Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:44:00 (3747550): wrapper (7.7.26015): starting
00:44:00 (3747550): wrapper: running run_atlas (--nthreads 3)
[2026-03-26 00:44:00] Arguments: --nthreads 3
[2026-03-26 00:44:00] Threads: 3
[2026-03-26 00:44:00] Checking for CVMFS
[2026-03-26 00:44:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 00:44:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 00:44:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 00:44:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 00:44:01] 2.9.2.0 3398041 4593 72404 157701 0 49 31485268 36864001 0 130560 0 1295126 99.975 158359 14757 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-26 00:44:01] CVMFS is ok
[2026-03-26 00:44:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 00:44:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 00:44:01] Further information can be found at the LHC@home message board.
[2026-03-26 00:44:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 00:44:01] Checking for apptainer binary...
[2026-03-26 00:44:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-26 00:44:01] Running /usr/bin/apptainer --version
[2026-03-26 00:44:01] apptainer version 1.4.1-1.1
[2026-03-26 00:44:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 00:44:01] belleA265
[2026-03-26 00:44:01] apptainer works
[2026-03-26 00:44:01] Set ATHENA_PROC_NUMBER=3
[2026-03-26 00:44:01] Set ATHENA_CORE_NUMBER=3
[2026-03-26 00:44:01] Starting ATLAS job with PandaID=7056986208
[2026-03-26 00:44:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 04:29:48]  *** The last 200 lines of the pilot log: ***
[2026-03-26 04:29:48] 2026-03-26 03:28:56,070 | INFO     | --- collectZombieJob: --- 10, [3756026]
[2026-03-26 04:29:48] 2026-03-26 03:28:56,070 | INFO     | zombie collector waiting for pid 3756026
[2026-03-26 04:29:48] 2026-03-26 03:28:56,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 04:29:48] 2026-03-26 03:28:56,071 | INFO     | collected zombie processes
[2026-03-26 04:29:48] 2026-03-26 03:28:56,071 | INFO     | will attempt to kill all subprocesses of pid=3756026
[2026-03-26 04:29:48] 2026-03-26 03:28:56,107 | INFO     | process IDs to be killed: [3756026] (in reverse order)
[2026-03-26 04:29:48] 2026-03-26 03:28:56,132 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 04:29:48] 2026-03-26 03:28:56,132 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 04:29:48] 2026-03-26 03:28:56,133 | INFO     | did not find any defunct processes belonging to 3756026
[2026-03-26 04:29:48] 2026-03-26 03:28:56,134 | INFO     | did not find any defunct processes belonging to 3756026
[2026-03-26 04:29:48] 2026-03-26 03:28:56,134 | INFO     | ready for new job
[2026-03-26 04:29:48] 2026-03-26 03:28:56,134 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 04:29:48] 2026-03-26 03:28:56,135 | INFO     | **************************************
[2026-03-26 04:29:48] 2026-03-26 03:28:56,135 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 04:29:48] 2026-03-26 03:28:56,135 | INFO     | **************************************
[2026-03-26 04:29:48] 2026-03-26 03:28:56,135 | INFO     | 
[2026-03-26 04:29:48] 2026-03-26 03:28:56,135 | INFO     | architecture information:
[2026-03-26 04:29:48] 2026-03-26 03:28:56,135 | INFO     | executing command: cat /etc/os-release
[2026-03-26 04:29:48] 2026-03-26 03:28:56,144 | INFO     | cat /etc/os-release:
[2026-03-26 04:29:48] NAME="CentOS Linux"
[2026-03-26 04:29:48] VERSION="7 (Core)"
[2026-03-26 04:29:48] ID="centos"
[2026-03-26 04:29:48] ID_LIKE="rhel fedora"
[2026-03-26 04:29:48] VERSION_ID="7"
[2026-03-26 04:29:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 04:29:48] ANSI_COLOR="0;31"
[2026-03-26 04:29:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 04:29:48] HOME_URL="https://www.centos.org/"
[2026-03-26 04:29:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 04:29:48] 
[2026-03-26 04:29:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 04:29:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 04:29:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 04:29:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 04:29:48] 
[2026-03-26 04:29:48] 2026-03-26 03:28:56,145 | INFO     | **************************************
[2026-03-26 04:29:48] 2026-03-26 03:28:56,648 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-26 04:29:48] 2026-03-26 03:28:56,662 | INFO     | sufficient remaining disk space (323109257216 B)
[2026-03-26 04:29:48] 2026-03-26 03:28:56,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 04:29:48] 2026-03-26 03:28:56,662 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 04:29:48] 2026-03-26 03:28:56,662 | INFO     | update_server=False
[2026-03-26 04:29:48] 2026-03-26 03:28:56,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 04:29:48] 2026-03-26 03:28:56,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 04:29:48] 2026-03-26 03:28:56,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 04:29:48] 2026-03-26 03:28:56,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 04:29:48] 2026-03-26 03:28:56,767 | INFO     | aborting loop
[2026-03-26 04:29:48] 2026-03-26 03:28:56,828 | INFO     | all data control threads have been joined
[2026-03-26 04:29:48] 2026-03-26 03:28:57,014 | INFO     | all payload control threads have been joined
[2026-03-26 04:29:48] 2026-03-26 03:28:57,668 | INFO     | [job] retrieve thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:57,669 | INFO     | [job] queue monitor thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:57,773 | INFO     | [job] job monitor thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:57,811 | INFO     | all job control threads have been joined
[2026-03-26 04:29:48] 2026-03-26 03:28:57,834 | INFO     | [data] control thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,020 | INFO     | [payload] control thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,047 | INFO     | [data] copytool_in thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,153 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,263 | INFO     | [job] validate thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,293 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,302 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,381 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,499 | INFO     | [payload] validate_post thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,666 | INFO     | [payload] failed_post thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,668 | INFO     | [data] copytool_out thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:58,817 | INFO     | [job] control thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:28:59,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 04:29:48] 2026-03-26 03:29:03,472 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 04:29:48] 2026-03-26 03:29:14,374 [wrapper] supervise_pilot (15 min periods counter: 16)
[2026-03-26 04:29:48] 2026-03-26 03:29:27,124 | INFO     | PID=3751590 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-26 04:29:48] 2026-03-26 03:29:27,124 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 04:29:48] 2026-03-26 03:29:27,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 04:29:48] 2026-03-26 03:29:27,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 04:29:48] 2026-03-26 03:29:42,616 | INFO     | [monitor] cgroup control has ended
[2026-03-26 04:29:48] 2026-03-26 03:29:43,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139783620323136)>', '<ExcThread(monitor, started 139782982194944)>']
[2026-03-26 04:29:48] 2026-03-26 03:29:44,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 04:29:48] 2026-03-26 03:29:44,204 | INFO     | [monitor] control thread has ended
[2026-03-26 04:29:48] 2026-03-26 03:29:48,291 | INFO     | all workflow threads have been joined
[2026-03-26 04:29:48] 2026-03-26 03:29:48,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 04:29:48] 2026-03-26 03:29:48,292 | INFO     | traces error code: 0
[2026-03-26 04:29:48] 2026-03-26 03:29:48,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 04:29:48] 2026-03-26 03:29:48,338 [wrapper] ==== pilot stdout END ====
[2026-03-26 04:29:48] 2026-03-26 03:29:48,342 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 04:29:48] 2026-03-26 03:29:48,345 [wrapper] pilotpid: 3751590
[2026-03-26 04:29:48] 2026-03-26 03:29:48,347 [wrapper] Pilot exit status: 0
[2026-03-26 04:29:48] 2026-03-26 03:29:48,356 [wrapper] pandaids: 7056986208
[2026-03-26 04:29:48] 2026-03-26 03:29:48,373 [wrapper] cleanup supervisor_pilot 3762717 3751591
[2026-03-26 04:29:48] 2026-03-26 03:29:48,376 [wrapper] Test setup, not cleaning
[2026-03-26 04:29:48] 2026-03-26 03:29:48,378 [wrapper] apfmon messages muted
[2026-03-26 04:29:48] 2026-03-26 03:29:48,381 [wrapper] ==== wrapper stdout END ====
[2026-03-26 04:29:48] 2026-03-26 03:29:48,384 [wrapper] ==== wrapper stderr END ====
[2026-03-26 04:29:48]  *** Error codes and diagnostics ***
[2026-03-26 04:29:48]     "exeErrorCode": 0,
[2026-03-26 04:29:48]     "exeErrorDiag": "",
[2026-03-26 04:29:48]     "pilotErrorCode": 0,
[2026-03-26 04:29:48]     "pilotErrorDiag": "",
[2026-03-26 04:29:48]  *** Listing of results directory ***
[2026-03-26 04:29:48] total 486828
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc    585013 Mar 16 22:25 pilot3.tar.gz
[2026-03-26 04:29:48] -rwx------ 1 boinc boinc     36322 Mar 16 22:29 runpilot2-wrapper.sh
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc      5111 Mar 16 22:30 queuedata.json
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc       100 Mar 26 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 04:29:48] -rwxr-xr-x 1 boinc boinc      7986 Mar 26 00:43 run_atlas
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc       105 Mar 26 00:43 job.xml
[2026-03-26 04:29:48] -rw-r--r-- 2 boinc boinc 243226496 Mar 26 00:44 EVNT.49137741._000011.pool.root.1
[2026-03-26 04:29:48] -rw-r--r-- 2 boinc boinc    597548 Mar 26 00:44 input.tar.gz
[2026-03-26 04:29:48] -rw-r--r-- 2 boinc boinc     15845 Mar 26 00:44 start_atlas.sh
[2026-03-26 04:29:48] drwxrwx--x 2 boinc boinc      4096 Mar 26 00:44 shared
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc         0 Mar 26 00:44 boinc_setup_complete
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc      6198 Mar 26 00:44 init_data.xml
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc         0 Mar 26 00:44 boinc_lockfile
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc      2633 Mar 26 00:44 pandaJob.out
[2026-03-26 04:29:48] -rw------- 1 boinc boinc   1012179 Mar 26 00:44 agis_schedconf.cvmfs.json
[2026-03-26 04:29:48] -rw------- 1 boinc boinc       429 Mar 26 00:44 workernode_map.json
[2026-03-26 04:29:48] drwx------ 5 boinc boinc      4096 Mar 26 00:44 pilot3
[2026-03-26 04:29:48] -rw------- 1 boinc boinc 246805273 Mar 26 04:28 HITS.49182650._000263.pool.root.1
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc       530 Mar 26 04:28 boinc_task_state.xml
[2026-03-26 04:29:48] -rw------- 1 boinc boinc      1016 Mar 26 04:28 memory_monitor_summary.json
[2026-03-26 04:29:48] -rw------- 1 boinc boinc   1511579 Mar 26 04:28 agis_ddmendpoints.agis.ALL.json
[2026-03-26 04:29:48] -rw------- 1 boinc boinc    376126 Mar 26 04:28 log.49182650._000263.job.log.tgz.1
[2026-03-26 04:29:48] -rw------- 1 boinc boinc      6314 Mar 26 04:28 heartbeat.json
[2026-03-26 04:29:48] -rw------- 1 boinc boinc        95 Mar 26 04:29 pilot_heartbeat.json
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc      8192 Mar 26 04:29 boinc_mmap_file
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc        28 Mar 26 04:29 wrapper_checkpoint.txt
[2026-03-26 04:29:48] -rw------- 1 boinc boinc      4748 Mar 26 04:29 pilotlog.txt
[2026-03-26 04:29:48] -rw------- 1 boinc boinc   1900521 Mar 26 04:29 log.49182650._000263.job.log.1
[2026-03-26 04:29:48] -rw------- 1 boinc boinc       357 Mar 26 04:29 output.list
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc       620 Mar 26 04:29 runtime_log
[2026-03-26 04:29:48] -rw------- 1 boinc boinc   2293760 Mar 26 04:29 result.tar.gz
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc      8912 Mar 26 04:29 runtime_log.err
[2026-03-26 04:29:48] -rw------- 1 boinc boinc       663 Mar 26 04:29 WSONDmHgUM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm49vLDmXu5EHn.diag
[2026-03-26 04:29:48] -rw-r--r-- 1 boinc boinc     10715 Mar 26 04:29 stderr.txt
[2026-03-26 04:29:48] HITS file was successfully produced:
[2026-03-26 04:29:48] -rw------- 1 boinc boinc 246805273 Mar 26 04:28 shared/HITS.pool.root.1
[2026-03-26 04:29:48]  *** Contents of shared directory: ***
[2026-03-26 04:29:48] total 481396
[2026-03-26 04:29:48] -rw-r--r-- 2 boinc boinc 243226496 Mar 26 00:44 ATLAS.root_0
[2026-03-26 04:29:48] -rw-r--r-- 2 boinc boinc    597548 Mar 26 00:44 input.tar.gz
[2026-03-26 04:29:48] -rw-r--r-- 2 boinc boinc     15845 Mar 26 00:44 start_atlas.sh
[2026-03-26 04:29:48] -rw------- 1 boinc boinc 246805273 Mar 26 04:28 HITS.pool.root.1
[2026-03-26 04:29:48] -rw------- 1 boinc boinc   2293760 Mar 26 04:29 result.tar.gz
04:29:49 (3747550): run_atlas exited; CPU time 39262.145101
04:29:49 (3747550): called boinc_finish(0)

</stderr_txt>
]]>

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