Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:07:31 (2776): wrapper (7.7.26015): starting
05:07:31 (2776): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 05:07:31] Arguments: --nthreads 8
[2026-03-25 05:07:31] Threads: 8
[2026-03-25 05:07:31] Checking for CVMFS
[2026-03-25 05:07:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 05:07:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 05:07:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 05:07:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 05:07:34] 2.11.0.0 5625 29859 83976 157668 0 188 2140277 4096001 3659 130560 1 6043416 99.822 1889954 270 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 05:07:34] CVMFS is ok
[2026-03-25 05:07:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 05:07:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 05:07:34] Further information can be found at the LHC@home message board.
[2026-03-25 05:07:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 05:07:34] Checking for apptainer binary...
[2026-03-25 05:07:34] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 05:07:34] apptainer is not installed, using version from CVMFS
[2026-03-25 05:07:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 05:07:35] WARNING: Environment variable TMPDIR already has value [/tmp/job_11390055/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node051
[2026-03-25 05:07:35] apptainer works
[2026-03-25 05:07:35] Set ATHENA_PROC_NUMBER=8
[2026-03-25 05:07:35] Set ATHENA_CORE_NUMBER=8
[2026-03-25 05:07:35] Starting ATLAS job with PandaID=7056930883
[2026-03-25 05:07:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11390055/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 07:13:59]  *** The last 200 lines of the pilot log: ***
[2026-03-25 07:13:59] 2026-03-25 06:13:03,051 | INFO     | job 7056930883 has finished - writing final server update
[2026-03-25 07:13:59] 2026-03-25 06:13:03,051 | INFO     | total number of processed events: 400 (read)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,070 | INFO     | using path: /tmp/job_11390055/atlas/pilot/slots/0/PanDA_Pilot-7056930883/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,070 | INFO     | extracted standard info from prmon json
[2026-03-25 07:13:59] 2026-03-25 06:13:03,070 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 07:13:59] 2026-03-25 06:13:03,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 07:13:59] 2026-03-25 06:13:03,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 07:13:59] 2026-03-25 06:13:03,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 07:13:59] 2026-03-25 06:13:03,071 | INFO     | fitting pss+swap vs Time
[2026-03-25 07:13:59] 2026-03-25 06:13:03,072 | INFO     | sum of square deviations: 576985702.0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,072 | INFO     | sum of deviations: 17688946042.000004
[2026-03-25 07:13:59] 2026-03-25 06:13:03,072 | INFO     | mean x: 1774415400.0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,072 | INFO     | mean y: 2488864.9918699185
[2026-03-25 07:13:59] 2026-03-25 06:13:03,072 | INFO     | intersect: -54396672427.7326
[2026-03-25 07:13:59] 2026-03-25 06:13:03,072 | INFO     | chi2: 1.1419806377879531
[2026-03-25 07:13:59] 2026-03-25 06:13:03,072 | INFO     | sum of square deviations: 509440249.5
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | sum of deviations: 16527763767.0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | mean x: 1774415247.5
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | mean y: 2486246.5423728814
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | intersect: -57564845867.530876
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | chi2: 1.1433843493175622
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | current chi2=1.1433843493175622 (change=-0.12291903060003535 %)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | right removable region: 117
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | sum of square deviations: 509440249.5
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | sum of deviations: 3110680817.500001
[2026-03-25 07:13:59] 2026-03-25 06:13:03,073 | INFO     | mean x: 1774415552.5
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | mean y: 2521061.0423728814
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | intersect: -10832194937.257278
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | chi2: 0.0009049156023160326
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | current chi2=0.0009049156023160326 (change=99.92075911163705 %)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | sum of square deviations: 447383272.0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | sum of deviations: 2847834348.9999995
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | mean x: 1774415705.0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | mean y: 2521722.7699115044
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | intersect: -11292585426.66336
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | chi2: 0.00047670136821778856
[2026-03-25 07:13:59] 2026-03-25 06:13:03,074 | INFO     | current chi2=0.00047670136821778856 (change=47.32090296622983 %)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | sum of square deviations: 390582207.0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | sum of deviations: 2418995687.0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | mean x: 1774415857.5
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | mean y: 2522872.796296296
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | intersect: -10986980052.094767
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | chi2: 0.0004605711533277817
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | current chi2=0.0004605711533277817 (change=3.3837148297500876 %)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | left removable region: 30
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | sum of square deviations: 204163828.0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | sum of deviations: 987102670.9999999
[2026-03-25 07:13:59] 2026-03-25 06:13:03,075 | INFO     | mean x: 1774416132.0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | mean y: 2524579.896551724
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | intersect: -8576521573.973018
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | chi2: 0.0002791634842434361
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | current memory leak: 4.83 B/s (using 87 data points, chi2=0.00)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | could have reported an average CPU frequency of 2755 MHz (8 samples)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | ..............................
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | . Timing measurements:
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | . get job = 0 s
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | . initial setup = 2 s
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | . payload setup = 3 s
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | . stage-in = 0 s
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | . payload execution = 7497 s
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | . stage-out = 0 s
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | . log creation = 0 s
[2026-03-25 07:13:59] 2026-03-25 06:13:03,076 | INFO     | ..............................
[2026-03-25 07:13:59] 2026-03-25 06:13:03,123 | INFO     | 
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | job summary report
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | --------------------------------------------------
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | PanDA job id: 7056930883
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | task id: 49177958
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | errors: (none)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | pilot state: finished 
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | transexitcode: 0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | exeerrorcode: 0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | exeerrordiag: 
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | exitcode: 0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | exitmsg: OK
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | cpuconsumptiontime: 55630 s
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | nevents: 400
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | neventsw: 0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | pid: 19586
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | pgrp: 19586
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | corecount: 8
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | event service: False
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | sizes: {0: 2279828, 1: 2280456, 11: 2280456, 7505: 2308050, 7507: 2317078, 7510: 2317456}
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | --------------------------------------------------
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | 
[2026-03-25 07:13:59] 2026-03-25 06:13:03,124 | INFO     | executing command: ls -lF /tmp/job_11390055/atlas/pilot/slots/0
[2026-03-25 07:13:59] 2026-03-25 06:13:03,134 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,134 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,134 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | job 7056930883 has completed (purged errors)
[2026-03-25 07:13:59] 2026-03-25 06:13:03,135 | INFO     | overall cleanup function is called
[2026-03-25 07:13:59] 2026-03-25 06:13:03,190 | INFO     | PID=7964 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-25 07:13:59] 2026-03-25 06:13:03,190 | INFO     | .. there are 2 such processes running
[2026-03-25 07:13:59] 2026-03-25 06:13:04,141 | INFO     | --- collectZombieJob: --- 10, [19586]
[2026-03-25 07:13:59] 2026-03-25 06:13:04,142 | INFO     | zombie collector waiting for pid 19586
[2026-03-25 07:13:59] 2026-03-25 06:13:04,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 07:13:59] 2026-03-25 06:13:04,142 | INFO     | collected zombie processes
[2026-03-25 07:13:59] 2026-03-25 06:13:04,142 | INFO     | will attempt to kill all subprocesses of pid=19586
[2026-03-25 07:13:59] 2026-03-25 06:13:04,239 | INFO     | process IDs to be killed: [19586] (in reverse order)
[2026-03-25 07:13:59] 2026-03-25 06:13:04,272 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 07:13:59] 2026-03-25 06:13:04,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 07:13:59] 2026-03-25 06:13:04,275 | INFO     | did not find any defunct processes belonging to 19586
[2026-03-25 07:13:59] 2026-03-25 06:13:04,278 | INFO     | did not find any defunct processes belonging to 19586
[2026-03-25 07:13:59] 2026-03-25 06:13:04,278 | INFO     | ready for new job
[2026-03-25 07:13:59] 2026-03-25 06:13:04,278 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 07:13:59] 2026-03-25 06:13:04,279 | INFO     | **************************************
[2026-03-25 07:13:59] 2026-03-25 06:13:04,279 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 07:13:59] 2026-03-25 06:13:04,279 | INFO     | **************************************
[2026-03-25 07:13:59] 2026-03-25 06:13:04,279 | INFO     | 
[2026-03-25 07:13:59] 2026-03-25 06:13:04,293 | INFO     | architecture information:
[2026-03-25 07:13:59] 2026-03-25 06:13:04,293 | INFO     | executing command: cat /etc/os-release
[2026-03-25 07:13:59] 2026-03-25 06:13:04,299 | INFO     | cat /etc/os-release:
[2026-03-25 07:13:59] NAME="CentOS Linux"
[2026-03-25 07:13:59] VERSION="7 (Core)"
[2026-03-25 07:13:59] ID="centos"
[2026-03-25 07:13:59] ID_LIKE="rhel fedora"
[2026-03-25 07:13:59] VERSION_ID="7"
[2026-03-25 07:13:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 07:13:59] ANSI_COLOR="0;31"
[2026-03-25 07:13:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 07:13:59] HOME_URL="https://www.centos.org/"
[2026-03-25 07:13:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 07:13:59] 
[2026-03-25 07:13:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 07:13:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 07:13:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 07:13:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 07:13:59] 
[2026-03-25 07:13:59] 2026-03-25 06:13:04,300 | INFO     | **************************************
[2026-03-25 07:13:59] 2026-03-25 06:13:04,802 | INFO     | executing command: df -mP /tmp/job_11390055/atlas/pilot/slots/0
[2026-03-25 07:13:59] 2026-03-25 06:13:04,808 | INFO     | sufficient remaining disk space (228112465920 B)
[2026-03-25 07:13:59] 2026-03-25 06:13:04,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 07:13:59] 2026-03-25 06:13:04,808 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 07:13:59] 2026-03-25 06:13:04,808 | INFO     | update_server=False
[2026-03-25 07:13:59] 2026-03-25 06:13:04,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 07:13:59] 2026-03-25 06:13:04,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 07:13:59] 2026-03-25 06:13:04,808 | INFO     | aborting loop
[2026-03-25 07:13:59] 2026-03-25 06:13:04,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 07:13:59] 2026-03-25 06:13:04,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 07:13:59] 2026-03-25 06:13:05,125 | INFO     | all data control threads have been joined
[2026-03-25 07:13:59] 2026-03-25 06:13:05,205 | INFO     | all payload control threads have been joined
[2026-03-25 07:13:59] 2026-03-25 06:13:05,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 07:13:59] 2026-03-25 06:13:05,758 | INFO     | all job control threads have been joined
[2026-03-25 07:13:59] 2026-03-25 06:13:05,813 | INFO     | [job] retrieve thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:05,813 | INFO     | [job] queue monitor thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:05,814 | INFO     | [job] job monitor thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,130 | INFO     | [data] control thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,142 | INFO     | [job] validate thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,210 | INFO     | [payload] control thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,274 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,336 | INFO     | [payload] failed_post thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,476 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,488 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,500 | INFO     | [data] copytool_in thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,764 | INFO     | [job] control thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:06,861 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:07,017 | INFO     | [payload] validate_post thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:07,267 | INFO     | [data] copytool_out thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:08,814 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 07:13:59] 2026-03-25 06:13:35,375 | INFO     | PID=7964 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-25 07:13:59] 2026-03-25 06:13:35,375 | INFO     | .. there are 2 such processes running
[2026-03-25 07:13:59] 2026-03-25 06:13:35,375 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 07:13:59] 2026-03-25 06:13:35,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 07:13:59] 2026-03-25 06:13:35,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 07:13:59] 2026-03-25 06:13:54,239 | INFO     | [monitor] cgroup control has ended
[2026-03-25 07:13:59] 2026-03-25 06:13:54,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456056887040)>']
[2026-03-25 07:13:59] 2026-03-25 06:13:54,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 07:13:59] 2026-03-25 06:13:54,471 | INFO     | [monitor] control thread has ended
[2026-03-25 07:13:59] 2026-03-25 06:13:59,277 | INFO     | all workflow threads have been joined
[2026-03-25 07:13:59] 2026-03-25 06:13:59,277 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 07:13:59] 2026-03-25 06:13:59,277 | INFO     | traces error code: 0
[2026-03-25 07:13:59] 2026-03-25 06:13:59,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 07:13:59] 2026-03-25 06:13:59,329 [wrapper] ==== pilot stdout END ====
[2026-03-25 07:13:59] 2026-03-25 06:13:59,331 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 07:13:59] 2026-03-25 06:13:59,332 [wrapper] pilotpid: 7964
[2026-03-25 07:13:59] 2026-03-25 06:13:59,333 [wrapper] Pilot exit status: 0
[2026-03-25 07:13:59] 2026-03-25 06:13:59,337 [wrapper] pandaids: 7056930883
[2026-03-25 07:13:59] 2026-03-25 06:13:59,361 [wrapper] cleanup supervisor_pilot 17445 7965
[2026-03-25 07:13:59] 2026-03-25 06:13:59,362 [wrapper] Test setup, not cleaning
[2026-03-25 07:13:59] 2026-03-25 06:13:59,363 [wrapper] apfmon messages muted
[2026-03-25 07:13:59] 2026-03-25 06:13:59,364 [wrapper] ==== wrapper stdout END ====
[2026-03-25 07:13:59] 2026-03-25 06:13:59,365 [wrapper] ==== wrapper stderr END ====
[2026-03-25 07:13:59]  *** Error codes and diagnostics ***
[2026-03-25 07:13:59]     "exeErrorCode": 0,
[2026-03-25 07:13:59]     "exeErrorDiag": "",
[2026-03-25 07:13:59]     "pilotErrorCode": 0,
[2026-03-25 07:13:59]     "pilotErrorDiag": "",
[2026-03-25 07:13:59]  *** Listing of results directory ***
[2026-03-25 07:13:59] total 461948
[2026-03-25 07:13:59] -rwx------ 1 mf493845 unix-user     36322 Mar 22 05:28 runpilot2-wrapper.sh
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user    585013 Mar 24 00:08 pilot3.tar.gz
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user      5111 Mar 24 00:10 queuedata.json
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user       100 Mar 25 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 07:13:59] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 04:06 run_atlas
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user       105 Mar 25 04:06 job.xml
[2026-03-25 07:13:59] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 05:07 start_atlas.sh
[2026-03-25 07:13:59] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 05:07 shared
[2026-03-25 07:13:59] -rw-r--r-- 2 mf493845 unix-user    597546 Mar 25 05:07 input.tar.gz
[2026-03-25 07:13:59] -rw-r--r-- 2 mf493845 unix-user 240253083 Mar 25 05:07 EVNT.49127744._000002.pool.root.1
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user         0 Mar 25 05:07 boinc_setup_complete
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user      6390 Mar 25 05:07 init_data.xml
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user      8192 Mar 25 05:07 boinc_mmap_file
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user         0 Mar 25 05:07 boinc_lockfile
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user      2615 Mar 25 05:07 pandaJob.out
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user   1010836 Mar 25 05:07 agis_schedconf.cvmfs.json
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user   1511579 Mar 25 05:07 agis_ddmendpoints.agis.ALL.json
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user       420 Mar 25 05:07 workernode_map.json
[2026-03-25 07:13:59] drwx------ 5 mf493845 unix-user       440 Mar 25 05:07 pilot3
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user 225926897 Mar 25 07:12 HITS.49177958._000038.pool.root.1
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user      1016 Mar 25 07:12 memory_monitor_summary.json
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user    366026 Mar 25 07:12 log.49177958._000038.job.log.tgz.1
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user      6299 Mar 25 07:13 heartbeat.json
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user        95 Mar 25 07:13 pilot_heartbeat.json
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user      4830 Mar 25 07:13 pilotlog.txt
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user   1106297 Mar 25 07:13 log.49177958._000038.job.log.1
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user       357 Mar 25 07:13 output.list
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user       620 Mar 25 07:13 runtime_log
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user   1484800 Mar 25 07:13 result.tar.gz
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user      9219 Mar 25 07:13 runtime_log.err
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user       643 Mar 25 07:13 C8xLDmvbPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDmBb0LDmoezFPm.diag
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user     21609 Mar 25 07:13 stderr.txt
[2026-03-25 07:13:59] HITS file was successfully produced:
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user 225926897 Mar 25 07:12 shared/HITS.pool.root.1
[2026-03-25 07:13:59]  *** Contents of shared directory: ***
[2026-03-25 07:13:59] total 457308
[2026-03-25 07:13:59] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 05:07 start_atlas.sh
[2026-03-25 07:13:59] -rw-r--r-- 2 mf493845 unix-user    597546 Mar 25 05:07 input.tar.gz
[2026-03-25 07:13:59] -rw-r--r-- 2 mf493845 unix-user 240253083 Mar 25 05:07 ATLAS.root_0
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user 225926897 Mar 25 07:12 HITS.pool.root.1
[2026-03-25 07:13:59] -rw------- 1 mf493845 unix-user   1484800 Mar 25 07:13 result.tar.gz
07:14:01 (2776): run_atlas exited; CPU time 55746.842909
07:14:01 (2776): called boinc_finish(0)

</stderr_txt>
]]>

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