Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:48:08 (22676): wrapper (7.7.26015): starting
09:48:08 (22676): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 09:48:08] Arguments: --nthreads 8
[2026-03-25 09:48:08] Threads: 8
[2026-03-25 09:48:08] Checking for CVMFS
[2026-03-25 09:48:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 09:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 09:48:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 09:48:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 09:48:08] 2.11.0.0 8101 236812 112404 157676 1 188 3875111 4096000 2747 130560 3 19861516 99.679 13275463 385 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 09:48:08] CVMFS is ok
[2026-03-25 09:48:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 09:48:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 09:48:08] Further information can be found at the LHC@home message board.
[2026-03-25 09:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 09:48:08] Checking for apptainer binary...
[2026-03-25 09:48:08] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 09:48:08] apptainer is not installed, using version from CVMFS
[2026-03-25 09:48:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 09:48:09] WARNING: Environment variable TMPDIR already has value [/tmp/job_11392831/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node232
[2026-03-25 09:48:09] apptainer works
[2026-03-25 09:48:09] Set ATHENA_PROC_NUMBER=8
[2026-03-25 09:48:09] Set ATHENA_CORE_NUMBER=8
[2026-03-25 09:48:09] Starting ATLAS job with PandaID=7056986372
[2026-03-25 09:48:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11392831/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 11:49:32]  *** The last 200 lines of the pilot log: ***
[2026-03-25 11:49:32] 2026-03-25 10:48:54,205 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,206 | INFO     | log transfer has been attempted: DONE
[2026-03-25 11:49:32] 2026-03-25 10:48:54,206 | INFO     | job 7056986372 has finished - writing final server update
[2026-03-25 11:49:32] 2026-03-25 10:48:54,206 | INFO     | total number of processed events: 400 (read)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,223 | INFO     | using path: /tmp/job_11392831/atlas/pilot/slots/0/PanDA_Pilot-7056986372/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,223 | INFO     | extracted standard info from prmon json
[2026-03-25 11:49:32] 2026-03-25 10:48:54,223 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 11:49:32] 2026-03-25 10:48:54,224 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 11:49:32] 2026-03-25 10:48:54,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 11:49:32] 2026-03-25 10:48:54,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 11:49:32] 2026-03-25 10:48:54,225 | INFO     | fitting pss+swap vs Time
[2026-03-25 11:49:32] 2026-03-25 10:48:54,225 | INFO     | sum of square deviations: 522502820.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,225 | INFO     | sum of deviations: 9441021850.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,225 | INFO     | mean x: 1774432111.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,225 | INFO     | mean y: 2489018.6386554623
[2026-03-25 11:49:32] 2026-03-25 10:48:54,225 | INFO     | intersect: -32059447663.909054
[2026-03-25 11:49:32] 2026-03-25 10:48:54,226 | INFO     | chi2: 1.8433529444056747
[2026-03-25 11:49:32] 2026-03-25 10:48:54,226 | INFO     | sum of square deviations: 459366752.5
[2026-03-25 11:49:32] 2026-03-25 10:48:54,226 | INFO     | sum of deviations: 16100597572.5
[2026-03-25 11:49:32] 2026-03-25 10:48:54,226 | INFO     | mean x: 1774431958.5
[2026-03-25 11:49:32] 2026-03-25 10:48:54,226 | INFO     | mean y: 2504485.3245614036
[2026-03-25 11:49:32] 2026-03-25 10:48:54,226 | INFO     | intersect: -62190535668.558846
[2026-03-25 11:49:32] 2026-03-25 10:48:54,226 | INFO     | chi2: 1.158566645961931
[2026-03-25 11:49:32] 2026-03-25 10:48:54,226 | INFO     | current chi2=1.158566645961931 (change=37.148951888024314 %)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,226 | INFO     | sum of square deviations: 401533110.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | sum of deviations: 15112937209.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | mean x: 1774431806.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | mean y: 2501880.5504587158
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | intersect: -66783712749.99512
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | chi2: 1.1600619291363703
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | current chi2=1.1600619291363703 (change=-0.12906319888035062 %)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | right removable region: 108
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | sum of square deviations: 459366752.5
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | sum of deviations: -5543761648.500002
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | mean x: 1774432263.5
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | mean y: 2524545.5701754387
[2026-03-25 11:49:32] 2026-03-25 10:48:54,227 | INFO     | intersect: 21416850847.41186
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | chi2: 0.7124121998870427
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | current chi2=0.7124121998870427 (change=61.3523713920811 %)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | sum of square deviations: 401533110.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | sum of deviations: -5902463395.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | mean x: 1774432416.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | mean y: 2525471.972477064
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | intersect: 26086357966.73589
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | chi2: 0.7119791252289652
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | current chi2=0.7119791252289652 (change=0.06078989918283001 %)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | left removable region: 20
[2026-03-25 11:49:32] 2026-03-25 10:48:54,228 | INFO     | sum of square deviations: 211285822.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | sum of deviations: 984174610.0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | mean x: 1774432385.5
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | mean y: 2541285.2045454546
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | intersect: -8262808866.737179
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | chi2: 0.0025055061638086028
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | current memory leak: 4.66 B/s (using 88 data points, chi2=0.00)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | could have reported an average CPU frequency of 2426 MHz (8 samples)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | ..............................
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | . Timing measurements:
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | . get job = 0 s
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | . initial setup = 2 s
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | . payload setup = 3 s
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | . stage-in = 0 s
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | . payload execution = 7215 s
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | . stage-out = 0 s
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | . log creation = 0 s
[2026-03-25 11:49:32] 2026-03-25 10:48:54,229 | INFO     | ..............................
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | 
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | job summary report
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | --------------------------------------------------
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | PanDA job id: 7056986372
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | task id: 49182650
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | errors: (none)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | pilot state: finished 
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | transexitcode: 0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | exeerrorcode: 0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | exeerrordiag: 
[2026-03-25 11:49:32] 2026-03-25 10:48:54,276 | INFO     | exitcode: 0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | exitmsg: OK
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | cpuconsumptiontime: 52942 s
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | nevents: 400
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | neventsw: 0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | pid: 11858
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | pgrp: 11858
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | corecount: 8
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | event service: False
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | sizes: {0: 2280449, 11: 2280449, 7222: 2307962, 7223: 2316990, 7226: 2317046, 7228: 2317240}
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | --------------------------------------------------
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | 
[2026-03-25 11:49:32] 2026-03-25 10:48:54,277 | INFO     | executing command: ls -lF /tmp/job_11392831/atlas/pilot/slots/0
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | job 7056986372 has completed (purged errors)
[2026-03-25 11:49:32] 2026-03-25 10:48:54,287 | INFO     | overall cleanup function is called
[2026-03-25 11:49:32] 2026-03-25 10:48:55,293 | INFO     | --- collectZombieJob: --- 10, [11858]
[2026-03-25 11:49:32] 2026-03-25 10:48:55,293 | INFO     | zombie collector waiting for pid 11858
[2026-03-25 11:49:32] 2026-03-25 10:48:55,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 11:49:32] 2026-03-25 10:48:55,293 | INFO     | collected zombie processes
[2026-03-25 11:49:32] 2026-03-25 10:48:55,293 | INFO     | will attempt to kill all subprocesses of pid=11858
[2026-03-25 11:49:32] 2026-03-25 10:48:55,387 | INFO     | process IDs to be killed: [11858] (in reverse order)
[2026-03-25 11:49:32] 2026-03-25 10:48:55,420 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 11:49:32] 2026-03-25 10:48:55,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 11:49:32] 2026-03-25 10:48:55,424 | INFO     | did not find any defunct processes belonging to 11858
[2026-03-25 11:49:32] 2026-03-25 10:48:55,427 | INFO     | did not find any defunct processes belonging to 11858
[2026-03-25 11:49:32] 2026-03-25 10:48:55,427 | INFO     | ready for new job
[2026-03-25 11:49:32] 2026-03-25 10:48:55,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 11:49:32] 2026-03-25 10:48:55,427 | INFO     | **************************************
[2026-03-25 11:49:32] 2026-03-25 10:48:55,428 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 11:49:32] 2026-03-25 10:48:55,428 | INFO     | **************************************
[2026-03-25 11:49:32] 2026-03-25 10:48:55,428 | INFO     | 
[2026-03-25 11:49:32] 2026-03-25 10:48:55,442 | INFO     | architecture information:
[2026-03-25 11:49:32] 2026-03-25 10:48:55,442 | INFO     | executing command: cat /etc/os-release
[2026-03-25 11:49:32] 2026-03-25 10:48:55,448 | INFO     | cat /etc/os-release:
[2026-03-25 11:49:32] NAME="CentOS Linux"
[2026-03-25 11:49:32] VERSION="7 (Core)"
[2026-03-25 11:49:32] ID="centos"
[2026-03-25 11:49:32] ID_LIKE="rhel fedora"
[2026-03-25 11:49:32] VERSION_ID="7"
[2026-03-25 11:49:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 11:49:32] ANSI_COLOR="0;31"
[2026-03-25 11:49:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 11:49:32] HOME_URL="https://www.centos.org/"
[2026-03-25 11:49:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 11:49:32] 
[2026-03-25 11:49:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 11:49:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 11:49:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 11:49:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 11:49:32] 
[2026-03-25 11:49:32] 2026-03-25 10:48:55,448 | INFO     | **************************************
[2026-03-25 11:49:32] 2026-03-25 10:48:55,951 | INFO     | executing command: df -mP /tmp/job_11392831/atlas/pilot/slots/0
[2026-03-25 11:49:32] 2026-03-25 10:48:55,956 | INFO     | sufficient remaining disk space (225106198528 B)
[2026-03-25 11:49:32] 2026-03-25 10:48:55,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 11:49:32] 2026-03-25 10:48:55,956 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 11:49:32] 2026-03-25 10:48:55,956 | INFO     | update_server=False
[2026-03-25 11:49:32] 2026-03-25 10:48:55,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 11:49:32] 2026-03-25 10:48:55,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 11:49:32] 2026-03-25 10:48:55,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:49:32] 2026-03-25 10:48:56,114 | INFO     | all payload control threads have been joined
[2026-03-25 11:49:32] 2026-03-25 10:48:56,320 | INFO     | all data control threads have been joined
[2026-03-25 11:49:32] 2026-03-25 10:48:56,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:49:32] 2026-03-25 10:48:56,580 | INFO     | aborting loop
[2026-03-25 11:49:32] 2026-03-25 10:48:56,962 | INFO     | [job] retrieve thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:56,962 | INFO     | [job] queue monitor thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:57,120 | INFO     | [payload] control thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:57,325 | INFO     | [data] control thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:57,370 | INFO     | [payload] validate_post thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:57,494 | INFO     | all job control threads have been joined
[2026-03-25 11:49:32] 2026-03-25 10:48:57,585 | INFO     | [job] job monitor thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:57,937 | INFO     | [job] validate thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:57,962 | INFO     | [data] copytool_out thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:57,976 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:57,997 | INFO     | [payload] failed_post thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:58,128 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:58,192 | INFO     | [data] copytool_in thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:58,318 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:58,339 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:58,499 | INFO     | [job] control thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:48:58,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 11:49:32] 2026-03-25 10:49:02,513 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 11:49:32] 2026-03-25 10:49:26,103 | INFO     | PID=28840 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 11:49:32] 2026-03-25 10:49:26,103 | INFO     | .. there are 3 such processes running
[2026-03-25 11:49:32] 2026-03-25 10:49:26,103 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 11:49:32] 2026-03-25 10:49:26,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 11:49:32] 2026-03-25 10:49:26,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 11:49:32] 2026-03-25 10:49:26,851 | INFO     | [monitor] cgroup control has ended
[2026-03-25 11:49:32] 2026-03-25 10:49:26,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058988288)>']
[2026-03-25 11:49:32] 2026-03-25 10:49:27,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 11:49:32] 2026-03-25 10:49:27,108 | INFO     | [monitor] control thread has ended
[2026-03-25 11:49:32] 2026-03-25 10:49:31,880 | INFO     | all workflow threads have been joined
[2026-03-25 11:49:32] 2026-03-25 10:49:31,880 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 11:49:32] 2026-03-25 10:49:31,880 | INFO     | traces error code: 0
[2026-03-25 11:49:32] 2026-03-25 10:49:31,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 11:49:32] 2026-03-25 10:49:31,932 [wrapper] ==== pilot stdout END ====
[2026-03-25 11:49:32] 2026-03-25 10:49:31,933 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 11:49:32] 2026-03-25 10:49:31,935 [wrapper] pilotpid: 28840
[2026-03-25 11:49:32] 2026-03-25 10:49:31,936 [wrapper] Pilot exit status: 0
[2026-03-25 11:49:32] 2026-03-25 10:49:31,940 [wrapper] pandaids: 7056986372
[2026-03-25 11:49:32] 2026-03-25 10:49:31,961 [wrapper] cleanup supervisor_pilot 12433 28841
[2026-03-25 11:49:32] 2026-03-25 10:49:31,962 [wrapper] Test setup, not cleaning
[2026-03-25 11:49:32] 2026-03-25 10:49:31,964 [wrapper] apfmon messages muted
[2026-03-25 11:49:32] 2026-03-25 10:49:31,965 [wrapper] ==== wrapper stdout END ====
[2026-03-25 11:49:32] 2026-03-25 10:49:31,966 [wrapper] ==== wrapper stderr END ====
[2026-03-25 11:49:32]  *** Error codes and diagnostics ***
[2026-03-25 11:49:32]     "exeErrorCode": 0,
[2026-03-25 11:49:32]     "exeErrorDiag": "",
[2026-03-25 11:49:32]     "pilotErrorCode": 0,
[2026-03-25 11:49:32]     "pilotErrorDiag": "",
[2026-03-25 11:49:32]  *** Listing of results directory ***
[2026-03-25 11:49:32] total 485376
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user    585013 Mar 16 22:25 pilot3.tar.gz
[2026-03-25 11:49:32] -rwx------ 1 mf493845 unix-user     36322 Mar 16 22:29 runpilot2-wrapper.sh
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user      5111 Mar 16 22:30 queuedata.json
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user       100 Mar 25 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 11:49:32] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 08:46 run_atlas
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user       105 Mar 25 08:46 job.xml
[2026-03-25 11:49:32] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:48 start_atlas.sh
[2026-03-25 11:49:32] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 09:48 shared
[2026-03-25 11:49:32] -rw-r--r-- 2 mf493845 unix-user    597550 Mar 25 09:48 input.tar.gz
[2026-03-25 11:49:32] -rw-r--r-- 2 mf493845 unix-user 241809929 Mar 25 09:48 EVNT.49137741._000018.pool.root.1
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user         0 Mar 25 09:48 boinc_setup_complete
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user      6391 Mar 25 09:48 init_data.xml
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user      8192 Mar 25 09:48 boinc_mmap_file
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user         0 Mar 25 09:48 boinc_lockfile
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user      2632 Mar 25 09:48 pandaJob.out
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user   1010820 Mar 25 09:48 agis_schedconf.cvmfs.json
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user   1511579 Mar 25 09:48 agis_ddmendpoints.agis.ALL.json
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user       416 Mar 25 09:48 workernode_map.json
[2026-03-25 11:49:32] drwx------ 5 mf493845 unix-user       440 Mar 25 09:48 pilot3
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user 248465753 Mar 25 11:48 HITS.49182650._000427.pool.root.1
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user      1017 Mar 25 11:48 memory_monitor_summary.json
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user    350569 Mar 25 11:48 log.49182650._000427.job.log.tgz.1
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user        95 Mar 25 11:48 pilot_heartbeat.json
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user      6296 Mar 25 11:48 heartbeat.json
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user      4831 Mar 25 11:49 pilotlog.txt
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user   1069281 Mar 25 11:49 log.49182650._000427.job.log.1
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user       357 Mar 25 11:49 output.list
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user       620 Mar 25 11:49 runtime_log
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user   1433600 Mar 25 11:49 result.tar.gz
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user      9219 Mar 25 11:49 runtime_log.err
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user       643 Mar 25 11:49 k8pKDmQgUM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzAwLDm0LRZVn.diag
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user     21496 Mar 25 11:49 stderr.txt
[2026-03-25 11:49:32] HITS file was successfully produced:
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user 248465753 Mar 25 11:48 shared/HITS.pool.root.1
[2026-03-25 11:49:32]  *** Contents of shared directory: ***
[2026-03-25 11:49:32] total 480788
[2026-03-25 11:49:32] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:48 start_atlas.sh
[2026-03-25 11:49:32] -rw-r--r-- 2 mf493845 unix-user    597550 Mar 25 09:48 input.tar.gz
[2026-03-25 11:49:32] -rw-r--r-- 2 mf493845 unix-user 241809929 Mar 25 09:48 ATLAS.root_0
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user 248465753 Mar 25 11:48 HITS.pool.root.1
[2026-03-25 11:49:32] -rw------- 1 mf493845 unix-user   1433600 Mar 25 11:49 result.tar.gz
11:49:33 (22676): run_atlas exited; CPU time 53055.130663
11:49:33 (22676): called boinc_finish(0)

</stderr_txt>
]]>

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