Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:15:24 (1446943): wrapper (7.7.26015): starting
07:15:24 (1446943): wrapper: running run_atlas (--nthreads 4)
[2026-03-27 07:15:24] Arguments: --nthreads 4
[2026-03-27 07:15:24] Threads: 4
[2026-03-27 07:15:24] Checking for CVMFS
[2026-03-27 07:15:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-27 07:15:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-27 07:15:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-27 07:15:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-27 07:15:25] 2.9.2.0 833317 6487 99468 157747 0 50 31726143 36864001 0 130560 0 1969046 99.979 223210 6289 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-27 07:15:25] CVMFS is ok
[2026-03-27 07:15:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-27 07:15:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-27 07:15:25] Further information can be found at the LHC@home message board.
[2026-03-27 07:15:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-27 07:15:25] Checking for apptainer binary...
[2026-03-27 07:15:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-27 07:15:25] Running /usr/bin/apptainer --version
[2026-03-27 07:15:25] apptainer version 1.4.1-1.1
[2026-03-27 07:15:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-27 07:15:25] thA314
[2026-03-27 07:15:25] apptainer works
[2026-03-27 07:15:25] Set ATHENA_PROC_NUMBER=4
[2026-03-27 07:15:25] Set ATHENA_CORE_NUMBER=4
[2026-03-27 07:15:25] Starting ATLAS job with PandaID=7056999876
[2026-03-27 07:15:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-27 10:19:12]  *** The last 200 lines of the pilot log: ***
[2026-03-27 10:19:12] 2026-03-27 09:18:41,513 | INFO     | --- collectZombieJob: --- 10, [1455564]
[2026-03-27 10:19:12] 2026-03-27 09:18:41,514 | INFO     | zombie collector waiting for pid 1455564
[2026-03-27 10:19:12] 2026-03-27 09:18:41,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-27 10:19:12] 2026-03-27 09:18:41,514 | INFO     | collected zombie processes
[2026-03-27 10:19:12] 2026-03-27 09:18:41,514 | INFO     | will attempt to kill all subprocesses of pid=1455564
[2026-03-27 10:19:12] 2026-03-27 09:18:41,563 | INFO     | process IDs to be killed: [1455564] (in reverse order)
[2026-03-27 10:19:12] 2026-03-27 09:18:41,599 | WARNING  | found no corresponding commands to process id(s)
[2026-03-27 10:19:12] 2026-03-27 09:18:41,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-27 10:19:12] 2026-03-27 09:18:41,601 | INFO     | did not find any defunct processes belonging to 1455564
[2026-03-27 10:19:12] 2026-03-27 09:18:41,602 | INFO     | did not find any defunct processes belonging to 1455564
[2026-03-27 10:19:12] 2026-03-27 09:18:41,603 | INFO     | ready for new job
[2026-03-27 10:19:12] 2026-03-27 09:18:41,603 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-27 10:19:12] 2026-03-27 09:18:41,603 | INFO     | **************************************
[2026-03-27 10:19:12] 2026-03-27 09:18:41,604 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-27 10:19:12] 2026-03-27 09:18:41,604 | INFO     | **************************************
[2026-03-27 10:19:12] 2026-03-27 09:18:41,604 | INFO     | 
[2026-03-27 10:19:12] 2026-03-27 09:18:41,604 | INFO     | architecture information:
[2026-03-27 10:19:12] 2026-03-27 09:18:41,604 | INFO     | executing command: cat /etc/os-release
[2026-03-27 10:19:12] 2026-03-27 09:18:41,620 | INFO     | cat /etc/os-release:
[2026-03-27 10:19:12] NAME="CentOS Linux"
[2026-03-27 10:19:12] VERSION="7 (Core)"
[2026-03-27 10:19:12] ID="centos"
[2026-03-27 10:19:12] ID_LIKE="rhel fedora"
[2026-03-27 10:19:12] VERSION_ID="7"
[2026-03-27 10:19:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-27 10:19:12] ANSI_COLOR="0;31"
[2026-03-27 10:19:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-27 10:19:12] HOME_URL="https://www.centos.org/"
[2026-03-27 10:19:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-27 10:19:12] 
[2026-03-27 10:19:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-27 10:19:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-27 10:19:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-27 10:19:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-27 10:19:12] 
[2026-03-27 10:19:12] 2026-03-27 09:18:41,620 | INFO     | **************************************
[2026-03-27 10:19:12] 2026-03-27 09:18:42,123 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-27 10:19:12] 2026-03-27 09:18:42,142 | INFO     | sufficient remaining disk space (228688134144 B)
[2026-03-27 10:19:12] 2026-03-27 09:18:42,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-27 10:19:12] 2026-03-27 09:18:42,142 | INFO     | current server update state: UPDATING_FINAL
[2026-03-27 10:19:12] 2026-03-27 09:18:42,142 | INFO     | update_server=False
[2026-03-27 10:19:12] 2026-03-27 09:18:42,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-27 10:19:12] 2026-03-27 09:18:42,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-27 10:19:12] 2026-03-27 09:18:42,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-27 10:19:12] 2026-03-27 09:18:42,143 | INFO     | aborting loop
[2026-03-27 10:19:12] 2026-03-27 09:18:42,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-27 10:19:12] 2026-03-27 09:18:42,412 | INFO     | all payload control threads have been joined
[2026-03-27 10:19:12] 2026-03-27 09:18:42,967 | INFO     | all data control threads have been joined
[2026-03-27 10:19:12] 2026-03-27 09:18:43,089 | INFO     | all job control threads have been joined
[2026-03-27 10:19:12] 2026-03-27 09:18:43,148 | INFO     | [job] queue monitor thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:43,148 | INFO     | [job] retrieve thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:43,148 | INFO     | [job] job monitor thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:43,391 | INFO     | [data] copytool_in thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:43,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-27 10:19:12] 2026-03-27 09:18:43,418 | INFO     | [payload] control thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:43,972 | INFO     | [data] control thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:44,044 | INFO     | [payload] execute_payloads thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:44,095 | INFO     | [job] control thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:44,395 | INFO     | [payload] validate_post thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:44,496 | INFO     | [job] create_data_payload thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:44,499 | INFO     | [job] validate thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:44,552 | INFO     | [payload] failed_post thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:44,575 | INFO     | [payload] validate_pre thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:44,789 | INFO     | job.realtimelogging is not enabled
[2026-03-27 10:19:12] 2026-03-27 09:18:45,411 | INFO     | [data] copytool_out thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:45,794 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:46,149 | INFO     | [data] queue_monitor thread has finished
[2026-03-27 10:19:12] 2026-03-27 09:18:50,598 | INFO     | [monitor] cgroup control has ended
[2026-03-27 10:19:12] 2026-03-27 09:18:50,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348471568192)>', '<ExcThread(monitor, started 140347317417728)>']
[2026-03-27 10:19:12] 2026-03-27 09:18:55,630 | INFO     | all workflow threads have been joined
[2026-03-27 10:19:12] 2026-03-27 09:18:55,631 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-27 10:19:12] 2026-03-27 09:18:55,631 | INFO     | traces error code: 0
[2026-03-27 10:19:12] 2026-03-27 09:18:55,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-27 10:19:12] 2026-03-27 09:19:11,307 | INFO     | 10987s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-27 10:19:12] 2026-03-27 09:19:12,375 | INFO     | PID=1451058 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-27 10:19:12] 2026-03-27 09:19:12,376 | INFO     | found 0 job(s) in 20 queues
[2026-03-27 10:19:12] 2026-03-27 09:19:12,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-27 10:19:12] 2026-03-27 09:19:12,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-27 10:19:12] 2026-03-27 09:19:12,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-27 10:19:12] 2026-03-27 09:19:12,376 | INFO     | [monitor] control thread has ended
[2026-03-27 10:19:12] 2026-03-27 09:19:12,451 [wrapper] ==== pilot stdout END ====
[2026-03-27 10:19:12] 2026-03-27 09:19:12,456 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-27 10:19:12] 2026-03-27 09:19:12,460 [wrapper] pilotpid: 1451058
[2026-03-27 10:19:12] 2026-03-27 09:19:12,464 [wrapper] Pilot exit status: 0
[2026-03-27 10:19:12] 2026-03-27 09:19:12,476 [wrapper] pandaids: 7056999876
[2026-03-27 10:19:12] 2026-03-27 09:19:12,500 [wrapper] cleanup supervisor_pilot 1464734 1451059
[2026-03-27 10:19:12] 2026-03-27 09:19:12,503 [wrapper] Test setup, not cleaning
[2026-03-27 10:19:12] 2026-03-27 09:19:12,507 [wrapper] apfmon messages muted
[2026-03-27 10:19:12] 2026-03-27 09:19:12,511 [wrapper] ==== wrapper stdout END ====
[2026-03-27 10:19:12] 2026-03-27 09:19:12,515 [wrapper] ==== wrapper stderr END ====
[2026-03-27 10:19:12]  *** Error codes and diagnostics ***
[2026-03-27 10:19:12]     "exeErrorCode": 0,
[2026-03-27 10:19:12]     "exeErrorDiag": "",
[2026-03-27 10:19:12]     "pilotErrorCode": 0,
[2026-03-27 10:19:12]     "pilotErrorDiag": "",
[2026-03-27 10:19:12]  *** Listing of results directory ***
[2026-03-27 10:19:12] total 464488
[2026-03-27 10:19:12] -rwx------ 1 boinc boinc     36322 Mar 17 01:33 runpilot2-wrapper.sh
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc    585013 Mar 17 01:33 pilot3.tar.gz
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc      5111 Mar 17 01:33 queuedata.json
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc       100 Mar 27 07:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-27 10:19:12] -rwxr-xr-x 1 boinc boinc      7986 Mar 27 07:15 run_atlas
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc       105 Mar 27 07:15 job.xml
[2026-03-27 10:19:12] -rw-r--r-- 2 boinc boinc 235036661 Mar 27 07:15 EVNT.49133113._000004.pool.root.1
[2026-03-27 10:19:12] -rw-r--r-- 2 boinc boinc    597543 Mar 27 07:15 input.tar.gz
[2026-03-27 10:19:12] -rw-r--r-- 2 boinc boinc     15845 Mar 27 07:15 start_atlas.sh
[2026-03-27 10:19:12] drwxrwx--x 2 boinc boinc      4096 Mar 27 07:15 shared
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc         0 Mar 27 07:15 boinc_setup_complete
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc      6376 Mar 27 07:15 init_data.xml
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc         0 Mar 27 07:15 boinc_lockfile
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc      2648 Mar 27 07:15 pandaJob.out
[2026-03-27 10:19:12] -rw------- 1 boinc boinc   1012410 Mar 27 07:15 agis_schedconf.cvmfs.json
[2026-03-27 10:19:12] -rw------- 1 boinc boinc       427 Mar 27 07:15 workernode_map.json
[2026-03-27 10:19:12] drwx------ 5 boinc boinc      4096 Mar 27 07:15 pilot3
[2026-03-27 10:19:12] -rw------- 1 boinc boinc 232861580 Mar 27 10:18 HITS.49176231._000082.pool.root.1
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc       530 Mar 27 10:18 boinc_task_state.xml
[2026-03-27 10:19:12] -rw------- 1 boinc boinc      1039 Mar 27 10:18 memory_monitor_summary.json
[2026-03-27 10:19:12] -rw------- 1 boinc boinc        95 Mar 27 10:18 pilot_heartbeat.json
[2026-03-27 10:19:12] -rw------- 1 boinc boinc   1511579 Mar 27 10:18 agis_ddmendpoints.agis.ALL.json
[2026-03-27 10:19:12] -rw------- 1 boinc boinc    350317 Mar 27 10:18 log.49176231._000082.job.log.tgz.1
[2026-03-27 10:19:12] -rw------- 1 boinc boinc      6316 Mar 27 10:18 heartbeat.json
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc        28 Mar 27 10:19 wrapper_checkpoint.txt
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc      8192 Mar 27 10:19 boinc_mmap_file
[2026-03-27 10:19:12] -rw------- 1 boinc boinc       863 Mar 27 10:19 pilotlog.txt
[2026-03-27 10:19:12] -rw------- 1 boinc boinc   1556420 Mar 27 10:19 log.49176231._000082.job.log.1
[2026-03-27 10:19:12] -rw------- 1 boinc boinc       357 Mar 27 10:19 output.list
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc       620 Mar 27 10:19 runtime_log
[2026-03-27 10:19:12] -rw------- 1 boinc boinc   1925120 Mar 27 10:19 result.tar.gz
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc      8897 Mar 27 10:19 runtime_log.err
[2026-03-27 10:19:12] -rw------- 1 boinc boinc       661 Mar 27 10:19 SG7MDmrYXM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOFzLDmWAmU8m.diag
[2026-03-27 10:19:12] -rw-r--r-- 1 boinc boinc     10841 Mar 27 10:19 stderr.txt
[2026-03-27 10:19:12] HITS file was successfully produced:
[2026-03-27 10:19:12] -rw------- 1 boinc boinc 232861580 Mar 27 10:18 shared/HITS.pool.root.1
[2026-03-27 10:19:12]  *** Contents of shared directory: ***
[2026-03-27 10:19:12] total 459420
[2026-03-27 10:19:12] -rw-r--r-- 2 boinc boinc 235036661 Mar 27 07:15 ATLAS.root_0
[2026-03-27 10:19:12] -rw-r--r-- 2 boinc boinc    597543 Mar 27 07:15 input.tar.gz
[2026-03-27 10:19:12] -rw-r--r-- 2 boinc boinc     15845 Mar 27 07:15 start_atlas.sh
[2026-03-27 10:19:12] -rw------- 1 boinc boinc 232861580 Mar 27 10:18 HITS.pool.root.1
[2026-03-27 10:19:12] -rw------- 1 boinc boinc   1925120 Mar 27 10:19 result.tar.gz
10:19:14 (1446943): run_atlas exited; CPU time 42393.019737
10:19:14 (1446943): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN