Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:37:28 (32097): wrapper (7.7.26015): starting
09:37:28 (32097): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 09:37:28] Arguments: --nthreads 8
[2026-03-25 09:37:28] Threads: 8
[2026-03-25 09:37:28] Checking for CVMFS
[2026-03-25 09:37:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 09:37:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 09:37:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 09:37:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 09:37:29] 2.11.0.0 6016 29954 82620 157676 0 188 2202684 4096001 4189 130560 1 7818582 99.902 1618070 265 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 09:37:29] CVMFS is ok
[2026-03-25 09:37:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 09:37:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 09:37:29] Further information can be found at the LHC@home message board.
[2026-03-25 09:37:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 09:37:29] Checking for apptainer binary...
[2026-03-25 09:37:29] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 09:37:29] apptainer is not installed, using version from CVMFS
[2026-03-25 09:37:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 09:37:29] WARNING: Environment variable TMPDIR already has value [/tmp/job_11392719/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node027
[2026-03-25 09:37:29] apptainer works
[2026-03-25 09:37:29] Set ATHENA_PROC_NUMBER=8
[2026-03-25 09:37:29] Set ATHENA_CORE_NUMBER=8
[2026-03-25 09:37:29] Starting ATLAS job with PandaID=7056986006
[2026-03-25 09:37:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11392719/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 11:38:53]  *** The last 200 lines of the pilot log: ***
[2026-03-25 11:38:53] 2026-03-25 10:38:19,122 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 11:38:53] 2026-03-25 10:38:19,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 11:38:53] 2026-03-25 10:38:19,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 11:38:53] 2026-03-25 10:38:19,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 11:38:53] 2026-03-25 10:38:19,124 | INFO     | fitting pss+swap vs Time
[2026-03-25 11:38:53] 2026-03-25 10:38:19,124 | INFO     | sum of square deviations: 522502820.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,124 | INFO     | sum of deviations: 5839202064.000001
[2026-03-25 11:38:53] 2026-03-25 10:38:19,124 | INFO     | mean x: 1774431471.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,124 | INFO     | mean y: 2484053.25210084
[2026-03-25 11:38:53] 2026-03-25 10:38:19,124 | INFO     | intersect: -19827579079.976074
[2026-03-25 11:38:53] 2026-03-25 10:38:19,124 | INFO     | chi2: 1.8360832499354436
[2026-03-25 11:38:53] 2026-03-25 10:38:19,124 | INFO     | sum of square deviations: 459366752.5
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | sum of deviations: 12801917256.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | mean x: 1774431318.5
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | mean y: 2500250.3157894737
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | intersect: -49448451069.65807
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | chi2: 1.134663105654197
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | current chi2=1.134663105654197 (change=38.20197936590885 %)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | sum of square deviations: 401533110.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | sum of deviations: 12089379306.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | mean x: 1774431166.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | mean y: 2498370.256880734
[2026-03-25 11:38:53] 2026-03-25 10:38:19,125 | INFO     | intersect: -53422165459.238655
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | chi2: 1.1362552245844268
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | current chi2=1.1362552245844268 (change=-0.14031644479283378 %)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | right removable region: 108
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | sum of square deviations: 459366752.5
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | sum of deviations: -8225030861.5
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | mean x: 1774431623.5
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | mean y: 2517291.5877192984
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | intersect: 31773982652.28347
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | chi2: 0.7297815101434975
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | current chi2=0.7297815101434975 (change=60.25335397133238 %)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,126 | INFO     | sum of square deviations: 401533110.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | sum of deviations: -8418754692.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | mean x: 1774431776.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | mean y: 2517787.247706422
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | intersect: 37206189085.57201
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | chi2: 0.7289198259375441
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | current chi2=0.7289198259375441 (change=0.11807427209054742 %)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | left removable region: 20
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | sum of square deviations: 211285822.0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | sum of deviations: -1039907504.0000001
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | mean x: 1774431745.5
[2026-03-25 11:38:53] 2026-03-25 10:38:19,127 | INFO     | mean y: 2534994.3181818184
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | intersect: 8735941098.023846
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | chi2: 0.002857165695090513
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | current memory leak: -4.92 B/s (using 88 data points, chi2=0.00)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | could have reported an average CPU frequency of 2411 MHz (8 samples)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | ..............................
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | . Timing measurements:
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | . get job = 0 s
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | . initial setup = 2 s
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | . payload setup = 3 s
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | . stage-in = 0 s
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | . payload execution = 7220 s
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | . stage-out = 0 s
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | . log creation = 0 s
[2026-03-25 11:38:53] 2026-03-25 10:38:19,128 | INFO     | ..............................
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | 
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | job summary report
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | --------------------------------------------------
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | PanDA job id: 7056986006
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | task id: 49182650
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | errors: (none)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | pilot state: finished 
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | transexitcode: 0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | exeerrorcode: 0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | exeerrordiag: 
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | exitcode: 0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | exitmsg: OK
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | cpuconsumptiontime: 53200 s
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | nevents: 400
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | neventsw: 0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | pid: 10411
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | pgrp: 10411
[2026-03-25 11:38:53] 2026-03-25 10:38:19,176 | INFO     | corecount: 8
[2026-03-25 11:38:53] 2026-03-25 10:38:19,177 | INFO     | event service: False
[2026-03-25 11:38:53] 2026-03-25 10:38:19,177 | INFO     | sizes: {0: 2280449, 11: 2280449, 7227: 2307962, 7228: 2316990, 7230: 2317046, 7232: 2317240}
[2026-03-25 11:38:53] 2026-03-25 10:38:19,177 | INFO     | --------------------------------------------------
[2026-03-25 11:38:53] 2026-03-25 10:38:19,177 | INFO     | 
[2026-03-25 11:38:53] 2026-03-25 10:38:19,177 | INFO     | executing command: ls -lF /tmp/job_11392719/atlas/pilot/slots/0
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,188 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,188 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 11:38:53] 2026-03-25 10:38:19,188 | INFO     | job 7056986006 has completed (purged errors)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,188 | INFO     | overall cleanup function is called
[2026-03-25 11:38:53] 2026-03-25 10:38:19,370 | WARNING  | process 10411 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 11:38:53] 2026-03-25 10:38:19,447 | INFO     | using path: /tmp/job_11392719/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 11:38:53] 2026-03-25 10:38:19,535 | INFO     | number of running child processes to parent process 10411: 1
[2026-03-25 11:38:53] 2026-03-25 10:38:19,536 | INFO     | maximum number of monitored processes: 6
[2026-03-25 11:38:53] 2026-03-25 10:38:19,536 | INFO     | aborting job monitoring since job object (job id=7056986006) has expired
[2026-03-25 11:38:53] 2026-03-25 10:38:20,194 | INFO     | --- collectZombieJob: --- 10, [10411]
[2026-03-25 11:38:53] 2026-03-25 10:38:20,194 | INFO     | zombie collector waiting for pid 10411
[2026-03-25 11:38:53] 2026-03-25 10:38:20,194 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 11:38:53] 2026-03-25 10:38:20,194 | INFO     | collected zombie processes
[2026-03-25 11:38:53] 2026-03-25 10:38:20,194 | INFO     | will attempt to kill all subprocesses of pid=10411
[2026-03-25 11:38:53] 2026-03-25 10:38:20,281 | INFO     | process IDs to be killed: [10411] (in reverse order)
[2026-03-25 11:38:53] 2026-03-25 10:38:20,314 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 11:38:53] 2026-03-25 10:38:20,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 11:38:53] 2026-03-25 10:38:20,317 | INFO     | did not find any defunct processes belonging to 10411
[2026-03-25 11:38:53] 2026-03-25 10:38:20,321 | INFO     | did not find any defunct processes belonging to 10411
[2026-03-25 11:38:53] 2026-03-25 10:38:20,321 | INFO     | ready for new job
[2026-03-25 11:38:53] 2026-03-25 10:38:20,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 11:38:53] 2026-03-25 10:38:20,322 | INFO     | **************************************
[2026-03-25 11:38:53] 2026-03-25 10:38:20,322 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 11:38:53] 2026-03-25 10:38:20,322 | INFO     | **************************************
[2026-03-25 11:38:53] 2026-03-25 10:38:20,322 | INFO     | 
[2026-03-25 11:38:53] 2026-03-25 10:38:20,335 | INFO     | architecture information:
[2026-03-25 11:38:53] 2026-03-25 10:38:20,335 | INFO     | executing command: cat /etc/os-release
[2026-03-25 11:38:53] 2026-03-25 10:38:20,341 | INFO     | cat /etc/os-release:
[2026-03-25 11:38:53] NAME="CentOS Linux"
[2026-03-25 11:38:53] VERSION="7 (Core)"
[2026-03-25 11:38:53] ID="centos"
[2026-03-25 11:38:53] ID_LIKE="rhel fedora"
[2026-03-25 11:38:53] VERSION_ID="7"
[2026-03-25 11:38:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 11:38:53] ANSI_COLOR="0;31"
[2026-03-25 11:38:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 11:38:53] HOME_URL="https://www.centos.org/"
[2026-03-25 11:38:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 11:38:53] 
[2026-03-25 11:38:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 11:38:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 11:38:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 11:38:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 11:38:53] 
[2026-03-25 11:38:53] 2026-03-25 10:38:20,341 | INFO     | **************************************
[2026-03-25 11:38:53] 2026-03-25 10:38:20,844 | INFO     | executing command: df -mP /tmp/job_11392719/atlas/pilot/slots/0
[2026-03-25 11:38:53] 2026-03-25 10:38:20,850 | INFO     | sufficient remaining disk space (227570352128 B)
[2026-03-25 11:38:53] 2026-03-25 10:38:20,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 11:38:53] 2026-03-25 10:38:20,850 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 11:38:53] 2026-03-25 10:38:20,850 | INFO     | update_server=False
[2026-03-25 11:38:53] 2026-03-25 10:38:20,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 11:38:53] 2026-03-25 10:38:20,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:38:53] 2026-03-25 10:38:20,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 11:38:53] 2026-03-25 10:38:20,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 11:38:53] 2026-03-25 10:38:20,851 | INFO     | aborting loop
[2026-03-25 11:38:53] 2026-03-25 10:38:21,786 | INFO     | all job control threads have been joined
[2026-03-25 11:38:53] 2026-03-25 10:38:21,855 | INFO     | [job] retrieve thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:21,856 | INFO     | [job] queue monitor thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:21,856 | INFO     | [job] job monitor thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:21,874 | INFO     | all data control threads have been joined
[2026-03-25 11:38:53] 2026-03-25 10:38:22,276 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:22,281 | INFO     | all payload control threads have been joined
[2026-03-25 11:38:53] 2026-03-25 10:38:22,792 | INFO     | [job] control thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:22,833 | INFO     | [payload] validate_post thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:22,856 | INFO     | [data] copytool_out thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:22,879 | INFO     | [data] control thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:22,922 | INFO     | [job] validate thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:23,020 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:23,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 11:38:53] 2026-03-25 10:38:23,164 | INFO     | [data] copytool_in thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:23,212 | INFO     | [payload] failed_post thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:23,286 | INFO     | [payload] control thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:23,304 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:27,059 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:31,246 | INFO     | job.realtimelogging is not enabled
[2026-03-25 11:38:53] 2026-03-25 10:38:32,251 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 11:38:53] 2026-03-25 10:38:47,123 | INFO     | [monitor] cgroup control has ended
[2026-03-25 11:38:53] 2026-03-25 10:38:48,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-25 11:38:53] 2026-03-25 10:38:51,288 | INFO     | PID=4728 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-25 11:38:53] 2026-03-25 10:38:51,288 | INFO     | .. there are 2 such processes running
[2026-03-25 11:38:53] 2026-03-25 10:38:51,288 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 11:38:53] 2026-03-25 10:38:51,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 11:38:53] 2026-03-25 10:38:51,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 11:38:53] 2026-03-25 10:38:51,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 11:38:53] 2026-03-25 10:38:51,289 | INFO     | [monitor] control thread has ended
[2026-03-25 11:38:53] 2026-03-25 10:38:53,319 | INFO     | all workflow threads have been joined
[2026-03-25 11:38:53] 2026-03-25 10:38:53,319 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 11:38:53] 2026-03-25 10:38:53,319 | INFO     | traces error code: 0
[2026-03-25 11:38:53] 2026-03-25 10:38:53,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 11:38:53] 2026-03-25 10:38:53,370 [wrapper] ==== pilot stdout END ====
[2026-03-25 11:38:53] 2026-03-25 10:38:53,371 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 11:38:53] 2026-03-25 10:38:53,373 [wrapper] pilotpid: 4728
[2026-03-25 11:38:53] 2026-03-25 10:38:53,374 [wrapper] Pilot exit status: 0
[2026-03-25 11:38:53] 2026-03-25 10:38:53,378 [wrapper] pandaids: 7056986006
[2026-03-25 11:38:53] 2026-03-25 10:38:53,401 [wrapper] cleanup supervisor_pilot 14145 4729
[2026-03-25 11:38:53] 2026-03-25 10:38:53,402 [wrapper] Test setup, not cleaning
[2026-03-25 11:38:53] 2026-03-25 10:38:53,403 [wrapper] apfmon messages muted
[2026-03-25 11:38:53] 2026-03-25 10:38:53,404 [wrapper] ==== wrapper stdout END ====
[2026-03-25 11:38:53] 2026-03-25 10:38:53,406 [wrapper] ==== wrapper stderr END ====
[2026-03-25 11:38:53]  *** Error codes and diagnostics ***
[2026-03-25 11:38:53]     "exeErrorCode": 0,
[2026-03-25 11:38:53]     "exeErrorDiag": "",
[2026-03-25 11:38:53]     "pilotErrorCode": 0,
[2026-03-25 11:38:53]     "pilotErrorDiag": "",
[2026-03-25 11:38:53]  *** Listing of results directory ***
[2026-03-25 11:38:53] total 479960
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user    585013 Mar 16 22:25 pilot3.tar.gz
[2026-03-25 11:38:53] -rwx------ 1 mf493845 unix-user     36322 Mar 16 22:26 runpilot2-wrapper.sh
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user      5111 Mar 16 22:26 queuedata.json
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user       100 Mar 25 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 11:38:53] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 08:35 run_atlas
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user       105 Mar 25 08:35 job.xml
[2026-03-25 11:38:53] -rw-r--r-- 2 mf493845 unix-user 243553613 Mar 25 09:37 EVNT.49137741._000007.pool.root.1
[2026-03-25 11:38:53] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:37 start_atlas.sh
[2026-03-25 11:38:53] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 09:37 shared
[2026-03-25 11:38:53] -rw-r--r-- 2 mf493845 unix-user    597547 Mar 25 09:37 input.tar.gz
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user      6390 Mar 25 09:37 init_data.xml
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user         0 Mar 25 09:37 boinc_setup_complete
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user      8192 Mar 25 09:37 boinc_mmap_file
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user         0 Mar 25 09:37 boinc_lockfile
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user      2632 Mar 25 09:37 pandaJob.out
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user   1010820 Mar 25 09:37 agis_schedconf.cvmfs.json
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user   1511579 Mar 25 09:37 agis_ddmendpoints.agis.ALL.json
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user       415 Mar 25 09:37 workernode_map.json
[2026-03-25 11:38:53] drwx------ 5 mf493845 unix-user       440 Mar 25 09:37 pilot3
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user 241163880 Mar 25 11:37 HITS.49182650._000154.pool.root.1
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user      1018 Mar 25 11:38 memory_monitor_summary.json
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user    351662 Mar 25 11:38 log.49182650._000154.job.log.tgz.1
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user        95 Mar 25 11:38 pilot_heartbeat.json
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user      6303 Mar 25 11:38 heartbeat.json
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user      4902 Mar 25 11:38 pilotlog.txt
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user   1069596 Mar 25 11:38 log.49182650._000154.job.log.1
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user       357 Mar 25 11:38 output.list
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user       620 Mar 25 11:38 runtime_log
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user   1443840 Mar 25 11:38 result.tar.gz
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user      9219 Mar 25 11:38 runtime_log.err
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user       644 Mar 25 11:38 eDVLDmVdUM9n9Rq4apOajLDm4fhM0noT9bVooX4SDms4vLDm9lcKbn.diag
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user     21498 Mar 25 11:38 stderr.txt
[2026-03-25 11:38:53] HITS file was successfully produced:
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user 241163880 Mar 25 11:37 shared/HITS.pool.root.1
[2026-03-25 11:38:53]  *** Contents of shared directory: ***
[2026-03-25 11:38:53] total 475372
[2026-03-25 11:38:53] -rw-r--r-- 2 mf493845 unix-user 243553613 Mar 25 09:37 ATLAS.root_0
[2026-03-25 11:38:53] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 09:37 start_atlas.sh
[2026-03-25 11:38:53] -rw-r--r-- 2 mf493845 unix-user    597547 Mar 25 09:37 input.tar.gz
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user 241163880 Mar 25 11:37 HITS.pool.root.1
[2026-03-25 11:38:53] -rw------- 1 mf493845 unix-user   1443840 Mar 25 11:38 result.tar.gz
11:38:54 (32097): run_atlas exited; CPU time 53315.386183
11:38:54 (32097): called boinc_finish(0)

</stderr_txt>
]]>

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