Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:29:13 (8556): wrapper (7.7.26015): starting
03:29:13 (8556): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 03:29:13] Arguments: --nthreads 8
[2026-03-25 03:29:13] Threads: 8
[2026-03-25 03:29:13] Checking for CVMFS
[2026-03-25 03:29:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 03:29:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 03:29:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 03:29:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 03:29:13] 2.11.0.0 5754 29752 70680 157666 0 1 2735199 4096001 0 130560 1 4748505 99.839 1865586 274 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 03:29:13] CVMFS is ok
[2026-03-25 03:29:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 03:29:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 03:29:13] Further information can be found at the LHC@home message board.
[2026-03-25 03:29:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 03:29:13] Checking for apptainer binary...
[2026-03-25 03:29:13] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 03:29:13] apptainer is not installed, using version from CVMFS
[2026-03-25 03:29:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 03:29:13] WARNING: Environment variable TMPDIR already has value [/tmp/job_11389679/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node054
[2026-03-25 03:29:13] apptainer works
[2026-03-25 03:29:13] Set ATHENA_PROC_NUMBER=8
[2026-03-25 03:29:13] Set ATHENA_CORE_NUMBER=8
[2026-03-25 03:29:13] Starting ATLAS job with PandaID=7056911378
[2026-03-25 03:29:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11389679/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 05:26:40]  *** The last 200 lines of the pilot log: ***
[2026-03-25 05:26:40] 2026-03-25 04:26:07,762 | INFO     | reading metadata from: /tmp/job_11389679/atlas/pilot/slots/0/PanDA_Pilot-7056911378/jobReport.json
[2026-03-25 05:26:40] 2026-03-25 04:26:07,763 | INFO     | added worker_node to metadata from /tmp/job_11389679/atlas/pilot/slots/0/workernode_map.json
[2026-03-25 05:26:40] 2026-03-25 04:26:07,764 | INFO     | this job has now completed (state=finished)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,764 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,764 | INFO     | log transfer has been attempted: DONE
[2026-03-25 05:26:40] 2026-03-25 04:26:07,764 | INFO     | job 7056911378 has finished - writing final server update
[2026-03-25 05:26:40] 2026-03-25 04:26:07,764 | INFO     | total number of processed events: 400 (read)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,793 | INFO     | using path: /tmp/job_11389679/atlas/pilot/slots/0/PanDA_Pilot-7056911378/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,793 | INFO     | extracted standard info from prmon json
[2026-03-25 05:26:40] 2026-03-25 04:26:07,793 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 05:26:40] 2026-03-25 04:26:07,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 05:26:40] 2026-03-25 04:26:07,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 05:26:40] 2026-03-25 04:26:07,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 05:26:40] 2026-03-25 04:26:07,795 | INFO     | fitting pss+swap vs Time
[2026-03-25 05:26:40] 2026-03-25 04:26:07,795 | INFO     | sum of square deviations: 471562330.0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,795 | INFO     | sum of deviations: -5839191388.999999
[2026-03-25 05:26:40] 2026-03-25 04:26:07,795 | INFO     | mean x: 1774409254.0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,795 | INFO     | mean y: 2584788.3391304347
[2026-03-25 05:26:40] 2026-03-25 04:26:07,795 | INFO     | intersect: 21974473926.554882
[2026-03-25 05:26:40] 2026-03-25 04:26:07,795 | INFO     | chi2: 1.147416788729696
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | sum of square deviations: 412686807.5
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | sum of deviations: -5096403051.000002
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | mean x: 1774409101.5
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | mean y: 2586713.8545454545
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | intersect: 21915339421.86732
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | chi2: 1.1474757822298767
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | current chi2=1.1474757822298767 (change=-0.005141418598728496 %)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | right removable region: 109
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | sum of square deviations: 412686807.5
[2026-03-25 05:26:40] 2026-03-25 04:26:07,796 | INFO     | sum of deviations: -16655665883.0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | mean x: 1774409406.5
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | mean y: 2611927.890909091
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | intersect: 71616168933.38431
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | chi2: 0.05256666052275177
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | current chi2=0.05256666052275177 (change=95.41869519087757 %)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | sum of square deviations: 358927660.0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | sum of deviations: -14872403656.0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | mean x: 1774409559.0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | mean y: 2606849.4857142856
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | intersect: 73526433941.8668
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | chi2: 0.051998212764337026
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | current chi2=0.051998212764337026 (change=1.0813845748651016 %)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,797 | INFO     | left removable region: 20
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | sum of square deviations: 218571540.0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | sum of deviations: -9581829919.0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | mean x: 1774409681.0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | mean y: 2595660.3258426967
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | intersect: 77789903971.22966
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | chi2: 0.04744687731929743
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | current memory leak: -43.84 B/s (using 89 data points, chi2=0.05)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | could have reported an average CPU frequency of 2365 MHz (7 samples)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | ..............................
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | . Timing measurements:
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | . get job = 0 s
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | . initial setup = 2 s
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | . payload setup = 3 s
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | . stage-in = 0 s
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | . payload execution = 6985 s
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | . stage-out = 0 s
[2026-03-25 05:26:40] 2026-03-25 04:26:07,798 | INFO     | . log creation = 0 s
[2026-03-25 05:26:40] 2026-03-25 04:26:07,799 | INFO     | ..............................
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | 
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | job summary report
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | --------------------------------------------------
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | PanDA job id: 7056911378
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | task id: 49177032
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | errors: (none)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | pilot state: finished 
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | transexitcode: 0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | exeerrorcode: 0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | exeerrordiag: 
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | exitcode: 0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | exitmsg: OK
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | cpuconsumptiontime: 52057 s
[2026-03-25 05:26:40] 2026-03-25 04:26:07,844 | INFO     | nevents: 400
[2026-03-25 05:26:40] 2026-03-25 04:26:07,845 | INFO     | neventsw: 0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,845 | INFO     | pid: 19043
[2026-03-25 05:26:40] 2026-03-25 04:26:07,845 | INFO     | pgrp: 19043
[2026-03-25 05:26:40] 2026-03-25 04:26:07,845 | INFO     | corecount: 8
[2026-03-25 05:26:40] 2026-03-25 04:26:07,845 | INFO     | event service: False
[2026-03-25 05:26:40] 2026-03-25 04:26:07,845 | INFO     | sizes: {0: 2280439, 11: 2280439, 6992: 2307865, 6993: 2316893, 6996: 2317143}
[2026-03-25 05:26:40] 2026-03-25 04:26:07,845 | INFO     | --------------------------------------------------
[2026-03-25 05:26:40] 2026-03-25 04:26:07,845 | INFO     | 
[2026-03-25 05:26:40] 2026-03-25 04:26:07,845 | INFO     | executing command: ls -lF /tmp/job_11389679/atlas/pilot/slots/0
[2026-03-25 05:26:40] 2026-03-25 04:26:07,853 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,853 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,853 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,853 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | job 7056911378 has completed (purged errors)
[2026-03-25 05:26:40] 2026-03-25 04:26:07,854 | INFO     | overall cleanup function is called
[2026-03-25 05:26:40] 2026-03-25 04:26:08,860 | INFO     | --- collectZombieJob: --- 10, [19043]
[2026-03-25 05:26:40] 2026-03-25 04:26:08,860 | INFO     | zombie collector waiting for pid 19043
[2026-03-25 05:26:40] 2026-03-25 04:26:08,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 05:26:40] 2026-03-25 04:26:08,860 | INFO     | collected zombie processes
[2026-03-25 05:26:40] 2026-03-25 04:26:08,860 | INFO     | will attempt to kill all subprocesses of pid=19043
[2026-03-25 05:26:40] 2026-03-25 04:26:08,973 | INFO     | process IDs to be killed: [19043] (in reverse order)
[2026-03-25 05:26:40] 2026-03-25 04:26:09,013 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 05:26:40] 2026-03-25 04:26:09,013 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 05:26:40] 2026-03-25 04:26:09,017 | INFO     | did not find any defunct processes belonging to 19043
[2026-03-25 05:26:40] 2026-03-25 04:26:09,020 | INFO     | did not find any defunct processes belonging to 19043
[2026-03-25 05:26:40] 2026-03-25 04:26:09,020 | INFO     | ready for new job
[2026-03-25 05:26:40] 2026-03-25 04:26:09,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 05:26:40] 2026-03-25 04:26:09,021 | INFO     | **************************************
[2026-03-25 05:26:40] 2026-03-25 04:26:09,021 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 05:26:40] 2026-03-25 04:26:09,021 | INFO     | **************************************
[2026-03-25 05:26:40] 2026-03-25 04:26:09,021 | INFO     | 
[2026-03-25 05:26:40] 2026-03-25 04:26:09,034 | INFO     | architecture information:
[2026-03-25 05:26:40] 2026-03-25 04:26:09,034 | INFO     | executing command: cat /etc/os-release
[2026-03-25 05:26:40] 2026-03-25 04:26:09,040 | INFO     | cat /etc/os-release:
[2026-03-25 05:26:40] NAME="CentOS Linux"
[2026-03-25 05:26:40] VERSION="7 (Core)"
[2026-03-25 05:26:40] ID="centos"
[2026-03-25 05:26:40] ID_LIKE="rhel fedora"
[2026-03-25 05:26:40] VERSION_ID="7"
[2026-03-25 05:26:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 05:26:40] ANSI_COLOR="0;31"
[2026-03-25 05:26:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 05:26:40] HOME_URL="https://www.centos.org/"
[2026-03-25 05:26:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 05:26:40] 
[2026-03-25 05:26:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 05:26:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 05:26:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 05:26:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 05:26:40] 
[2026-03-25 05:26:40] 2026-03-25 04:26:09,040 | INFO     | **************************************
[2026-03-25 05:26:40] 2026-03-25 04:26:09,543 | INFO     | executing command: df -mP /tmp/job_11389679/atlas/pilot/slots/0
[2026-03-25 05:26:40] 2026-03-25 04:26:09,550 | INFO     | sufficient remaining disk space (224231686144 B)
[2026-03-25 05:26:40] 2026-03-25 04:26:09,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 05:26:40] 2026-03-25 04:26:09,550 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 05:26:40] 2026-03-25 04:26:09,550 | INFO     | update_server=False
[2026-03-25 05:26:40] 2026-03-25 04:26:09,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 05:26:40] 2026-03-25 04:26:09,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:26:40] 2026-03-25 04:26:09,550 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 05:26:40] 2026-03-25 04:26:09,593 | INFO     | all payload control threads have been joined
[2026-03-25 05:26:40] 2026-03-25 04:26:09,787 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 05:26:40] 2026-03-25 04:26:09,787 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 05:26:40] 2026-03-25 04:26:09,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:26:40] 2026-03-25 04:26:09,787 | INFO     | will abort loop
[2026-03-25 05:26:40] 2026-03-25 04:26:10,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 05:26:40] 2026-03-25 04:26:10,276 | INFO     | all job control threads have been joined
[2026-03-25 05:26:40] 2026-03-25 04:26:10,555 | INFO     | [job] retrieve thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:10,555 | INFO     | [job] queue monitor thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:10,579 | INFO     | all data control threads have been joined
[2026-03-25 05:26:40] 2026-03-25 04:26:10,595 | INFO     | [payload] control thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:10,792 | INFO     | [job] job monitor thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:10,934 | INFO     | job.realtimelogging is not enabled
[2026-03-25 05:26:40] 2026-03-25 04:26:11,126 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:11,281 | INFO     | [job] control thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:11,485 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:11,486 | INFO     | [job] validate thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:11,567 | INFO     | [payload] validate_post thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:11,584 | INFO     | [data] control thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:11,644 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:11,769 | INFO     | [payload] failed_post thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:11,917 | INFO     | [data] copytool_in thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:11,939 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:12,154 | INFO     | [data] copytool_out thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:13,556 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 05:26:40] 2026-03-25 04:26:31,512 | INFO     | [monitor] cgroup control has ended
[2026-03-25 05:26:40] 2026-03-25 04:26:31,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-25 05:26:40] 2026-03-25 04:26:36,990 | INFO     | all workflow threads have been joined
[2026-03-25 05:26:40] 2026-03-25 04:26:36,990 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 05:26:40] 2026-03-25 04:26:36,990 | INFO     | traces error code: 0
[2026-03-25 05:26:40] 2026-03-25 04:26:36,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 05:26:40] 2026-03-25 04:26:40,192 | INFO     | PID=13519 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 05:26:40] 2026-03-25 04:26:40,192 | INFO     | .. there are 7 such processes running
[2026-03-25 05:26:40] 2026-03-25 04:26:40,192 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 05:26:40] 2026-03-25 04:26:40,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 05:26:40] 2026-03-25 04:26:40,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 05:26:40] 2026-03-25 04:26:40,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 05:26:40] 2026-03-25 04:26:40,193 | CRITICAL | thread 'MainThread' is not alive
[2026-03-25 05:26:40] 2026-03-25 04:26:40,193 | INFO     | [monitor] control thread has ended
[2026-03-25 05:26:40] 2026-03-25 04:26:40,246 [wrapper] ==== pilot stdout END ====
[2026-03-25 05:26:40] 2026-03-25 04:26:40,247 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 05:26:40] 2026-03-25 04:26:40,248 [wrapper] pilotpid: 13519
[2026-03-25 05:26:40] 2026-03-25 04:26:40,249 [wrapper] Pilot exit status: 0
[2026-03-25 05:26:40] 2026-03-25 04:26:40,252 [wrapper] pandaids: 7056911378
[2026-03-25 05:26:40] 2026-03-25 04:26:40,276 [wrapper] cleanup supervisor_pilot 30686 13520
[2026-03-25 05:26:40] 2026-03-25 04:26:40,277 [wrapper] Test setup, not cleaning
[2026-03-25 05:26:40] 2026-03-25 04:26:40,279 [wrapper] apfmon messages muted
[2026-03-25 05:26:40] 2026-03-25 04:26:40,280 [wrapper] ==== wrapper stdout END ====
[2026-03-25 05:26:40] 2026-03-25 04:26:40,281 [wrapper] ==== wrapper stderr END ====
[2026-03-25 05:26:40]  *** Error codes and diagnostics ***
[2026-03-25 05:26:40]     "exeErrorCode": 0,
[2026-03-25 05:26:40]     "exeErrorDiag": "",
[2026-03-25 05:26:40]     "pilotErrorCode": 0,
[2026-03-25 05:26:40]     "pilotErrorDiag": "",
[2026-03-25 05:26:40]  *** Listing of results directory ***
[2026-03-25 05:26:40] total 470064
[2026-03-25 05:26:40] -rwx------ 1 mf493845 unix-user     36322 Mar 22 05:28 runpilot2-wrapper.sh
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user    585013 Mar 23 23:57 pilot3.tar.gz
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user      5111 Mar 24 00:05 queuedata.json
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user       100 Mar 25 02:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 05:26:40] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 02:29 run_atlas
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user       105 Mar 25 02:29 job.xml
[2026-03-25 05:26:40] -rw-r--r-- 2 mf493845 unix-user 233777874 Mar 25 03:29 EVNT.49136164._000008.pool.root.1
[2026-03-25 05:26:40] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 03:29 start_atlas.sh
[2026-03-25 05:26:40] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 03:29 shared
[2026-03-25 05:26:40] -rw-r--r-- 2 mf493845 unix-user    597553 Mar 25 03:29 input.tar.gz
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user      6390 Mar 25 03:29 init_data.xml
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user         0 Mar 25 03:29 boinc_setup_complete
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user      8192 Mar 25 03:29 boinc_mmap_file
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user         0 Mar 25 03:29 boinc_lockfile
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user      2628 Mar 25 03:29 pandaJob.out
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user   1010836 Mar 25 03:29 agis_schedconf.cvmfs.json
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user   1511579 Mar 25 03:29 agis_ddmendpoints.agis.ALL.json
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user       420 Mar 25 03:29 workernode_map.json
[2026-03-25 05:26:40] drwx------ 5 mf493845 unix-user       440 Mar 25 03:29 pilot3
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user 240884278 Mar 25 05:25 HITS.49177032._000186.pool.root.1
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user        95 Mar 25 05:25 pilot_heartbeat.json
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user      1028 Mar 25 05:26 memory_monitor_summary.json
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user    357009 Mar 25 05:26 log.49177032._000186.job.log.tgz.1
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user      6307 Mar 25 05:26 heartbeat.json
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user       890 Mar 25 05:26 pilotlog.txt
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user   1030569 Mar 25 05:26 log.49177032._000186.job.log.1
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user       357 Mar 25 05:26 output.list
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user       620 Mar 25 05:26 runtime_log
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user   1402880 Mar 25 05:26 result.tar.gz
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user       646 Mar 25 05:26 VNgNDmWbPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDmKU0LDmnRO4kn.diag
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user      9219 Mar 25 05:26 runtime_log.err
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user     21663 Mar 25 05:26 stderr.txt
[2026-03-25 05:26:40] HITS file was successfully produced:
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user 240884278 Mar 25 05:25 shared/HITS.pool.root.1
[2026-03-25 05:26:40]  *** Contents of shared directory: ***
[2026-03-25 05:26:40] total 465512
[2026-03-25 05:26:40] -rw-r--r-- 2 mf493845 unix-user 233777874 Mar 25 03:29 ATLAS.root_0
[2026-03-25 05:26:40] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 03:29 start_atlas.sh
[2026-03-25 05:26:40] -rw-r--r-- 2 mf493845 unix-user    597553 Mar 25 03:29 input.tar.gz
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user 240884278 Mar 25 05:25 HITS.pool.root.1
[2026-03-25 05:26:40] -rw------- 1 mf493845 unix-user   1402880 Mar 25 05:26 result.tar.gz
05:26:41 (8556): run_atlas exited; CPU time 52163.403764
05:26:41 (8556): called boinc_finish(0)

</stderr_txt>
]]>

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