinc_finish(0)

</stderr_txt>
]]>

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