Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
21:15:25 (1455046): wrapper (7.7.26015): starting
21:15:25 (1455046): wrapper: running run_atlas (--nthreads 12)
[2026-03-25 21:15:25] Arguments: --nthreads 12
[2026-03-25 21:15:25] Threads: 12
[2026-03-25 21:15:25] Checking for CVMFS
[2026-03-25 21:15:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 21:15:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 21:15:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 21:15:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 21:15:27] 2.12.7.0 2438426 4840 69564 157702 0 188 2259334 4194305 2751 130560 0 8920867 99.965 332856 2590 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-03-25 21:15:27] CVMFS is ok
[2026-03-25 21:15:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 21:15:27] Checking for apptainer binary...
[2026-03-25 21:15:27] apptainer is not installed, using version from CVMFS
[2026-03-25 21:15:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 21:15:27] Trebeth
[2026-03-25 21:15:27] apptainer works
[2026-03-25 21:15:27] Set ATHENA_PROC_NUMBER=12
[2026-03-25 21:15:27] Set ATHENA_CORE_NUMBER=12
[2026-03-25 21:15:27] Starting ATLAS job with PandaID=7057025995
[2026-03-25 21:15:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 22:55:03]  *** The last 200 lines of the pilot log: ***
[2026-03-25 22:55:03]  guid=8e1ab029-2345-4858-a07f-da0d4275dca2
[2026-03-25 22:55:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-25 22:55:03]  is_altstaged=None
[2026-03-25 22:55:03]  is_tar=False
[2026-03-25 22:55:03]  lfn=log.49176446._000021.job.log.tgz.1
[2026-03-25 22:55:03]  mtime=0
[2026-03-25 22:55:03]  protocol_id=None
[2026-03-25 22:55:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-25 22:55:03]  replicas=None
[2026-03-25 22:55:03]  scope=mc23_13p6TeV
[2026-03-25 22:55:03]  status=None
[2026-03-25 22:55:03]  status_code=0
[2026-03-25 22:55:03]  storage_token=
[2026-03-25 22:55:03]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7057025995/log.49176446._000021.job.log.tgz.1
[2026-03-25 22:55:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/3d/log.49176446._000021.job.log.tgz.1
[2026-03-25 22:55:03]  workdir=None
[2026-03-25 22:55:03] ]
[2026-03-25 22:55:03] 2026-03-26 02:54:34,928 | INFO     | transferring file log.49176446._000021.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7057025995/log.49176446._000021.job.log.tgz.1 to /var/lib/boinc
[2026-03-25 22:55:03] 2026-03-26 02:54:34,929 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7057025995/log.49176446._000021.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.491764
[2026-03-25 22:55:03] 2026-03-26 02:54:34,942 | INFO     | adding to output.list: log.49176446._000021.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/3d/log.49176446._000021.job.log.tg
[2026-03-25 22:55:03] 2026-03-26 02:54:34,943 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-25 22:55:03] 2026-03-26 02:54:34,943 | INFO     | summary of transferred files:
[2026-03-25 22:55:03] 2026-03-26 02:54:34,943 | INFO     |  -- lfn=log.49176446._000021.job.log.tgz.1, status_code=0, status=transferred
[2026-03-25 22:55:03] 2026-03-26 02:54:34,943 | INFO     | stage-out finished correctly
[2026-03-25 22:55:03] 2026-03-26 02:54:35,160 | INFO     | monitor loop #444: job 0:7057025995 is in state 'finished'
[2026-03-25 22:55:03] 2026-03-26 02:54:35,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-25 22:55:03] 2026-03-26 02:54:35,259 | INFO     | time since job start (5928s) is within the limit (345600.0s)
[2026-03-25 22:55:03] 2026-03-26 02:54:35,326 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-25 22:55:03] 2026-03-26 02:54:37,205 | INFO     | job 7057025995 has state=finished
[2026-03-25 22:55:03] 2026-03-26 02:54:37,205 | INFO     | preparing for final server update for job 7057025995 in state='finished'
[2026-03-25 22:55:03] 2026-03-26 02:54:37,205 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7057025995/jobReport.json
[2026-03-25 22:55:03] 2026-03-26 02:54:37,208 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-25 22:55:03] 2026-03-26 02:54:37,208 | INFO     | this job has now completed (state=finished)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,208 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,208 | INFO     | log transfer has been attempted: DONE
[2026-03-25 22:55:03] 2026-03-26 02:54:37,208 | INFO     | job 7057025995 has finished - writing final server update
[2026-03-25 22:55:03] 2026-03-26 02:54:37,209 | INFO     | total number of processed events: 400 (read)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,218 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7057025995/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,218 | INFO     | extracted standard info from prmon json
[2026-03-25 22:55:03] 2026-03-26 02:54:37,218 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 22:55:03] 2026-03-26 02:54:37,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 22:55:03] 2026-03-26 02:54:37,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 22:55:03] 2026-03-26 02:54:37,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 22:55:03] 2026-03-26 02:54:37,221 | INFO     | fitting pss+swap vs Time
[2026-03-25 22:55:03] 2026-03-26 02:54:37,221 | INFO     | sum of square deviations: 226022842.5
[2026-03-25 22:55:03] 2026-03-26 02:54:37,222 | INFO     | sum of deviations: -15541359302.000002
[2026-03-25 22:55:03] 2026-03-26 02:54:37,222 | INFO     | mean x: 1774490792.5
[2026-03-25 22:55:03] 2026-03-26 02:54:37,222 | INFO     | mean y: 2844802.777777778
[2026-03-25 22:55:03] 2026-03-26 02:54:37,222 | INFO     | intersect: 122017056637.73082
[2026-03-25 22:55:03] 2026-03-26 02:54:37,222 | INFO     | chi2: 0.19308025898959796
[2026-03-25 22:55:03] 2026-03-26 02:54:37,222 | INFO     | current memory leak: -68.76 B/s (using 90 data points, chi2=0.19)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | could have reported an average CPU frequency of 2726 MHz (7 samples)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | ..............................
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | . Timing measurements:
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | . get job = 0 s
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | . initial setup = 7 s
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | . payload setup = 9 s
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | . stage-in = 0 s
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | . payload execution = 5902 s
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | . stage-out = 0 s
[2026-03-25 22:55:03] 2026-03-26 02:54:37,223 | INFO     | . log creation = 0 s
[2026-03-25 22:55:03] 2026-03-26 02:54:37,224 | INFO     | ..............................
[2026-03-25 22:55:03] 2026-03-26 02:54:37,267 | INFO     | time since job start (5930s) is within the limit (345600.0s)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,615 | INFO     | 
[2026-03-25 22:55:03] 2026-03-26 02:54:37,615 | INFO     | job summary report
[2026-03-25 22:55:03] 2026-03-26 02:54:37,615 | INFO     | --------------------------------------------------
[2026-03-25 22:55:03] 2026-03-26 02:54:37,615 | INFO     | PanDA job id: 7057025995
[2026-03-25 22:55:03] 2026-03-26 02:54:37,616 | INFO     | task id: 49176446
[2026-03-25 22:55:03] 2026-03-26 02:54:37,616 | INFO     | errors: (none)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,616 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 22:55:03] 2026-03-26 02:54:37,616 | INFO     | pilot state: finished 
[2026-03-25 22:55:03] 2026-03-26 02:54:37,616 | INFO     | transexitcode: 0
[2026-03-25 22:55:03] 2026-03-26 02:54:37,616 | INFO     | exeerrorcode: 0
[2026-03-25 22:55:03] 2026-03-26 02:54:37,616 | INFO     | exeerrordiag: 
[2026-03-25 22:55:03] 2026-03-26 02:54:37,616 | INFO     | exitcode: 0
[2026-03-25 22:55:03] 2026-03-26 02:54:37,616 | INFO     | exitmsg: OK
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | cpuconsumptiontime: 64011 s
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | nevents: 400
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | neventsw: 0
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | pid: 1464414
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | pgrp: 1464414
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | corecount: 12
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | event service: False
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | sizes: {0: 2280082, 1: 2280288, 11: 2280316, 5915: 2306969, 5916: 2315981, 5917: 2316037, 5919: 2316359}
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | --------------------------------------------------
[2026-03-25 22:55:03] 2026-03-26 02:54:37,617 | INFO     | 
[2026-03-25 22:55:03] 2026-03-26 02:54:37,618 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-25 22:55:03] 2026-03-26 02:54:37,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,639 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,639 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,639 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 22:55:03] 2026-03-26 02:54:37,641 | INFO     | job 7057025995 has completed (purged errors)
[2026-03-25 22:55:03] 2026-03-26 02:54:37,641 | INFO     | overall cleanup function is called
[2026-03-25 22:55:03] 2026-03-26 02:54:38,521 | INFO     | PID=1459442 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 22:55:03] 2026-03-26 02:54:38,521 | INFO     | .. there are 4 such processes running
[2026-03-25 22:55:03] 2026-03-26 02:54:38,649 | INFO     | --- collectZombieJob: --- 10, [1464414]
[2026-03-25 22:55:03] 2026-03-26 02:54:38,650 | INFO     | zombie collector waiting for pid 1464414
[2026-03-25 22:55:03] 2026-03-26 02:54:38,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 22:55:03] 2026-03-26 02:54:38,650 | INFO     | collected zombie processes
[2026-03-25 22:55:03] 2026-03-26 02:54:38,650 | INFO     | will attempt to kill all subprocesses of pid=1464414
[2026-03-25 22:55:03] 2026-03-26 02:54:38,843 | INFO     | process IDs to be killed: [1464414] (in reverse order)
[2026-03-25 22:55:03] 2026-03-26 02:54:38,894 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 22:55:03] 2026-03-26 02:54:38,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 22:55:03] 2026-03-26 02:54:38,900 | INFO     | did not find any defunct processes belonging to 1464414
[2026-03-25 22:55:03] 2026-03-26 02:54:38,905 | INFO     | did not find any defunct processes belonging to 1464414
[2026-03-25 22:55:03] 2026-03-26 02:54:38,906 | INFO     | ready for new job
[2026-03-25 22:55:03] 2026-03-26 02:54:38,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 22:55:03] 2026-03-26 02:54:38,908 | INFO     | **************************************
[2026-03-25 22:55:03] 2026-03-26 02:54:38,908 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 22:55:03] 2026-03-26 02:54:38,908 | INFO     | **************************************
[2026-03-25 22:55:03] 2026-03-26 02:54:38,908 | INFO     | 
[2026-03-25 22:55:03] 2026-03-26 02:54:38,911 | INFO     | architecture information:
[2026-03-25 22:55:03] 2026-03-26 02:54:38,911 | INFO     | executing command: cat /etc/os-release
[2026-03-25 22:55:03] 2026-03-26 02:54:38,922 | INFO     | cat /etc/os-release:
[2026-03-25 22:55:03] NAME="CentOS Linux"
[2026-03-25 22:55:03] VERSION="7 (Core)"
[2026-03-25 22:55:03] ID="centos"
[2026-03-25 22:55:03] ID_LIKE="rhel fedora"
[2026-03-25 22:55:03] VERSION_ID="7"
[2026-03-25 22:55:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 22:55:03] ANSI_COLOR="0;31"
[2026-03-25 22:55:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 22:55:03] HOME_URL="https://www.centos.org/"
[2026-03-25 22:55:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 22:55:03] 
[2026-03-25 22:55:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 22:55:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 22:55:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 22:55:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 22:55:03] 
[2026-03-25 22:55:03] 2026-03-26 02:54:38,922 | INFO     | **************************************
[2026-03-25 22:55:03] 2026-03-26 02:54:39,425 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-25 22:55:03] 2026-03-26 02:54:39,439 | INFO     | sufficient remaining disk space (395236605952 B)
[2026-03-25 22:55:03] 2026-03-26 02:54:39,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 22:55:03] 2026-03-26 02:54:39,440 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 22:55:03] 2026-03-26 02:54:39,440 | INFO     | update_server=False
[2026-03-25 22:55:03] 2026-03-26 02:54:39,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 22:55:03] 2026-03-26 02:54:39,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 22:55:03] 2026-03-26 02:54:39,440 | INFO     | aborting loop
[2026-03-25 22:55:03] 2026-03-26 02:54:39,441 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-25 22:55:03] 2026-03-26 02:54:39,441 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 22:55:03] 2026-03-26 02:54:39,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 22:55:03] 2026-03-26 02:54:39,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 22:55:03] 2026-03-26 02:54:40,397 | INFO     | all payload control threads have been joined
[2026-03-25 22:55:03] 2026-03-26 02:54:40,419 | INFO     | all data control threads have been joined
[2026-03-25 22:55:03] 2026-03-26 02:54:40,445 | INFO     | [job] retrieve thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:40,446 | INFO     | [job] job monitor thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:40,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 22:55:03] 2026-03-26 02:54:40,565 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:40,791 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:40,843 | INFO     | [payload] failed_post thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:40,907 | INFO     | [data] copytool_in thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:41,003 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:41,098 | INFO     | all job control threads have been joined
[2026-03-25 22:55:03] 2026-03-26 02:54:41,402 | INFO     | [payload] control thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:41,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 22:55:03] 2026-03-26 02:54:41,425 | INFO     | [data] control thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:41,525 | INFO     | [payload] validate_post thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:41,702 | INFO     | [job] validate thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:42,103 | INFO     | [job] control thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:42,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 22:55:03] 2026-03-26 02:54:42,500 | INFO     | [data] copytool_out thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:43,323 | INFO     | [job] queue monitor thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:45,425 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:49,708 | INFO     | job.realtimelogging is not enabled
[2026-03-25 22:55:03] 2026-03-26 02:54:50,713 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 22:55:03] 2026-03-26 02:54:56,195 | INFO     | [monitor] cgroup control has ended
[2026-03-25 22:55:03] 2026-03-26 02:54:57,879 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108522792768)>', '<ExcThread(monitor, started 140107998816000)>']
[2026-03-25 22:55:03] 2026-03-26 02:54:58,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 22:55:03] 2026-03-26 02:54:58,533 | INFO     | [monitor] control thread has ended
[2026-03-25 22:55:03] 2026-03-26 02:55:02,904 | INFO     | all workflow threads have been joined
[2026-03-25 22:55:03] 2026-03-26 02:55:02,905 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 22:55:03] 2026-03-26 02:55:02,905 | INFO     | traces error code: 0
[2026-03-25 22:55:03] 2026-03-26 02:55:02,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 22:55:03] 2026-03-26 02:55:03,009 [wrapper] ==== pilot stdout END ====
[2026-03-25 22:55:03] 2026-03-26 02:55:03,012 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 22:55:03] 2026-03-26 02:55:03,014 [wrapper] pilotpid: 1459442
[2026-03-25 22:55:03] 2026-03-26 02:55:03,016 [wrapper] Pilot exit status: 0
[2026-03-25 22:55:03] 2026-03-26 02:55:03,023 [wrapper] pandaids: 7057025995
[2026-03-25 22:55:03] 2026-03-26 02:55:03,054 [wrapper] cleanup supervisor_pilot 1503549 1459443
[2026-03-25 22:55:03] 2026-03-26 02:55:03,057 [wrapper] Test setup, not cleaning
[2026-03-25 22:55:03] 2026-03-26 02:55:03,059 [wrapper] apfmon messages muted
[2026-03-25 22:55:03] 2026-03-26 02:55:03,061 [wrapper] ==== wrapper stdout END ====
[2026-03-25 22:55:03] 2026-03-26 02:55:03,063 [wrapper] ==== wrapper stderr END ====
[2026-03-25 22:55:03]  *** Error codes and diagnostics ***
[2026-03-25 22:55:03]     "exeErrorCode": 0,
[2026-03-25 22:55:03]     "exeErrorDiag": "",
[2026-03-25 22:55:03]     "pilotErrorCode": 0,
[2026-03-25 22:55:03]     "pilotErrorDiag": "",
[2026-03-25 22:55:03]  *** Listing of results directory ***
[2026-03-25 22:55:03] total 408492
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc    585013 Mar 16 20:33 pilot3.tar.gz
[2026-03-25 22:55:03] -rwx------ 1 boinc boinc     36322 Mar 16 20:33 runpilot2-wrapper.sh
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc      5111 Mar 16 20:33 queuedata.json
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc       100 Mar 25 21:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 22:55:03] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 21:15 run_atlas
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc       105 Mar 25 21:15 job.xml
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc      7688 Mar 25 21:15 init_data.xml
[2026-03-25 22:55:03] -rw-r--r-- 2 boinc boinc 218260166 Mar 25 21:15 EVNT.49134019._000001.pool.root.1
[2026-03-25 22:55:03] -rw-r--r-- 2 boinc boinc     15845 Mar 25 21:15 start_atlas.sh
[2026-03-25 22:55:03] drwxrwx--x 2 boinc boinc      4096 Mar 25 21:15 shared
[2026-03-25 22:55:03] -rw-r--r-- 2 boinc boinc    597518 Mar 25 21:15 input.tar.gz
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc         0 Mar 25 21:15 boinc_lockfile
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc      2601 Mar 25 21:15 pandaJob.out
[2026-03-25 22:55:03] -rw------- 1 boinc boinc        50 Mar 25 21:15 setup.sh.local
[2026-03-25 22:55:03] -rw------- 1 boinc boinc   1012171 Mar 25 21:15 agis_schedconf.cvmfs.json
[2026-03-25 22:55:03] -rw------- 1 boinc boinc   1511579 Mar 25 21:15 agis_ddmendpoints.agis.ALL.json
[2026-03-25 22:55:03] -rw------- 1 boinc boinc       430 Mar 25 21:15 workernode_map.json
[2026-03-25 22:55:03] drwx------ 5 boinc boinc      4096 Mar 25 21:15 pilot3
[2026-03-25 22:55:03] -rw------- 1 boinc boinc 193513416 Mar 25 22:54 HITS.49176446._000021.pool.root.1
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc       529 Mar 25 22:54 boinc_task_state.xml
[2026-03-25 22:55:03] -rw------- 1 boinc boinc        95 Mar 25 22:54 pilot_heartbeat.json
[2026-03-25 22:55:03] -rw------- 1 boinc boinc      1023 Mar 25 22:54 memory_monitor_summary.json
[2026-03-25 22:55:03] -rw------- 1 boinc boinc    415954 Mar 25 22:54 log.49176446._000021.job.log.tgz.1
[2026-03-25 22:55:03] -rw------- 1 boinc boinc      6322 Mar 25 22:54 heartbeat.json
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc      8192 Mar 25 22:54 boinc_mmap_file
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc        27 Mar 25 22:54 wrapper_checkpoint.txt
[2026-03-25 22:55:03] -rw------- 1 boinc boinc      4628 Mar 25 22:55 pilotlog.txt
[2026-03-25 22:55:03] -rw------- 1 boinc boinc    868463 Mar 25 22:55 log.49176446._000021.job.log.1
[2026-03-25 22:55:03] -rw------- 1 boinc boinc       357 Mar 25 22:55 output.list
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc       620 Mar 25 22:55 runtime_log
[2026-03-25 22:55:03] -rw------- 1 boinc boinc   1300480 Mar 25 22:55 result.tar.gz
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc      9403 Mar 25 22:55 runtime_log.err
[2026-03-25 22:55:03] -rw------- 1 boinc boinc       650 Mar 25 22:55 hV8NDmrYXM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwFzLDmFEnXam.diag
[2026-03-25 22:55:03] -rw-r--r-- 1 boinc boinc     21144 Mar 25 22:55 stderr.txt
[2026-03-25 22:55:03] HITS file was successfully produced:
[2026-03-25 22:55:03] -rw------- 1 boinc boinc 193513416 Mar 25 22:54 shared/HITS.pool.root.1
[2026-03-25 22:55:03]  *** Contents of shared directory: ***
[2026-03-25 22:55:03] total 404008
[2026-03-25 22:55:03] -rw-r--r-- 2 boinc boinc 218260166 Mar 25 21:15 ATLAS.root_0
[2026-03-25 22:55:03] -rw-r--r-- 2 boinc boinc     15845 Mar 25 21:15 start_atlas.sh
[2026-03-25 22:55:03] -rw-r--r-- 2 boinc boinc    597518 Mar 25 21:15 input.tar.gz
[2026-03-25 22:55:03] -rw------- 1 boinc boinc 193513416 Mar 25 22:54 HITS.pool.root.1
[2026-03-25 22:55:03] -rw------- 1 boinc boinc   1300480 Mar 25 22:55 result.tar.gz
22:55:04 (1455046): run_atlas exited; CPU time 64166.406305
22:55:04 (1455046): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN