Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:14:12 (315218): wrapper (7.7.26015): starting
16:14:12 (315218): wrapper: running run_atlas (--nthreads 12)
[2026-03-25 16:14:12] Arguments: --nthreads 12
[2026-03-25 16:14:12] Threads: 12
[2026-03-25 16:14:12] Checking for CVMFS
[2026-03-25 16:14:12] No cvmfs_config command found, will try listing directly
[2026-03-25 16:14:12] CVMFS is ok
[2026-03-25 16:14:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 16:14:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 16:14:12] Further information can be found at the LHC@home message board.
[2026-03-25 16:14:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 16:14:12] Checking for apptainer binary...
[2026-03-25 16:14:12] which: no apptainer in ((null))
[2026-03-25 16:14:12] apptainer is not installed, using version from CVMFS
[2026-03-25 16:14:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 16:14:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-25 16:14:12] apptainer works
[2026-03-25 16:14:12] Set ATHENA_PROC_NUMBER=12
[2026-03-25 16:14:12] Set ATHENA_CORE_NUMBER=12
[2026-03-25 16:14:12] Starting ATLAS job with PandaID=7063904882
[2026-03-25 16:14:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 17:07:47]  *** The last 200 lines of the pilot log: ***
[2026-03-25 17:07:47]  protocol_id=None
[2026-03-25 17:07:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-25 17:07:47]  replicas=None
[2026-03-25 17:07:47]  scope=mc23_13p6TeV
[2026-03-25 17:07:47]  status=None
[2026-03-25 17:07:47]  status_code=0
[2026-03-25 17:07:47]  storage_token=
[2026-03-25 17:07:47]  surl=/var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063904882/log.49181568._000124.job.log.tgz.1
[2026-03-25 17:07:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/4c/log.49181568._000124.job.log.tgz.1
[2026-03-25 17:07:47]  workdir=None
[2026-03-25 17:07:47] ]
[2026-03-25 17:07:47] 2026-03-25 16:07:09,306 | INFO     | transferring file log.49181568._000124.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063904882/log.49181568._000124.job.log.tgz.1 to /var/lib/
[2026-03-25 17:07:47] 2026-03-25 16:07:09,306 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063904882/log.49181568._000124.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/1/
[2026-03-25 17:07:47] 2026-03-25 16:07:09,321 | INFO     | adding to output.list: log.49181568._000124.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/4c/log.49181568._000124.job.log.tg
[2026-03-25 17:07:47] 2026-03-25 16:07:09,322 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-25 17:07:47] 2026-03-25 16:07:09,322 | INFO     | summary of transferred files:
[2026-03-25 17:07:47] 2026-03-25 16:07:09,322 | INFO     |  -- lfn=log.49181568._000124.job.log.tgz.1, status_code=0, status=transferred
[2026-03-25 17:07:47] 2026-03-25 16:07:09,322 | INFO     | stage-out finished correctly
[2026-03-25 17:07:47] 2026-03-25 16:07:09,554 | INFO     | time since job start (3165s) is within the limit (345600.0s)
[2026-03-25 17:07:47] 2026-03-25 16:07:11,559 | INFO     | time since job start (3167s) is within the limit (345600.0s)
[2026-03-25 17:07:47] 2026-03-25 16:07:11,909 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-25 17:07:47] 2026-03-25 16:07:13,565 | INFO     | time since job start (3169s) is within the limit (345600.0s)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,419 | WARNING  | process 325793 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 17:07:47] 2026-03-25 16:07:14,419 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063904882/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,723 | INFO     | job 7063904882 has state=finished
[2026-03-25 17:07:47] 2026-03-25 16:07:14,723 | INFO     | preparing for final server update for job 7063904882 in state='finished'
[2026-03-25 17:07:47] 2026-03-25 16:07:14,723 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063904882/jobReport.json
[2026-03-25 17:07:47] 2026-03-25 16:07:14,725 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/1/workernode_map.json
[2026-03-25 17:07:47] 2026-03-25 16:07:14,725 | INFO     | this job has now completed (state=finished)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,725 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,725 | INFO     | log transfer has been attempted: DONE
[2026-03-25 17:07:47] 2026-03-25 16:07:14,725 | INFO     | job 7063904882 has finished - writing final server update
[2026-03-25 17:07:47] 2026-03-25 16:07:14,725 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2330363/.job.ad'
[2026-03-25 17:07:47] 2026-03-25 16:07:14,725 | INFO     | total number of processed events: 400 (read)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,746 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7063904882/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,747 | INFO     | extracted standard info from prmon json
[2026-03-25 17:07:47] 2026-03-25 16:07:14,747 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 17:07:47] 2026-03-25 16:07:14,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 17:07:47] 2026-03-25 16:07:14,747 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 17:07:47] 2026-03-25 16:07:14,748 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 17:07:47] 2026-03-25 16:07:14,748 | INFO     | fitting pss+swap vs Time
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | sum of square deviations: 28242390.0
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | sum of deviations: 240477494.00000003
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | mean x: 1774453332.0
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | mean y: 2713711.711111111
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | intersect: -15106350730.0486
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | chi2: 0.0004170279196284248
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | current memory leak: 8.51 B/s (using 45 data points, chi2=0.00)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | could have reported an average CPU frequency of 3674 MHz (5 samples)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | ..............................
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | . Timing measurements:
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | . get job = 0 s
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | . initial setup = 4 s
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | . payload setup = 6 s
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | . stage-in = 0 s
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | . payload execution = 3144 s
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | . stage-out = 0 s
[2026-03-25 17:07:47] 2026-03-25 16:07:14,749 | INFO     | . log creation = 0 s
[2026-03-25 17:07:47] 2026-03-25 16:07:14,750 | INFO     | ..............................
[2026-03-25 17:07:47] 2026-03-25 16:07:14,813 | INFO     | number of running child processes to parent process 325793: 1
[2026-03-25 17:07:47] 2026-03-25 16:07:14,814 | INFO     | maximum number of monitored processes: 6
[2026-03-25 17:07:47] 2026-03-25 16:07:14,814 | INFO     | aborting job monitoring since job object (job id=7063904882) has expired
[2026-03-25 17:07:47] 2026-03-25 16:07:14,886 | INFO     | 
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | job summary report
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | --------------------------------------------------
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | PanDA job id: 7063904882
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | task id: 49181568
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | errors: (none)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | pilot state: finished 
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | transexitcode: 0
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | exeerrorcode: 0
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | exeerrordiag: 
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | exitcode: 0
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | exitmsg: OK
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | cpuconsumptiontime: 34425 s
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | nevents: 400
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | neventsw: 0
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | pid: 325793
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | pgrp: 325793
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | corecount: 12
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | event service: False
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | sizes: {0: 2280332, 11: 2280332, 3154: 2314857, 3157: 2314857, 3160: 2315083}
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | --------------------------------------------------
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | 
[2026-03-25 17:07:47] 2026-03-25 16:07:14,887 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/1
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 17:07:47] 2026-03-25 16:07:14,903 | INFO     | job 7063904882 has completed (purged errors)
[2026-03-25 17:07:47] 2026-03-25 16:07:14,903 | INFO     | overall cleanup function is called
[2026-03-25 17:07:47] 2026-03-25 16:07:15,910 | INFO     | --- collectZombieJob: --- 10, [325793]
[2026-03-25 17:07:47] 2026-03-25 16:07:15,910 | INFO     | zombie collector waiting for pid 325793
[2026-03-25 17:07:47] 2026-03-25 16:07:15,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 17:07:47] 2026-03-25 16:07:15,910 | INFO     | collected zombie processes
[2026-03-25 17:07:47] 2026-03-25 16:07:15,910 | INFO     | will attempt to kill all subprocesses of pid=325793
[2026-03-25 17:07:47] 2026-03-25 16:07:16,217 | INFO     | process IDs to be killed: [325793] (in reverse order)
[2026-03-25 17:07:47] 2026-03-25 16:07:16,348 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 17:07:47] 2026-03-25 16:07:16,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 17:07:47] 2026-03-25 16:07:16,370 | INFO     | did not find any defunct processes belonging to 325793
[2026-03-25 17:07:47] 2026-03-25 16:07:16,390 | INFO     | did not find any defunct processes belonging to 325793
[2026-03-25 17:07:47] 2026-03-25 16:07:16,390 | INFO     | ready for new job
[2026-03-25 17:07:47] 2026-03-25 16:07:16,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 17:07:47] 2026-03-25 16:07:16,391 | INFO     | **************************************
[2026-03-25 17:07:47] 2026-03-25 16:07:16,391 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 17:07:47] 2026-03-25 16:07:16,391 | INFO     | **************************************
[2026-03-25 17:07:47] 2026-03-25 16:07:16,391 | INFO     | 
[2026-03-25 17:07:47] 2026-03-25 16:07:16,396 | INFO     | architecture information:
[2026-03-25 17:07:47] 2026-03-25 16:07:16,396 | INFO     | executing command: cat /etc/os-release
[2026-03-25 17:07:47] 2026-03-25 16:07:16,408 | INFO     | cat /etc/os-release:
[2026-03-25 17:07:47] NAME="CentOS Linux"
[2026-03-25 17:07:47] VERSION="7 (Core)"
[2026-03-25 17:07:47] ID="centos"
[2026-03-25 17:07:47] ID_LIKE="rhel fedora"
[2026-03-25 17:07:47] VERSION_ID="7"
[2026-03-25 17:07:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 17:07:47] ANSI_COLOR="0;31"
[2026-03-25 17:07:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 17:07:47] HOME_URL="https://www.centos.org/"
[2026-03-25 17:07:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 17:07:47] 
[2026-03-25 17:07:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 17:07:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 17:07:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 17:07:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 17:07:47] 
[2026-03-25 17:07:47] 2026-03-25 16:07:16,408 | INFO     | **************************************
[2026-03-25 17:07:47] 2026-03-25 16:07:16,910 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/1
[2026-03-25 17:07:47] 2026-03-25 16:07:16,921 | INFO     | sufficient remaining disk space (20407386112 B)
[2026-03-25 17:07:47] 2026-03-25 16:07:16,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 17:07:47] 2026-03-25 16:07:16,921 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 17:07:47] 2026-03-25 16:07:16,921 | INFO     | update_server=False
[2026-03-25 17:07:47] 2026-03-25 16:07:16,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 17:07:47] 2026-03-25 16:07:17,065 | INFO     | all payload control threads have been joined
[2026-03-25 17:07:47] 2026-03-25 16:07:17,235 | INFO     | all data control threads have been joined
[2026-03-25 17:07:47] 2026-03-25 16:07:17,316 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 17:07:47] 2026-03-25 16:07:17,316 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 17:07:47] 2026-03-25 16:07:17,316 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:07:47] 2026-03-25 16:07:17,316 | INFO     | will abort loop
[2026-03-25 17:07:47] 2026-03-25 16:07:17,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 17:07:47] 2026-03-25 16:07:17,528 | INFO     | all job control threads have been joined
[2026-03-25 17:07:47] 2026-03-25 16:07:17,926 | INFO     | [job] retrieve thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:17,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 17:07:47] 2026-03-25 16:07:18,070 | INFO     | [payload] control thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:18,239 | INFO     | [data] control thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:18,322 | INFO     | [job] job monitor thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:18,533 | INFO     | [job] control thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:18,812 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:18,886 | INFO     | [job] validate thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:18,927 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:18,957 | INFO     | [payload] failed_post thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:19,057 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:19,324 | INFO     | [data] copytool_in thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:19,384 | INFO     | [data] copytool_out thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:19,471 | INFO     | [payload] validate_post thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:19,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:07:47] 2026-03-25 16:07:20,811 | INFO     | [job] queue monitor thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:21,964 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:26,977 | INFO     | job.realtimelogging is not enabled
[2026-03-25 17:07:47] 2026-03-25 16:07:27,983 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 17:07:47] 2026-03-25 16:07:28,432 | INFO     | [monitor] cgroup control has ended
[2026-03-25 17:07:47] 2026-03-25 16:07:29,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23237941057344)>', '<ExcThread(monitor, started 23237699573504)>']
[2026-03-25 17:07:47] 2026-03-25 16:07:34,462 | INFO     | all workflow threads have been joined
[2026-03-25 17:07:47] 2026-03-25 16:07:34,462 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 17:07:47] 2026-03-25 16:07:34,462 | INFO     | traces error code: 0
[2026-03-25 17:07:47] 2026-03-25 16:07:34,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 17:07:47] 2026-03-25 16:07:47,050 | INFO     | PID=320033 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-25 17:07:47] 2026-03-25 16:07:47,051 | INFO     | .. there are 8 such processes running
[2026-03-25 17:07:47] 2026-03-25 16:07:47,051 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 17:07:47] 2026-03-25 16:07:47,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 17:07:47] 2026-03-25 16:07:47,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 17:07:47] 2026-03-25 16:07:47,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 17:07:47] 2026-03-25 16:07:47,051 | INFO     | [monitor] control thread has ended
[2026-03-25 17:07:47] 2026-03-25 16:07:47,180 [wrapper] ==== pilot stdout END ====
[2026-03-25 17:07:47] 2026-03-25 16:07:47,182 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 17:07:47] 2026-03-25 16:07:47,184 [wrapper] pilotpid: 320033
[2026-03-25 17:07:47] 2026-03-25 16:07:47,189 [wrapper] Pilot exit status: 0
[2026-03-25 17:07:47] 2026-03-25 16:07:47,195 [wrapper] pandaids: 7063904882
[2026-03-25 17:07:47] 2026-03-25 16:07:47,290 [wrapper] cleanup supervisor_pilot  515759 320034
[2026-03-25 17:07:47] 2026-03-25 16:07:47,291 [wrapper] Test setup, not cleaning
[2026-03-25 17:07:47] 2026-03-25 16:07:47,293 [wrapper] apfmon messages muted
[2026-03-25 17:07:47] 2026-03-25 16:07:47,294 [wrapper] ==== wrapper stdout END ====
[2026-03-25 17:07:47] 2026-03-25 16:07:47,295 [wrapper] ==== wrapper stderr END ====
[2026-03-25 17:07:47]  *** Error codes and diagnostics ***
[2026-03-25 17:07:47]     "exeErrorCode": 0,
[2026-03-25 17:07:47]     "exeErrorDiag": "",
[2026-03-25 17:07:47]     "pilotErrorCode": 0,
[2026-03-25 17:07:47]     "pilotErrorDiag": "",
[2026-03-25 17:07:47]  *** Listing of results directory ***
[2026-03-25 17:07:47] total 459516
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc    585013 Mar 25 05:29 pilot3.tar.gz
[2026-03-25 17:07:47] -rwx------. 1 boinc boinc     36322 Mar 25 05:29 runpilot2-wrapper.sh
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc      5111 Mar 25 05:29 queuedata.json
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc       100 Mar 25 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 17:07:47] -rwxr-xr-x. 1 boinc boinc      7986 Mar 25 16:14 run_atlas
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc       105 Mar 25 16:14 job.xml
[2026-03-25 17:07:47] -rw-r--r--. 2 boinc boinc     15845 Mar 25 16:14 start_atlas.sh
[2026-03-25 17:07:47] drwxrwx--x. 2 boinc boinc      4096 Mar 25 16:14 shared
[2026-03-25 17:07:47] -rw-r--r--. 2 boinc boinc    597538 Mar 25 16:14 input.tar.gz
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc      6711 Mar 25 16:14 init_data.xml
[2026-03-25 17:07:47] -rw-r--r--. 2 boinc boinc 236867501 Mar 25 16:14 EVNT.49135330._000005.pool.root.1
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc         0 Mar 25 16:14 boinc_lockfile
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc      2629 Mar 25 16:14 pandaJob.out
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc   1011905 Mar 25 16:14 agis_schedconf.cvmfs.json
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc   1511579 Mar 25 16:14 agis_ddmendpoints.agis.ALL.json
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc       445 Mar 25 16:14 workernode_map.json
[2026-03-25 17:07:47] drwx------. 5 boinc boinc      4096 Mar 25 16:14 pilot3
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc 228010020 Mar 25 17:06 HITS.49181568._000124.pool.root.1
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc       530 Mar 25 17:06 boinc_task_state.xml
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc      1042 Mar 25 17:07 memory_monitor_summary.json
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc    380143 Mar 25 17:07 log.49181568._000124.job.log.tgz.1
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc      6352 Mar 25 17:07 heartbeat.json
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc      8192 Mar 25 17:07 boinc_mmap_file
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc        27 Mar 25 17:07 wrapper_checkpoint.txt
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc       821 Mar 25 17:07 pilotlog.txt
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc        95 Mar 25 17:07 pilot_heartbeat.json
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc    486853 Mar 25 17:07 log.49181568._000124.job.log.1
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc       357 Mar 25 17:07 output.list
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc       620 Mar 25 17:07 runtime_log
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc    880640 Mar 25 17:07 result.tar.gz
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc      9223 Mar 25 17:07 runtime_log.err
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc       662 Mar 25 17:07 rqgKDm62UP9n9Rq4apOajLDm4fhM0noT9bVoINGKDmqdFKDmPyM5jn.diag
[2026-03-25 17:07:47] -rw-r--r--. 1 boinc boinc     21659 Mar 25 17:07 stderr.txt
[2026-03-25 17:07:47] HITS file was successfully produced:
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc 228010020 Mar 25 17:06 shared/HITS.pool.root.1
[2026-03-25 17:07:47]  *** Contents of shared directory: ***
[2026-03-25 17:07:47] total 455452
[2026-03-25 17:07:47] -rw-r--r--. 2 boinc boinc     15845 Mar 25 16:14 start_atlas.sh
[2026-03-25 17:07:47] -rw-r--r--. 2 boinc boinc    597538 Mar 25 16:14 input.tar.gz
[2026-03-25 17:07:47] -rw-r--r--. 2 boinc boinc 236867501 Mar 25 16:14 ATLAS.root_0
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc 228010020 Mar 25 17:06 HITS.pool.root.1
[2026-03-25 17:07:47] -rw-------. 1 boinc boinc    880640 Mar 25 17:07 result.tar.gz
17:07:48 (315218): run_atlas exited; CPU time 34527.414017
17:07:48 (315218): called boinc_finish(0)

</stderr_txt>
]]>

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