Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:27:41 (7657): wrapper (7.7.26015): starting
04:27:41 (7657): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 04:27:41] Arguments: --nthreads 8
[2026-03-25 04:27:41] Threads: 8
[2026-03-25 04:27:41] Checking for CVMFS
[2026-03-25 04:27:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 04:27:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 04:27:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 04:27:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 04:27:41] 2.11.0.0 4370 159521 90372 157668 2 188 2162643 4096001 1825 130560 1 8909085 99.647 8114014 320 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 04:27:41] CVMFS is ok
[2026-03-25 04:27:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 04:27:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 04:27:41] Further information can be found at the LHC@home message board.
[2026-03-25 04:27:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 04:27:41] Checking for apptainer binary...
[2026-03-25 04:27:41] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 04:27:41] apptainer is not installed, using version from CVMFS
[2026-03-25 04:27:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 04:27:41] WARNING: Environment variable TMPDIR already has value [/tmp/job_11389627/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node113
[2026-03-25 04:27:41] apptainer works
[2026-03-25 04:27:45] Set ATHENA_PROC_NUMBER=8
[2026-03-25 04:27:45] Set ATHENA_CORE_NUMBER=8
[2026-03-25 04:27:45] Starting ATLAS job with PandaID=7056980440
[2026-03-25 04:27:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11389627/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 06:23:09]  *** The last 200 lines of the pilot log: ***
[2026-03-25 06:23:09] 2026-03-25 05:22:47,546 | INFO     | log transfer has been attempted: DONE
[2026-03-25 06:23:09] 2026-03-25 05:22:47,546 | INFO     | job 7056980440 has finished - writing final server update
[2026-03-25 06:23:09] 2026-03-25 05:22:47,546 | INFO     | total number of processed events: 400 (read)
[2026-03-25 06:23:09] 2026-03-25 05:22:47,563 | INFO     | using path: /tmp/job_11389627/atlas/pilot/slots/0/PanDA_Pilot-7056980440/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 06:23:09] 2026-03-25 05:22:47,563 | INFO     | extracted standard info from prmon json
[2026-03-25 06:23:09] 2026-03-25 05:22:47,563 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 06:23:09] 2026-03-25 05:22:47,563 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 06:23:09] 2026-03-25 05:22:47,564 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 06:23:09] 2026-03-25 05:22:47,564 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 06:23:09] 2026-03-25 05:22:47,565 | INFO     | fitting pss+swap vs Time
[2026-03-25 06:23:09] 2026-03-25 05:22:47,565 | INFO     | sum of square deviations: 447383272.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,565 | INFO     | sum of deviations: 8219864009.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,565 | INFO     | mean x: 1774412705.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,565 | INFO     | mean y: 2536355.5840707966
[2026-03-25 06:23:09] 2026-03-25 05:22:47,565 | INFO     | intersect: -32599109802.839645
[2026-03-25 06:23:09] 2026-03-25 05:22:47,565 | INFO     | chi2: 1.1237669874692673
[2026-03-25 06:23:09] 2026-03-25 05:22:47,565 | INFO     | sum of square deviations: 390582207.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | sum of deviations: 8008568976.000001
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | mean x: 1774412552.5
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | mean y: 2535787.796296296
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | intersect: -36380343575.10431
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | chi2: 1.1254979556955045
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | current chi2=1.1254979556955045 (change=-0.15403266384745382 %)
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | right removable region: 107
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | sum of square deviations: 390582207.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | sum of deviations: -4334728015.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | mean x: 1774412857.5
[2026-03-25 06:23:09] 2026-03-25 05:22:47,566 | INFO     | mean y: 2569207.6481481483
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | intersect: 19695215174.957798
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | chi2: 0.00618079013283748
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | current chi2=0.00618079013283748 (change=99.44999361951746 %)
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | sum of square deviations: 338804492.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | sum of deviations: -4192635408.0000005
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | mean x: 1774413010.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | mean y: 2568772.0970873786
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | intersect: 21960562216.12102
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | chi2: 0.005434370013029294
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | current chi2=0.005434370013029294 (change=12.076451453068822 %)
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | left removable region: 20
[2026-03-25 06:23:09] 2026-03-25 05:22:47,567 | INFO     | sum of square deviations: 204163828.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | sum of deviations: -2683110437.0000005
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | mean x: 1774413132.0
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | mean y: 2565619.9195402297
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | intersect: 23321810956.655
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | chi2: 0.005069922971808978
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | current memory leak: -13.14 B/s (using 87 data points, chi2=0.01)
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | could have reported an average CPU frequency of 2505 MHz (7 samples)
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | ..............................
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | . Timing measurements:
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | . get job = 0 s
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | . initial setup = 2 s
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | . payload setup = 3 s
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | . stage-in = 0 s
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | . payload execution = 6875 s
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | . stage-out = 0 s
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | . log creation = 0 s
[2026-03-25 06:23:09] 2026-03-25 05:22:47,568 | INFO     | ..............................
[2026-03-25 06:23:09] 2026-03-25 05:22:47,712 | INFO     | time since job start (6895s) is within the limit (345600.0s)
[2026-03-25 06:23:09] 2026-03-25 05:22:48,012 | INFO     | 
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | job summary report
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | --------------------------------------------------
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | PanDA job id: 7056980440
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | task id: 49176327
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | errors: (none)
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | pilot state: finished 
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | transexitcode: 0
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | exeerrorcode: 0
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | exeerrordiag: 
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | exitcode: 0
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | exitmsg: OK
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | cpuconsumptiontime: 50669 s
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | nevents: 400
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | neventsw: 0
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | pid: 18766
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | pgrp: 18766
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | corecount: 8
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | event service: False
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | sizes: {0: 2280463, 11: 2280463, 6882: 2307837, 6883: 2316920, 6884: 2317058}
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | --------------------------------------------------
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | 
[2026-03-25 06:23:09] 2026-03-25 05:22:48,013 | INFO     | executing command: ls -lF /tmp/job_11389627/atlas/pilot/slots/0
[2026-03-25 06:23:09] 2026-03-25 05:22:48,022 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | job 7056980440 has completed (purged errors)
[2026-03-25 06:23:09] 2026-03-25 05:22:48,023 | INFO     | overall cleanup function is called
[2026-03-25 06:23:09] 2026-03-25 05:22:48,857 | INFO     | PID=12649 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 06:23:09] 2026-03-25 05:22:48,857 | INFO     | .. there are 7 such processes running
[2026-03-25 06:23:09] 2026-03-25 05:22:49,029 | INFO     | --- collectZombieJob: --- 10, [18766]
[2026-03-25 06:23:09] 2026-03-25 05:22:49,029 | INFO     | zombie collector waiting for pid 18766
[2026-03-25 06:23:09] 2026-03-25 05:22:49,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 06:23:09] 2026-03-25 05:22:49,029 | INFO     | collected zombie processes
[2026-03-25 06:23:09] 2026-03-25 05:22:49,030 | INFO     | will attempt to kill all subprocesses of pid=18766
[2026-03-25 06:23:09] 2026-03-25 05:22:49,138 | INFO     | process IDs to be killed: [18766] (in reverse order)
[2026-03-25 06:23:09] 2026-03-25 05:22:49,180 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 06:23:09] 2026-03-25 05:22:49,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 06:23:09] 2026-03-25 05:22:49,184 | INFO     | did not find any defunct processes belonging to 18766
[2026-03-25 06:23:09] 2026-03-25 05:22:49,188 | INFO     | did not find any defunct processes belonging to 18766
[2026-03-25 06:23:09] 2026-03-25 05:22:49,188 | INFO     | ready for new job
[2026-03-25 06:23:09] 2026-03-25 05:22:49,188 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 06:23:09] 2026-03-25 05:22:49,189 | INFO     | **************************************
[2026-03-25 06:23:09] 2026-03-25 05:22:49,189 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 06:23:09] 2026-03-25 05:22:49,189 | INFO     | **************************************
[2026-03-25 06:23:09] 2026-03-25 05:22:49,189 | INFO     | 
[2026-03-25 06:23:09] 2026-03-25 05:22:49,204 | INFO     | architecture information:
[2026-03-25 06:23:09] 2026-03-25 05:22:49,204 | INFO     | executing command: cat /etc/os-release
[2026-03-25 06:23:09] 2026-03-25 05:22:49,210 | INFO     | cat /etc/os-release:
[2026-03-25 06:23:09] NAME="CentOS Linux"
[2026-03-25 06:23:09] VERSION="7 (Core)"
[2026-03-25 06:23:09] ID="centos"
[2026-03-25 06:23:09] ID_LIKE="rhel fedora"
[2026-03-25 06:23:09] VERSION_ID="7"
[2026-03-25 06:23:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 06:23:09] ANSI_COLOR="0;31"
[2026-03-25 06:23:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 06:23:09] HOME_URL="https://www.centos.org/"
[2026-03-25 06:23:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 06:23:09] 
[2026-03-25 06:23:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 06:23:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 06:23:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 06:23:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 06:23:09] 
[2026-03-25 06:23:09] 2026-03-25 05:22:49,210 | INFO     | **************************************
[2026-03-25 06:23:09] 2026-03-25 05:22:49,713 | INFO     | executing command: df -mP /tmp/job_11389627/atlas/pilot/slots/0
[2026-03-25 06:23:09] 2026-03-25 05:22:49,719 | INFO     | sufficient remaining disk space (223548014592 B)
[2026-03-25 06:23:09] 2026-03-25 05:22:49,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 06:23:09] 2026-03-25 05:22:49,719 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 06:23:09] 2026-03-25 05:22:49,719 | INFO     | update_server=False
[2026-03-25 06:23:09] 2026-03-25 05:22:49,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 06:23:09] 2026-03-25 05:22:49,720 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-25 06:23:09] 2026-03-25 05:22:49,720 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 06:23:09] 2026-03-25 05:22:49,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 06:23:09] 2026-03-25 05:22:49,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 06:23:09] 2026-03-25 05:22:49,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 06:23:09] 2026-03-25 05:22:49,786 | INFO     | all payload control threads have been joined
[2026-03-25 06:23:09] 2026-03-25 05:22:49,883 | INFO     | all data control threads have been joined
[2026-03-25 06:23:09] 2026-03-25 05:22:50,322 | INFO     | all job control threads have been joined
[2026-03-25 06:23:09] 2026-03-25 05:22:50,622 | WARNING  | process 18766 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 06:23:09] 2026-03-25 05:22:50,709 | INFO     | using path: /tmp/job_11389627/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 06:23:09] 2026-03-25 05:22:50,725 | INFO     | [job] retrieve thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:50,737 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:50,792 | INFO     | [payload] control thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:50,824 | INFO     | number of running child processes to parent process 18766: 1
[2026-03-25 06:23:09] 2026-03-25 05:22:50,824 | INFO     | maximum number of monitored processes: 6
[2026-03-25 06:23:09] 2026-03-25 05:22:50,824 | INFO     | aborting job monitoring since job object (job id=7056980440) has expired
[2026-03-25 06:23:09] 2026-03-25 05:22:50,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 06:23:09] 2026-03-25 05:22:50,824 | INFO     | will abort loop
[2026-03-25 06:23:09] 2026-03-25 05:22:50,889 | INFO     | [data] control thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:50,930 | INFO     | [data] copytool_in thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:51,290 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:51,327 | INFO     | [job] control thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:51,466 | INFO     | [payload] failed_post thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:51,520 | INFO     | job.realtimelogging is not enabled
[2026-03-25 06:23:09] 2026-03-25 05:22:51,725 | INFO     | [data] copytool_out thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:51,829 | INFO     | [job] job monitor thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:51,911 | INFO     | [job] validate thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:52,020 | INFO     | [payload] validate_post thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:52,146 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:52,525 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:52,625 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 06:23:09] 2026-03-25 05:22:52,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 06:23:09] 2026-03-25 05:22:53,630 | INFO     | [job] queue monitor thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:22:56,714 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 06:23:09] 2026-03-25 05:23:03,122 | INFO     | [monitor] cgroup control has ended
[2026-03-25 06:23:09] 2026-03-25 05:23:04,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-25 06:23:09] 2026-03-25 05:23:04,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 06:23:09] 2026-03-25 05:23:04,790 | INFO     | [monitor] control thread has ended
[2026-03-25 06:23:09] 2026-03-25 05:23:09,400 | INFO     | all workflow threads have been joined
[2026-03-25 06:23:09] 2026-03-25 05:23:09,400 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 06:23:09] 2026-03-25 05:23:09,400 | INFO     | traces error code: 0
[2026-03-25 06:23:09] 2026-03-25 05:23:09,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 06:23:09] 2026-03-25 05:23:09,452 [wrapper] ==== pilot stdout END ====
[2026-03-25 06:23:09] 2026-03-25 05:23:09,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 06:23:09] 2026-03-25 05:23:09,454 [wrapper] pilotpid: 12649
[2026-03-25 06:23:09] 2026-03-25 05:23:09,455 [wrapper] Pilot exit status: 0
[2026-03-25 06:23:09] 2026-03-25 05:23:09,460 [wrapper] pandaids: 7056980440
[2026-03-25 06:23:09] 2026-03-25 05:23:09,484 [wrapper] cleanup supervisor_pilot   848 12650
[2026-03-25 06:23:09] 2026-03-25 05:23:09,485 [wrapper] Test setup, not cleaning
[2026-03-25 06:23:09] 2026-03-25 05:23:09,486 [wrapper] apfmon messages muted
[2026-03-25 06:23:09] 2026-03-25 05:23:09,487 [wrapper] ==== wrapper stdout END ====
[2026-03-25 06:23:09] 2026-03-25 05:23:09,488 [wrapper] ==== wrapper stderr END ====
[2026-03-25 06:23:09]  *** Error codes and diagnostics ***
[2026-03-25 06:23:09]     "exeErrorCode": 0,
[2026-03-25 06:23:09]     "exeErrorDiag": "",
[2026-03-25 06:23:09]     "pilotErrorCode": 0,
[2026-03-25 06:23:09]     "pilotErrorDiag": "",
[2026-03-25 06:23:09]  *** Listing of results directory ***
[2026-03-25 06:23:09] total 471016
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user    585013 Mar 16 20:40 pilot3.tar.gz
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user      5111 Mar 16 20:41 queuedata.json
[2026-03-25 06:23:09] -rwx------ 1 mf493845 unix-user     36322 Mar 16 20:41 runpilot2-wrapper.sh
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user       100 Mar 25 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 06:23:09] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 03:26 run_atlas
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user       105 Mar 25 03:26 job.xml
[2026-03-25 06:23:09] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 04:27 start_atlas.sh
[2026-03-25 06:23:09] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 04:27 shared
[2026-03-25 06:23:09] -rw-r--r-- 2 mf493845 unix-user    597542 Mar 25 04:27 input.tar.gz
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user      6391 Mar 25 04:27 init_data.xml
[2026-03-25 06:23:09] -rw-r--r-- 2 mf493845 unix-user 239328917 Mar 25 04:27 EVNT.49133508._000005.pool.root.1
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user         0 Mar 25 04:27 boinc_setup_complete
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user      8192 Mar 25 04:27 boinc_mmap_file
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user         0 Mar 25 04:27 boinc_lockfile
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user      2645 Mar 25 04:27 pandaJob.out
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user   1010836 Mar 25 04:27 agis_schedconf.cvmfs.json
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user   1511579 Mar 25 04:27 agis_ddmendpoints.agis.ALL.json
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user       420 Mar 25 04:27 workernode_map.json
[2026-03-25 06:23:09] drwx------ 5 mf493845 unix-user       440 Mar 25 04:27 pilot3
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user 236347809 Mar 25 06:22 HITS.49176327._000103.pool.root.1
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user        95 Mar 25 06:22 pilot_heartbeat.json
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user      1013 Mar 25 06:22 memory_monitor_summary.json
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user    344956 Mar 25 06:22 log.49176327._000103.job.log.tgz.1
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user      6299 Mar 25 06:22 heartbeat.json
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user      5166 Mar 25 06:23 pilotlog.txt
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user   1016739 Mar 25 06:23 log.49176327._000103.job.log.1
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user       357 Mar 25 06:23 output.list
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user       620 Mar 25 06:23 runtime_log
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user   1382400 Mar 25 06:23 result.tar.gz
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user      9219 Mar 25 06:23 runtime_log.err
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user       645 Mar 25 06:23 N3rLDmhzSM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYlvLDmf3voNm.diag
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user     21711 Mar 25 06:23 stderr.txt
[2026-03-25 06:23:09] HITS file was successfully produced:
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user 236347809 Mar 25 06:22 shared/HITS.pool.root.1
[2026-03-25 06:23:09]  *** Contents of shared directory: ***
[2026-03-25 06:23:09] total 466484
[2026-03-25 06:23:09] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 04:27 start_atlas.sh
[2026-03-25 06:23:09] -rw-r--r-- 2 mf493845 unix-user    597542 Mar 25 04:27 input.tar.gz
[2026-03-25 06:23:09] -rw-r--r-- 2 mf493845 unix-user 239328917 Mar 25 04:27 ATLAS.root_0
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user 236347809 Mar 25 06:22 HITS.pool.root.1
[2026-03-25 06:23:09] -rw------- 1 mf493845 unix-user   1382400 Mar 25 06:23 result.tar.gz
06:23:10 (7657): run_atlas exited; CPU time 50777.335047
06:23:10 (7657): called boinc_finish(0)

</stderr_txt>
]]>

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