Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:36:38 (20741): wrapper (7.7.26015): starting
09:36:38 (20741): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 09:36:38] Arguments: --nthreads 8
[2026-03-25 09:36:38] Threads: 8
[2026-03-25 09:36:38] Checking for CVMFS
[2026-03-25 09:36:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 09:36:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 09:36:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 09:36:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 09:36:38] 2.11.0.0 7441 159646 91700 157676 1 188 2215855 4096000 3335 130560 1 12902945 99.646 9826007 361 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 09:36:38] CVMFS is ok
[2026-03-25 09:36:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 09:36:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 09:36:38] Further information can be found at the LHC@home message board.
[2026-03-25 09:36:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 09:36:38] Checking for apptainer binary...
[2026-03-25 09:36:38] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 09:36:38] apptainer is not installed, using version from CVMFS
[2026-03-25 09:36:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 09:36:38] WARNING: Environment variable TMPDIR already has value [/tmp/job_11392714/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node025
[2026-03-25 09:36:38] apptainer works
[2026-03-25 09:36:38] Set ATHENA_PROC_NUMBER=8
[2026-03-25 09:36:38] Set ATHENA_CORE_NUMBER=8
[2026-03-25 09:36:38] Starting ATLAS job with PandaID=7056986154
[2026-03-25 09:36:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11392714/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 11:39:02]  *** The last 200 lines of the pilot log: ***
[2026-03-25 11:39:02] 2026-03-25 10:38:13,967 | INFO     | total number of processed events: 400 (read)
[2026-03-25 11:39:02] 2026-03-25 10:38:13,984 | INFO     | using path: /tmp/job_11392714/atlas/pilot/slots/0/PanDA_Pilot-7056986154/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 11:39:02] 2026-03-25 10:38:13,984 | INFO     | extracted standard info from prmon json
[2026-03-25 11:39:02] 2026-03-25 10:38:13,984 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 11:39:02] 2026-03-25 10:38:13,984 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 11:39:02] 2026-03-25 10:38:13,984 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 11:39:02] 2026-03-25 10:38:13,984 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 11:39:02] 2026-03-25 10:38:13,985 | INFO     | fitting pss+swap vs Time
[2026-03-25 11:39:02] 2026-03-25 10:38:13,986 | INFO     | sum of square deviations: 535786790.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,986 | INFO     | sum of deviations: 6027990018.499999
[2026-03-25 11:39:02] 2026-03-25 10:38:13,986 | INFO     | mean x: 1774431451.5
[2026-03-25 11:39:02] 2026-03-25 10:38:13,986 | INFO     | mean y: 2491020.5083333333
[2026-03-25 11:39:02] 2026-03-25 10:38:13,986 | INFO     | intersect: -19961149886.268154
[2026-03-25 11:39:02] 2026-03-25 10:38:13,986 | INFO     | chi2: 1.9290588686889256
[2026-03-25 11:39:02] 2026-03-25 10:38:13,986 | INFO     | sum of square deviations: 471562330.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | sum of deviations: 13497946776.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | mean x: 1774431299.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | mean y: 2508123.7739130436
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | intersect: -50788612599.48348
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | chi2: 1.1718924524897412
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | current chi2=1.1718924524897412 (change=39.250560389263214 %)
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | sum of square deviations: 412686807.5
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | sum of deviations: 12899375858.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | mean x: 1774431146.5
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | mean y: 2506572.4
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | intersect: -55460992325.236465
[2026-03-25 11:39:02] 2026-03-25 10:38:13,987 | INFO     | chi2: 1.1733418346604647
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | current chi2=1.1733418346604647 (change=-0.12367876997963971 %)
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | right removable region: 109
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | sum of square deviations: 471562330.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | sum of deviations: -8421874720.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | mean x: 1774431604.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | mean y: 2524581.304347826
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | intersect: 31693013234.409126
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | chi2: 0.7882439962687323
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | current chi2=0.7882439962687323 (change=59.1384167138218 %)
[2026-03-25 11:39:02] 2026-03-25 10:38:13,988 | INFO     | sum of square deviations: 412686807.5
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | sum of deviations: -8576143537.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | mean x: 1774431756.5
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | mean y: 2524961.5090909093
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | intersect: 36877416922.660614
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | chi2: 0.7876580315595502
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | current chi2=0.7876580315595502 (change=0.07433798569426485 %)
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | left removable region: 20
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | sum of square deviations: 218571540.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | sum of deviations: -854249795.0000001
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | mean x: 1774431726.0
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | mean y: 2544611.741573034
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | intersect: 6937610074.413413
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | chi2: 0.0032517813413775807
[2026-03-25 11:39:02] 2026-03-25 10:38:13,989 | INFO     | current memory leak: -3.91 B/s (using 89 data points, chi2=0.00)
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | could have reported an average CPU frequency of 2521 MHz (8 samples)
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | ..............................
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | . Timing measurements:
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | . get job = 0 s
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | . initial setup = 2 s
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | . payload setup = 3 s
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | . stage-in = 0 s
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | . payload execution = 7268 s
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | . stage-out = 0 s
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | . log creation = 0 s
[2026-03-25 11:39:02] 2026-03-25 10:38:13,990 | INFO     | ..............................
[2026-03-25 11:39:02] 2026-03-25 10:38:14,117 | INFO     | 
[2026-03-25 11:39:02] 2026-03-25 10:38:14,117 | INFO     | job summary report
[2026-03-25 11:39:02] 2026-03-25 10:38:14,117 | INFO     | --------------------------------------------------
[2026-03-25 11:39:02] 2026-03-25 10:38:14,117 | INFO     | PanDA job id: 7056986154
[2026-03-25 11:39:02] 2026-03-25 10:38:14,117 | INFO     | task id: 49182650
[2026-03-25 11:39:02] 2026-03-25 10:38:14,117 | INFO     | errors: (none)
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | pilot state: finished 
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | transexitcode: 0
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | exeerrorcode: 0
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | exeerrordiag: 
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | exitcode: 0
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | exitmsg: OK
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | cpuconsumptiontime: 54073 s
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | nevents: 400
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | neventsw: 0
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | pid: 31366
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | pgrp: 31366
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | corecount: 8
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | event service: False
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | sizes: {0: 2279962, 1: 2280477, 11: 2280477, 7275: 2308018, 7277: 2317102, 7278: 2317240}
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | --------------------------------------------------
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | 
[2026-03-25 11:39:02] 2026-03-25 10:38:14,118 | INFO     | executing command: ls -lF /tmp/job_11392714/atlas/pilot/slots/0
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | job 7056986154 has completed (purged errors)
[2026-03-25 11:39:02] 2026-03-25 10:38:14,129 | INFO     | overall cleanup function is called
[2026-03-25 11:39:02] 2026-03-25 10:38:15,135 | INFO     | --- collectZombieJob: --- 10, [31366]
[2026-03-25 11:39:02] 2026-03-25 10:38:15,135 | INFO     | zombie collector waiting for pid 31366
[2026-03-25 11:39:02] 2026-03-25 10:38:15,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 11:39:02] 2026-03-25 10:38:15,135 | INFO     | collected zombie processes
[2026-03-25 11:39:02] 2026-03-25 10:38:15,135 | INFO     | will attempt to kill all subprocesses of pid=31366
[2026-03-25 11:39:02] 2026-03-25 10:38:15,247 | INFO     | process IDs to be killed: [31366] (in reverse order)
[2026-03-25 11:39:02] 2026-03-25 10:38:15,289 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 11:39:02] 2026-03-25 10:38:15,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 11:39:02] 2026-03-25 10:38:15,293 | INFO     | did not find any defunct processes belonging to 31366
[2026-03-25 11:39:02] 2026-03-25 10:38:15,296 | INFO     | did not find any defunct processes belonging to 31366
[2026-03-25 11:39:02] 2026-03-25 10:38:15,296 | INFO     | ready for new job
[2026-03-25 11:39:02] 2026-03-25 10:38:15,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 11:39:02] 2026-03-25 10:38:15,297 | INFO     | **************************************
[2026-03-25 11:39:02] 2026-03-25 10:38:15,297 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 11:39:02] 2026-03-25 10:38:15,297 | INFO     | **************************************
[2026-03-25 11:39:02] 2026-03-25 10:38:15,297 | INFO     | 
[2026-03-25 11:39:02] 2026-03-25 10:38:15,311 | INFO     | architecture information:
[2026-03-25 11:39:02] 2026-03-25 10:38:15,312 | INFO     | executing command: cat /etc/os-release
[2026-03-25 11:39:02] 2026-03-25 10:38:15,318 | INFO     | cat /etc/os-release:
[2026-03-25 11:39:02] NAME="CentOS Linux"
[2026-03-25 11:39:02] VERSION="7 (Core)"
[2026-03-25 11:39:02] ID="centos"
[2026-03-25 11:39:02] ID_LIKE="rhel fedora"
[2026-03-25 11:39:02] VERSION_ID="7"
[2026-03-25 11:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 11:39:02] ANSI_COLOR="0;31"
[2026-03-25 11:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 11:39:02] HOME_URL="https://www.centos.org/"
[2026-03-25 11:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 11:39:02] 
[2026-03-25 11:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 11:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 11:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 11:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 11:39:02] 
[2026-03-25 11:39:02] 2026-03-25 10:38:15,318 | INFO     | **************************************
[2026-03-25 11:39:02] 2026-03-25 10:38:15,821 | INFO     | executing command: df -mP /tmp/job_11392714/atlas/pilot/slots/0
[2026-03-25 11:39:02] 2026-03-25 10:38:15,826 | INFO     | sufficient remaining disk space (208906747904 B)
[2026-03-25 11:39:02] 2026-03-25 10:38:15,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 11:39:02] 2026-03-25 10:38:15,827 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 11:39:02] 2026-03-25 10:38:15,827 | INFO     | update_server=False
[2026-03-25 11:39:02] 2026-03-25 10:38:15,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 11:39:02] 2026-03-25 10:38:15,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:39:02] 2026-03-25 10:38:15,984 | INFO     | all job control threads have been joined
[2026-03-25 11:39:02] 2026-03-25 10:38:16,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 11:39:02] 2026-03-25 10:38:16,278 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 11:39:02] 2026-03-25 10:38:16,278 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 11:39:02] 2026-03-25 10:38:16,278 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:39:02] 2026-03-25 10:38:16,278 | INFO     | will abort loop
[2026-03-25 11:39:02] 2026-03-25 10:38:16,560 | INFO     | all data control threads have been joined
[2026-03-25 11:39:02] 2026-03-25 10:38:16,612 | INFO     | all payload control threads have been joined
[2026-03-25 11:39:02] 2026-03-25 10:38:16,832 | INFO     | [job] queue monitor thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:16,832 | INFO     | [job] retrieve thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:16,947 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:16,964 | INFO     | [data] copytool_in thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:16,989 | INFO     | [job] control thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:17,199 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:17,204 | INFO     | [payload] failed_post thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:17,283 | INFO     | [job] job monitor thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:17,304 | INFO     | job.realtimelogging is not enabled
[2026-03-25 11:39:02] 2026-03-25 10:38:17,547 | INFO     | [payload] validate_post thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:17,565 | INFO     | [data] control thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:17,617 | INFO     | [payload] control thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:18,016 | INFO     | [data] copytool_out thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:18,138 | INFO     | [job] validate thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:18,288 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:18,309 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:19,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 11:39:02] 2026-03-25 10:38:23,060 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 11:39:02] 2026-03-25 10:38:46,979 | INFO     | PID=25579 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 11:39:02] 2026-03-25 10:38:46,979 | INFO     | .. there are 7 such processes running
[2026-03-25 11:39:02] 2026-03-25 10:38:46,980 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 11:39:02] 2026-03-25 10:38:46,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 11:39:02] 2026-03-25 10:38:46,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 11:39:02] 2026-03-25 10:38:57,049 | INFO     | [monitor] cgroup control has ended
[2026-03-25 11:39:02] 2026-03-25 10:38:57,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067393280)>']
[2026-03-25 11:39:02] 2026-03-25 10:38:58,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 11:39:02] 2026-03-25 10:38:58,034 | INFO     | [monitor] control thread has ended
[2026-03-25 11:39:02] 2026-03-25 10:39:02,404 | INFO     | all workflow threads have been joined
[2026-03-25 11:39:02] 2026-03-25 10:39:02,404 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 11:39:02] 2026-03-25 10:39:02,404 | INFO     | traces error code: 0
[2026-03-25 11:39:02] 2026-03-25 10:39:02,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 11:39:02] 2026-03-25 10:39:02,456 [wrapper] ==== pilot stdout END ====
[2026-03-25 11:39:02] 2026-03-25 10:39:02,457 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 11:39:02] 2026-03-25 10:39:02,459 [wrapper] pilotpid: 25579
[2026-03-25 11:39:02] 2026-03-25 10:39:02,460 [wrapper] Pilot exit status: 0
[2026-03-25 11:39:02] 2026-03-25 10:39:02,463 [wrapper] pandaids: 7056986154
[2026-03-25 11:39:02] 2026-03-25 10:39:02,487 [wrapper] cleanup supervisor_pilot 15637 25580
[2026-03-25 11:39:02] 2026-03-25 10:39:02,488 [wrapper] Test setup, not cleaning
[2026-03-25 11:39:02] 2026-03-25 10:39:02,489 [wrapper] apfmon messages muted
[2026-03-25 11:39:02] 2026-03-25 10:39:02,491 [wrapper] ==== wrapper stdout END ====
[2026-03-25 11:39:02] 2026-03-25 10:39:02,492 [wrapper] ==== wrapper stderr END ====
[2026-03-25 11:39:02]  *** Error codes and diagnostics ***
[2026-03-25 11:39:02]     "exeErrorCode": 0,
[2026-03-25 11:39:02]     "exeErrorDiag": "",
[2026-03-25 11:39:02]     "pilotErrorCode": 0,
[2026-03-25 11:39:02]     "pilotErrorDiag": "",
[2026-03-25 11:39:02]  *** Listing of results directory ***
[2026-03-25 11:39:02] total 487408
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user    585013 Mar 16 22:25 pilot3.tar.gz
[2026-03-25 11:39:02] -rwx------ 1 mf493845 unix-user     36322 Mar 16 22:29 runpilot2-wrapper.sh
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user      5111 Mar 16 22:30 queuedata.json
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user       100 Mar 25 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 11:39:02] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 08:34 run_atlas
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user       105 Mar 25 08:34 job.xml
[2026-03-25 11:39:02] -rw-r--r-- 2 mf493845 unix-user 242918828 Mar 25 09:36 EVNT.49137741._000009.pool.root.1
[2026-03-25 11:39:02] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:36 start_atlas.sh
[2026-03-25 11:39:02] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 09:36 shared
[2026-03-25 11:39:02] -rw-r--r-- 2 mf493845 unix-user    597549 Mar 25 09:36 input.tar.gz
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user      6390 Mar 25 09:36 init_data.xml
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user         0 Mar 25 09:36 boinc_setup_complete
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user      8192 Mar 25 09:36 boinc_mmap_file
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user         0 Mar 25 09:36 boinc_lockfile
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user      2632 Mar 25 09:36 pandaJob.out
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user   1010820 Mar 25 09:36 agis_schedconf.cvmfs.json
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user   1511579 Mar 25 09:36 agis_ddmendpoints.agis.ALL.json
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user       420 Mar 25 09:36 workernode_map.json
[2026-03-25 11:39:02] drwx------ 5 mf493845 unix-user       440 Mar 25 09:36 pilot3
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user 249403660 Mar 25 11:37 HITS.49182650._000209.pool.root.1
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user      1020 Mar 25 11:38 memory_monitor_summary.json
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user    358286 Mar 25 11:38 log.49182650._000209.job.log.tgz.1
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user      6310 Mar 25 11:38 heartbeat.json
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user        95 Mar 25 11:38 pilot_heartbeat.json
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user      5089 Mar 25 11:39 pilotlog.txt
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user   1077120 Mar 25 11:39 log.49182650._000209.job.log.1
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user       357 Mar 25 11:39 output.list
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user       620 Mar 25 11:39 runtime_log
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user   1454080 Mar 25 11:39 result.tar.gz
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user      9219 Mar 25 11:39 runtime_log.err
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user       644 Mar 25 11:39 iBDMDmHgUM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmP9vLDm9ir5wn.diag
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user     21466 Mar 25 11:39 stderr.txt
[2026-03-25 11:39:02] HITS file was successfully produced:
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user 249403660 Mar 25 11:37 shared/HITS.pool.root.1
[2026-03-25 11:39:02]  *** Contents of shared directory: ***
[2026-03-25 11:39:02] total 482808
[2026-03-25 11:39:02] -rw-r--r-- 2 mf493845 unix-user 242918828 Mar 25 09:36 ATLAS.root_0
[2026-03-25 11:39:02] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:36 start_atlas.sh
[2026-03-25 11:39:02] -rw-r--r-- 2 mf493845 unix-user    597549 Mar 25 09:36 input.tar.gz
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user 249403660 Mar 25 11:37 HITS.pool.root.1
[2026-03-25 11:39:02] -rw------- 1 mf493845 unix-user   1454080 Mar 25 11:39 result.tar.gz
11:39:03 (20741): run_atlas exited; CPU time 54186.500848
11:39:03 (20741): called boinc_finish(0)

</stderr_txt>
]]>

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