Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:36:10 (26029): wrapper (7.7.26015): starting
09:36:10 (26029): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 09:36:10] Arguments: --nthreads 8
[2026-03-25 09:36:10] Threads: 8
[2026-03-25 09:36:10] Checking for CVMFS
[2026-03-25 09:36:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 09:36:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 09:36:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 09:36:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 09:36:11] 2.11.0.0 6383 159842 88000 157676 1 187 2203343 4096000 2211 130560 1 16038330 99.760 8329438 319 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 09:36:11] CVMFS is ok
[2026-03-25 09:36:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 09:36:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 09:36:11] Further information can be found at the LHC@home message board.
[2026-03-25 09:36:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 09:36:11] Checking for apptainer binary...
[2026-03-25 09:36:11] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 09:36:11] apptainer is not installed, using version from CVMFS
[2026-03-25 09:36:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 09:36:11] WARNING: Environment variable TMPDIR already has value [/tmp/job_11392728/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node029
[2026-03-25 09:36:11] apptainer works
[2026-03-25 09:36:11] Set ATHENA_PROC_NUMBER=8
[2026-03-25 09:36:11] Set ATHENA_CORE_NUMBER=8
[2026-03-25 09:36:11] Starting ATLAS job with PandaID=7057001378
[2026-03-25 09:36:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11392728/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 11:31:34]  *** The last 200 lines of the pilot log: ***
[2026-03-25 11:31:34] 2026-03-25 10:31:00,666 | INFO     | job 7057001378 has state=finished
[2026-03-25 11:31:34] 2026-03-25 10:31:00,666 | INFO     | preparing for final server update for job 7057001378 in state='finished'
[2026-03-25 11:31:34] 2026-03-25 10:31:00,666 | INFO     | reading metadata from: /tmp/job_11392728/atlas/pilot/slots/0/PanDA_Pilot-7057001378/jobReport.json
[2026-03-25 11:31:34] 2026-03-25 10:31:00,667 | INFO     | added worker_node to metadata from /tmp/job_11392728/atlas/pilot/slots/0/workernode_map.json
[2026-03-25 11:31:34] 2026-03-25 10:31:00,667 | INFO     | this job has now completed (state=finished)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,667 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,667 | INFO     | log transfer has been attempted: DONE
[2026-03-25 11:31:34] 2026-03-25 10:31:00,668 | INFO     | job 7057001378 has finished - writing final server update
[2026-03-25 11:31:34] 2026-03-25 10:31:00,668 | INFO     | total number of processed events: 400 (read)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,685 | INFO     | using path: /tmp/job_11392728/atlas/pilot/slots/0/PanDA_Pilot-7057001378/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,685 | INFO     | extracted standard info from prmon json
[2026-03-25 11:31:34] 2026-03-25 10:31:00,685 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 11:31:34] 2026-03-25 10:31:00,685 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 11:31:34] 2026-03-25 10:31:00,686 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 11:31:34] 2026-03-25 10:31:00,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 11:31:34] 2026-03-25 10:31:00,687 | INFO     | fitting pss+swap vs Time
[2026-03-25 11:31:34] 2026-03-25 10:31:00,687 | INFO     | sum of square deviations: 447383272.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,687 | INFO     | sum of deviations: 12774594135.999998
[2026-03-25 11:31:34] 2026-03-25 10:31:00,687 | INFO     | mean x: 1774431210.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,687 | INFO     | mean y: 2503195.7345132744
[2026-03-25 11:31:34] 2026-03-25 10:31:00,687 | INFO     | intersect: -50664653912.45835
[2026-03-25 11:31:34] 2026-03-25 10:31:00,687 | INFO     | chi2: 1.1182496611331185
[2026-03-25 11:31:34] 2026-03-25 10:31:00,688 | INFO     | sum of square deviations: 390582207.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,688 | INFO     | sum of deviations: 12043447678.500002
[2026-03-25 11:31:34] 2026-03-25 10:31:00,688 | INFO     | mean x: 1774431057.5
[2026-03-25 11:31:34] 2026-03-25 10:31:00,688 | INFO     | mean y: 2501232.435185185
[2026-03-25 11:31:34] 2026-03-25 10:31:00,688 | INFO     | intersect: -54711377733.655754
[2026-03-25 11:31:34] 2026-03-25 10:31:00,688 | INFO     | chi2: 1.1198631906371872
[2026-03-25 11:31:34] 2026-03-25 10:31:00,688 | INFO     | current chi2=1.1198631906371872 (change=-0.14429063206097414 %)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,688 | INFO     | right removable region: 107
[2026-03-25 11:31:34] 2026-03-25 10:31:00,688 | INFO     | sum of square deviations: 390582207.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | sum of deviations: -433707926.0000001
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | mean x: 1774431362.5
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | mean y: 2537826.7407407407
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | intersect: 1972891141.0155752
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | chi2: 0.004965560793438775
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | current chi2=0.004965560793438775 (change=99.55595239900121 %)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | sum of square deviations: 338804492.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | sum of deviations: -767937845.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | mean x: 1774431515.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | mean y: 2538804.631067961
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | intersect: 4024484044.1563606
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | chi2: 0.004405827952361643
[2026-03-25 11:31:34] 2026-03-25 10:31:00,689 | INFO     | current chi2=0.004405827952361643 (change=11.272298625700701 %)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | left removable region: 20
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | sum of square deviations: 204163828.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | sum of deviations: -574859791.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | mean x: 1774431637.0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | mean y: 2537127.6666666665
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | intersect: 4998766920.093991
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | chi2: 0.004123699154337374
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | current memory leak: -2.82 B/s (using 87 data points, chi2=0.00)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | could have reported an average CPU frequency of 2411 MHz (7 samples)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | ..............................
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | . Timing measurements:
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | . get job = 0 s
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | . initial setup = 2 s
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | . payload setup = 3 s
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | . stage-in = 0 s
[2026-03-25 11:31:34] 2026-03-25 10:31:00,690 | INFO     | . payload execution = 6859 s
[2026-03-25 11:31:34] 2026-03-25 10:31:00,691 | INFO     | . stage-out = 0 s
[2026-03-25 11:31:34] 2026-03-25 10:31:00,691 | INFO     | . log creation = 0 s
[2026-03-25 11:31:34] 2026-03-25 10:31:00,691 | INFO     | ..............................
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | 
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | job summary report
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | --------------------------------------------------
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | PanDA job id: 7057001378
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | task id: 49176688
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | errors: (none)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | pilot state: finished 
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | transexitcode: 0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | exeerrorcode: 0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | exeerrordiag: 
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | exitcode: 0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | exitmsg: OK
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | cpuconsumptiontime: 50709 s
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | nevents: 400
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | neventsw: 0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | pid: 4386
[2026-03-25 11:31:34] 2026-03-25 10:31:00,737 | INFO     | pgrp: 4386
[2026-03-25 11:31:34] 2026-03-25 10:31:00,738 | INFO     | corecount: 8
[2026-03-25 11:31:34] 2026-03-25 10:31:00,738 | INFO     | event service: False
[2026-03-25 11:31:34] 2026-03-25 10:31:00,738 | INFO     | sizes: {0: 2280437, 11: 2280437, 6865: 2307809, 6866: 2307808, 6867: 2316892, 6870: 2316948, 6871: 2317270}
[2026-03-25 11:31:34] 2026-03-25 10:31:00,738 | INFO     | --------------------------------------------------
[2026-03-25 11:31:34] 2026-03-25 10:31:00,738 | INFO     | 
[2026-03-25 11:31:34] 2026-03-25 10:31:00,738 | INFO     | executing command: ls -lF /tmp/job_11392728/atlas/pilot/slots/0
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,748 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,749 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 11:31:34] 2026-03-25 10:31:00,749 | INFO     | job 7057001378 has completed (purged errors)
[2026-03-25 11:31:34] 2026-03-25 10:31:00,749 | INFO     | overall cleanup function is called
[2026-03-25 11:31:34] 2026-03-25 10:31:01,755 | INFO     | --- collectZombieJob: --- 10, [4386]
[2026-03-25 11:31:34] 2026-03-25 10:31:01,755 | INFO     | zombie collector waiting for pid 4386
[2026-03-25 11:31:34] 2026-03-25 10:31:01,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 11:31:34] 2026-03-25 10:31:01,755 | INFO     | collected zombie processes
[2026-03-25 11:31:34] 2026-03-25 10:31:01,755 | INFO     | will attempt to kill all subprocesses of pid=4386
[2026-03-25 11:31:34] 2026-03-25 10:31:01,858 | INFO     | process IDs to be killed: [4386] (in reverse order)
[2026-03-25 11:31:34] 2026-03-25 10:31:01,897 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 11:31:34] 2026-03-25 10:31:01,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 11:31:34] 2026-03-25 10:31:01,901 | INFO     | did not find any defunct processes belonging to 4386
[2026-03-25 11:31:34] 2026-03-25 10:31:01,904 | INFO     | did not find any defunct processes belonging to 4386
[2026-03-25 11:31:34] 2026-03-25 10:31:01,904 | INFO     | ready for new job
[2026-03-25 11:31:34] 2026-03-25 10:31:01,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 11:31:34] 2026-03-25 10:31:01,905 | INFO     | **************************************
[2026-03-25 11:31:34] 2026-03-25 10:31:01,905 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 11:31:34] 2026-03-25 10:31:01,905 | INFO     | **************************************
[2026-03-25 11:31:34] 2026-03-25 10:31:01,905 | INFO     | 
[2026-03-25 11:31:34] 2026-03-25 10:31:01,920 | INFO     | architecture information:
[2026-03-25 11:31:34] 2026-03-25 10:31:01,920 | INFO     | executing command: cat /etc/os-release
[2026-03-25 11:31:34] 2026-03-25 10:31:01,927 | INFO     | cat /etc/os-release:
[2026-03-25 11:31:34] NAME="CentOS Linux"
[2026-03-25 11:31:34] VERSION="7 (Core)"
[2026-03-25 11:31:34] ID="centos"
[2026-03-25 11:31:34] ID_LIKE="rhel fedora"
[2026-03-25 11:31:34] VERSION_ID="7"
[2026-03-25 11:31:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 11:31:34] ANSI_COLOR="0;31"
[2026-03-25 11:31:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 11:31:34] HOME_URL="https://www.centos.org/"
[2026-03-25 11:31:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 11:31:34] 
[2026-03-25 11:31:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 11:31:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 11:31:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 11:31:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 11:31:34] 
[2026-03-25 11:31:34] 2026-03-25 10:31:01,927 | INFO     | **************************************
[2026-03-25 11:31:34] 2026-03-25 10:31:02,429 | INFO     | executing command: df -mP /tmp/job_11392728/atlas/pilot/slots/0
[2026-03-25 11:31:34] 2026-03-25 10:31:02,435 | INFO     | sufficient remaining disk space (224954155008 B)
[2026-03-25 11:31:34] 2026-03-25 10:31:02,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 11:31:34] 2026-03-25 10:31:02,435 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 11:31:34] 2026-03-25 10:31:02,436 | INFO     | update_server=False
[2026-03-25 11:31:34] 2026-03-25 10:31:02,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 11:31:34] 2026-03-25 10:31:02,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:31:34] 2026-03-25 10:31:02,436 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 11:31:34] 2026-03-25 10:31:02,766 | INFO     | all data control threads have been joined
[2026-03-25 11:31:34] 2026-03-25 10:31:02,825 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 11:31:34] 2026-03-25 10:31:02,825 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 11:31:34] 2026-03-25 10:31:02,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:31:34] 2026-03-25 10:31:02,825 | INFO     | will abort loop
[2026-03-25 11:31:34] 2026-03-25 10:31:03,128 | INFO     | all payload control threads have been joined
[2026-03-25 11:31:34] 2026-03-25 10:31:03,441 | INFO     | [job] retrieve thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:03,441 | INFO     | [job] queue monitor thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:03,523 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:03,772 | INFO     | [data] control thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:03,831 | INFO     | [job] job monitor thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:03,940 | INFO     | all job control threads have been joined
[2026-03-25 11:31:34] 2026-03-25 10:31:03,958 | INFO     | [payload] validate_post thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:04,086 | INFO     | [data] copytool_in thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:04,133 | INFO     | [payload] control thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:04,282 | INFO     | [job] validate thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:04,287 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:04,314 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:04,330 | INFO     | [payload] failed_post thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:04,441 | INFO     | [data] copytool_out thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:04,907 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:04,945 | INFO     | [job] control thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:05,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 11:31:34] 2026-03-25 10:31:09,021 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 11:31:34] 2026-03-25 10:31:28,982 | INFO     | [monitor] cgroup control has ended
[2026-03-25 11:31:34] 2026-03-25 10:31:29,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067393280)>']
[2026-03-25 11:31:34] 2026-03-25 10:31:32,932 | INFO     | PID=30847 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 11:31:34] 2026-03-25 10:31:32,932 | INFO     | .. there are 5 such processes running
[2026-03-25 11:31:34] 2026-03-25 10:31:32,932 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 11:31:34] 2026-03-25 10:31:32,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 11:31:34] 2026-03-25 10:31:32,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 11:31:34] 2026-03-25 10:31:32,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 11:31:34] 2026-03-25 10:31:32,933 | INFO     | [monitor] control thread has ended
[2026-03-25 11:31:34] 2026-03-25 10:31:34,793 | INFO     | all workflow threads have been joined
[2026-03-25 11:31:34] 2026-03-25 10:31:34,793 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 11:31:34] 2026-03-25 10:31:34,794 | INFO     | traces error code: 0
[2026-03-25 11:31:34] 2026-03-25 10:31:34,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 11:31:34] 2026-03-25 10:31:34,847 [wrapper] ==== pilot stdout END ====
[2026-03-25 11:31:34] 2026-03-25 10:31:34,848 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 11:31:34] 2026-03-25 10:31:34,850 [wrapper] pilotpid: 30847
[2026-03-25 11:31:34] 2026-03-25 10:31:34,851 [wrapper] Pilot exit status: 0
[2026-03-25 11:31:34] 2026-03-25 10:31:34,855 [wrapper] pandaids: 7057001378
[2026-03-25 11:31:34] 2026-03-25 10:31:34,879 [wrapper] cleanup supervisor_pilot  4397 30848
[2026-03-25 11:31:34] 2026-03-25 10:31:34,880 [wrapper] Test setup, not cleaning
[2026-03-25 11:31:34] 2026-03-25 10:31:34,881 [wrapper] apfmon messages muted
[2026-03-25 11:31:34] 2026-03-25 10:31:34,882 [wrapper] ==== wrapper stdout END ====
[2026-03-25 11:31:34] 2026-03-25 10:31:34,883 [wrapper] ==== wrapper stderr END ====
[2026-03-25 11:31:34]  *** Error codes and diagnostics ***
[2026-03-25 11:31:34]     "exeErrorCode": 0,
[2026-03-25 11:31:34]     "exeErrorDiag": "",
[2026-03-25 11:31:34]     "pilotErrorCode": 0,
[2026-03-25 11:31:34]     "pilotErrorDiag": "",
[2026-03-25 11:31:34]  *** Listing of results directory ***
[2026-03-25 11:31:34] total 464412
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user    585013 Mar 17 01:33 pilot3.tar.gz
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user      5111 Mar 17 01:33 queuedata.json
[2026-03-25 11:31:34] -rwx------ 1 mf493845 unix-user     36322 Mar 17 01:34 runpilot2-wrapper.sh
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user       100 Mar 25 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 11:31:34] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 08:34 run_atlas
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user       105 Mar 25 08:34 job.xml
[2026-03-25 11:31:34] -rw-r--r-- 2 mf493845 unix-user 240493779 Mar 25 09:36 EVNT.49134869._000010.pool.root.1
[2026-03-25 11:31:34] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:36 start_atlas.sh
[2026-03-25 11:31:34] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 09:36 shared
[2026-03-25 11:31:34] -rw-r--r-- 2 mf493845 unix-user    597541 Mar 25 09:36 input.tar.gz
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user      6390 Mar 25 09:36 init_data.xml
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user         0 Mar 25 09:36 boinc_setup_complete
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user      8192 Mar 25 09:36 boinc_mmap_file
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user         0 Mar 25 09:36 boinc_lockfile
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user      2622 Mar 25 09:36 pandaJob.out
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user   1010820 Mar 25 09:36 agis_schedconf.cvmfs.json
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user   1511579 Mar 25 09:36 agis_ddmendpoints.agis.ALL.json
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user       420 Mar 25 09:36 workernode_map.json
[2026-03-25 11:31:34] drwx------ 5 mf493845 unix-user       440 Mar 25 09:36 pilot3
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user 228424600 Mar 25 11:30 HITS.49176688._000229.pool.root.1
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user        95 Mar 25 11:30 pilot_heartbeat.json
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user      1013 Mar 25 11:30 memory_monitor_summary.json
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user    347239 Mar 25 11:30 log.49176688._000229.job.log.tgz.1
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user      6296 Mar 25 11:31 heartbeat.json
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user      5017 Mar 25 11:31 pilotlog.txt
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user   1015735 Mar 25 11:31 log.49176688._000229.job.log.1
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user       357 Mar 25 11:31 output.list
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user       620 Mar 25 11:31 runtime_log
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user   1382400 Mar 25 11:31 result.tar.gz
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user      9219 Mar 25 11:31 runtime_log.err
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user       643 Mar 25 11:31 BLgMDm6YXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmlDwLDmpP79Dm.diag
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user     21740 Mar 25 11:31 stderr.txt
[2026-03-25 11:31:34] HITS file was successfully produced:
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user 228424600 Mar 25 11:30 shared/HITS.pool.root.1
[2026-03-25 11:31:34]  *** Contents of shared directory: ***
[2026-03-25 11:31:34] total 459884
[2026-03-25 11:31:34] -rw-r--r-- 2 mf493845 unix-user 240493779 Mar 25 09:36 ATLAS.root_0
[2026-03-25 11:31:34] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:36 start_atlas.sh
[2026-03-25 11:31:34] -rw-r--r-- 2 mf493845 unix-user    597541 Mar 25 09:36 input.tar.gz
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user 228424600 Mar 25 11:30 HITS.pool.root.1
[2026-03-25 11:31:34] -rw------- 1 mf493845 unix-user   1382400 Mar 25 11:31 result.tar.gz
11:31:36 (26029): run_atlas exited; CPU time 50813.844536
11:31:36 (26029): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN