Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:25:50 (9333): wrapper (7.7.26015): starting
04:25:50 (9333): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 04:25:50] Arguments: --nthreads 8
[2026-03-25 04:25:50] Threads: 8
[2026-03-25 04:25:50] Checking for CVMFS
[2026-03-25 04:25:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 04:25:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 04:25:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 04:25:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 04:25:50] 2.11.0.0 8101 236489 109788 157668 0 188 3792464 4096000 908 130560 3 19301887 99.669 13263162 386 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 04:25:50] CVMFS is ok
[2026-03-25 04:25:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 04:25:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 04:25:50] Further information can be found at the LHC@home message board.
[2026-03-25 04:25:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 04:25:50] Checking for apptainer binary...
[2026-03-25 04:25:50] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 04:25:50] apptainer is not installed, using version from CVMFS
[2026-03-25 04:25:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 04:25:50] WARNING: Environment variable TMPDIR already has value [/tmp/job_11389655/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node232
[2026-03-25 04:25:50] apptainer works
[2026-03-25 04:25:50] Set ATHENA_PROC_NUMBER=8
[2026-03-25 04:25:50] Set ATHENA_CORE_NUMBER=8
[2026-03-25 04:25:50] Starting ATLAS job with PandaID=7056979586
[2026-03-25 04:25:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11389655/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 06:25:18]  *** The last 200 lines of the pilot log: ***
[2026-03-25 06:25:18] 2026-03-25 05:24:46,322 | INFO     | log transfer has been attempted: DONE
[2026-03-25 06:25:18] 2026-03-25 05:24:46,322 | INFO     | job 7056979586 has finished - writing final server update
[2026-03-25 06:25:18] 2026-03-25 05:24:46,322 | INFO     | total number of processed events: 400 (read)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,340 | INFO     | using path: /tmp/job_11389655/atlas/pilot/slots/0/PanDA_Pilot-7056979586/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,340 | INFO     | extracted standard info from prmon json
[2026-03-25 06:25:18] 2026-03-25 05:24:46,341 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 06:25:18] 2026-03-25 05:24:46,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 06:25:18] 2026-03-25 05:24:46,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 06:25:18] 2026-03-25 05:24:46,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 06:25:18] 2026-03-25 05:24:46,342 | INFO     | fitting pss+swap vs Time
[2026-03-25 06:25:18] 2026-03-25 05:24:46,342 | INFO     | sum of square deviations: 496597218.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,342 | INFO     | sum of deviations: 12937187623.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,342 | INFO     | mean x: 1774412713.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,342 | INFO     | mean y: 2518137.8205128205
[2026-03-25 06:25:18] 2026-03-25 05:24:46,342 | INFO     | intersect: -46223899080.48427
[2026-03-25 06:25:18] 2026-03-25 05:24:46,342 | INFO     | chi2: 1.146577856852051
[2026-03-25 06:25:18] 2026-03-25 05:24:46,343 | INFO     | sum of square deviations: 435610028.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,343 | INFO     | sum of deviations: 12305394366.5
[2026-03-25 06:25:18] 2026-03-25 05:24:46,343 | INFO     | mean x: 1774412560.5
[2026-03-25 06:25:18] 2026-03-25 05:24:46,343 | INFO     | mean y: 2516557.776785714
[2026-03-25 06:25:18] 2026-03-25 05:24:46,343 | INFO     | intersect: -50122239353.0847
[2026-03-25 06:25:18] 2026-03-25 05:24:46,343 | INFO     | chi2: 1.148066782719421
[2026-03-25 06:25:18] 2026-03-25 05:24:46,343 | INFO     | current chi2=1.148066782719421 (change=-0.12985824368333 %)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,343 | INFO     | right removable region: 111
[2026-03-25 06:25:18] 2026-03-25 05:24:46,343 | INFO     | sum of square deviations: 435610028.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | sum of deviations: -1040581005.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | mean x: 1774412865.5
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | mean y: 2552310.5
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | intersect: 4241252533.5970674
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | chi2: 0.004602950929733258
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | current chi2=0.004602950929733258 (change=99.59854876821268 %)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | sum of square deviations: 379832238.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | sum of deviations: -1479273912.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | mean x: 1774413018.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | mean y: 2553492.9906542054
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | intersect: 6913085628.0765295
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | chi2: 0.0033646418740998036
[2026-03-25 06:25:18] 2026-03-25 05:24:46,344 | INFO     | current chi2=0.0033646418740998036 (change=26.902503948813866 %)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | sum of square deviations: 329031285.5
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | sum of deviations: -1566479267.9999995
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | mean x: 1774413170.5
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | mean y: 2553752.1764705884
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | intersect: 8450326249.64738
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | chi2: 0.0030759857334206287
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | current chi2=0.0030759857334206287 (change=8.579104447970519 %)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | left removable region: 30
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | sum of square deviations: 164765880.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | sum of deviations: -1018604779.0000001
[2026-03-25 06:25:18] 2026-03-25 05:24:46,345 | INFO     | mean x: 1774413445.0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | mean y: 2551436.6790123456
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | intersect: 10972213450.433643
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | chi2: 0.002729770617715151
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | current memory leak: -6.18 B/s (using 81 data points, chi2=0.00)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | could have reported an average CPU frequency of 2473 MHz (7 samples)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | ..............................
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | . Timing measurements:
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | . get job = 0 s
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | . initial setup = 2 s
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | . payload setup = 4 s
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | . stage-in = 0 s
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | . payload execution = 7105 s
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | . stage-out = 0 s
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | . log creation = 0 s
[2026-03-25 06:25:18] 2026-03-25 05:24:46,346 | INFO     | ..............................
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | 
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | job summary report
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | --------------------------------------------------
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | PanDA job id: 7056979586
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | task id: 49182169
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | errors: (none)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | pilot state: finished 
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | transexitcode: 0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | exeerrorcode: 0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | exeerrordiag: 
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | exitcode: 0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,393 | INFO     | exitmsg: OK
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | cpuconsumptiontime: 52396 s
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | nevents: 400
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | neventsw: 0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | pid: 2436
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | pgrp: 2436
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | corecount: 8
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | event service: False
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | sizes: {0: 2280415, 11: 2280415, 7112: 2307839, 7114: 2316923, 7117: 2317061}
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | --------------------------------------------------
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | 
[2026-03-25 06:25:18] 2026-03-25 05:24:46,394 | INFO     | executing command: ls -lF /tmp/job_11389655/atlas/pilot/slots/0
[2026-03-25 06:25:18] 2026-03-25 05:24:46,403 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,403 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,403 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,403 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | job 7056979586 has completed (purged errors)
[2026-03-25 06:25:18] 2026-03-25 05:24:46,404 | INFO     | overall cleanup function is called
[2026-03-25 06:25:18] 2026-03-25 05:24:47,410 | INFO     | --- collectZombieJob: --- 10, [2436]
[2026-03-25 06:25:18] 2026-03-25 05:24:47,410 | INFO     | zombie collector waiting for pid 2436
[2026-03-25 06:25:18] 2026-03-25 05:24:47,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 06:25:18] 2026-03-25 05:24:47,410 | INFO     | collected zombie processes
[2026-03-25 06:25:18] 2026-03-25 05:24:47,410 | INFO     | will attempt to kill all subprocesses of pid=2436
[2026-03-25 06:25:18] 2026-03-25 05:24:47,510 | INFO     | process IDs to be killed: [2436] (in reverse order)
[2026-03-25 06:25:18] 2026-03-25 05:24:47,546 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 06:25:18] 2026-03-25 05:24:47,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 06:25:18] 2026-03-25 05:24:47,549 | INFO     | did not find any defunct processes belonging to 2436
[2026-03-25 06:25:18] 2026-03-25 05:24:47,552 | INFO     | did not find any defunct processes belonging to 2436
[2026-03-25 06:25:18] 2026-03-25 05:24:47,552 | INFO     | ready for new job
[2026-03-25 06:25:18] 2026-03-25 05:24:47,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 06:25:18] 2026-03-25 05:24:47,553 | INFO     | **************************************
[2026-03-25 06:25:18] 2026-03-25 05:24:47,553 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 06:25:18] 2026-03-25 05:24:47,553 | INFO     | **************************************
[2026-03-25 06:25:18] 2026-03-25 05:24:47,553 | INFO     | 
[2026-03-25 06:25:18] 2026-03-25 05:24:47,568 | INFO     | architecture information:
[2026-03-25 06:25:18] 2026-03-25 05:24:47,568 | INFO     | executing command: cat /etc/os-release
[2026-03-25 06:25:18] 2026-03-25 05:24:47,574 | INFO     | cat /etc/os-release:
[2026-03-25 06:25:18] NAME="CentOS Linux"
[2026-03-25 06:25:18] VERSION="7 (Core)"
[2026-03-25 06:25:18] ID="centos"
[2026-03-25 06:25:18] ID_LIKE="rhel fedora"
[2026-03-25 06:25:18] VERSION_ID="7"
[2026-03-25 06:25:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 06:25:18] ANSI_COLOR="0;31"
[2026-03-25 06:25:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 06:25:18] HOME_URL="https://www.centos.org/"
[2026-03-25 06:25:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 06:25:18] 
[2026-03-25 06:25:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 06:25:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 06:25:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 06:25:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 06:25:18] 
[2026-03-25 06:25:18] 2026-03-25 05:24:47,574 | INFO     | **************************************
[2026-03-25 06:25:18] 2026-03-25 05:24:48,077 | INFO     | executing command: df -mP /tmp/job_11389655/atlas/pilot/slots/0
[2026-03-25 06:25:18] 2026-03-25 05:24:48,083 | INFO     | sufficient remaining disk space (224500121600 B)
[2026-03-25 06:25:18] 2026-03-25 05:24:48,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 06:25:18] 2026-03-25 05:24:48,083 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 06:25:18] 2026-03-25 05:24:48,083 | INFO     | update_server=False
[2026-03-25 06:25:18] 2026-03-25 05:24:48,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 06:25:18] 2026-03-25 05:24:48,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 06:25:18] 2026-03-25 05:24:48,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 06:25:18] 2026-03-25 05:24:48,084 | INFO     | aborting loop
[2026-03-25 06:25:18] 2026-03-25 05:24:48,533 | INFO     | all data control threads have been joined
[2026-03-25 06:25:18] 2026-03-25 05:24:48,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 06:25:18] 2026-03-25 05:24:49,088 | INFO     | [job] job monitor thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:49,088 | INFO     | [job] retrieve thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:49,089 | INFO     | [job] queue monitor thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:49,093 | INFO     | [payload] failed_post thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:49,161 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:49,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 06:25:18] 2026-03-25 05:24:49,530 | INFO     | all payload control threads have been joined
[2026-03-25 06:25:18] 2026-03-25 05:24:49,539 | INFO     | [data] control thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:49,773 | INFO     | all job control threads have been joined
[2026-03-25 06:25:18] 2026-03-25 05:24:49,991 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:49,995 | INFO     | [job] validate thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:50,140 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:50,153 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:50,174 | INFO     | [data] copytool_in thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:50,535 | INFO     | [payload] control thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:50,566 | INFO     | [payload] validate_post thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:50,638 | INFO     | [data] copytool_out thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:50,774 | INFO     | [job] control thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:24:53,179 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 06:25:18] 2026-03-25 05:25:09,332 | INFO     | [monitor] cgroup control has ended
[2026-03-25 06:25:18] 2026-03-25 05:25:09,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-25 06:25:18] 2026-03-25 05:25:14,543 | INFO     | all workflow threads have been joined
[2026-03-25 06:25:18] 2026-03-25 05:25:14,543 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 06:25:18] 2026-03-25 05:25:14,543 | INFO     | traces error code: 0
[2026-03-25 06:25:18] 2026-03-25 05:25:14,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 06:25:18] 2026-03-25 05:25:18,208 | INFO     | PID=18578 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 06:25:18] 2026-03-25 05:25:18,208 | INFO     | .. there are 4 such processes running
[2026-03-25 06:25:18] 2026-03-25 05:25:18,209 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 06:25:18] 2026-03-25 05:25:18,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 06:25:18] 2026-03-25 05:25:18,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 06:25:18] 2026-03-25 05:25:18,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 06:25:18] 2026-03-25 05:25:18,209 | CRITICAL | thread 'MainThread' is not alive
[2026-03-25 06:25:18] 2026-03-25 05:25:18,209 | INFO     | [monitor] control thread has ended
[2026-03-25 06:25:18] 2026-03-25 05:25:18,259 [wrapper] ==== pilot stdout END ====
[2026-03-25 06:25:18] 2026-03-25 05:25:18,260 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 06:25:18] 2026-03-25 05:25:18,262 [wrapper] pilotpid: 18578
[2026-03-25 06:25:18] 2026-03-25 05:25:18,263 [wrapper] Pilot exit status: 0
[2026-03-25 06:25:18] 2026-03-25 05:25:18,267 [wrapper] pandaids: 7056979586
[2026-03-25 06:25:18] 2026-03-25 05:25:18,290 [wrapper] cleanup supervisor_pilot 27029 18579
[2026-03-25 06:25:18] 2026-03-25 05:25:18,291 [wrapper] Test setup, not cleaning
[2026-03-25 06:25:18] 2026-03-25 05:25:18,292 [wrapper] apfmon messages muted
[2026-03-25 06:25:18] 2026-03-25 05:25:18,294 [wrapper] ==== wrapper stdout END ====
[2026-03-25 06:25:18] 2026-03-25 05:25:18,295 [wrapper] ==== wrapper stderr END ====
[2026-03-25 06:25:18]  *** Error codes and diagnostics ***
[2026-03-25 06:25:18]     "exeErrorCode": 0,
[2026-03-25 06:25:18]     "exeErrorDiag": "",
[2026-03-25 06:25:18]     "pilotErrorCode": 0,
[2026-03-25 06:25:18]     "pilotErrorDiag": "",
[2026-03-25 06:25:18]  *** Listing of results directory ***
[2026-03-25 06:25:18] total 466840
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user    585013 Mar 16 20:40 pilot3.tar.gz
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user      5111 Mar 16 20:41 queuedata.json
[2026-03-25 06:25:18] -rwx------ 1 mf493845 unix-user     36322 Mar 16 20:41 runpilot2-wrapper.sh
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user       100 Mar 25 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 06:25:18] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 03:26 run_atlas
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user       105 Mar 25 03:26 job.xml
[2026-03-25 06:25:18] -rw-r--r-- 2 mf493845 unix-user 234788412 Mar 25 04:25 EVNT.49136439._000010.pool.root.1
[2026-03-25 06:25:18] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 04:25 start_atlas.sh
[2026-03-25 06:25:18] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 04:25 shared
[2026-03-25 06:25:18] -rw-r--r-- 2 mf493845 unix-user    597541 Mar 25 04:25 input.tar.gz
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user      6390 Mar 25 04:25 init_data.xml
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user         0 Mar 25 04:25 boinc_setup_complete
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user      8192 Mar 25 04:25 boinc_mmap_file
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user         0 Mar 25 04:25 boinc_lockfile
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user      2605 Mar 25 04:25 pandaJob.out
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user   1010836 Mar 25 04:25 agis_schedconf.cvmfs.json
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user   1511579 Mar 25 04:25 agis_ddmendpoints.agis.ALL.json
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user       416 Mar 25 04:25 workernode_map.json
[2026-03-25 06:25:18] drwx------ 5 mf493845 unix-user       440 Mar 25 04:25 pilot3
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user 236558422 Mar 25 06:24 HITS.49182169._000227.pool.root.1
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user      1016 Mar 25 06:24 memory_monitor_summary.json
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user        95 Mar 25 06:24 pilot_heartbeat.json
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user    346312 Mar 25 06:24 log.49182169._000227.job.log.tgz.1
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user      6298 Mar 25 06:24 heartbeat.json
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user       890 Mar 25 06:25 pilotlog.txt
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user   1047751 Mar 25 06:25 log.49182169._000227.job.log.1
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user       357 Mar 25 06:25 output.list
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user       620 Mar 25 06:25 runtime_log
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user   1413120 Mar 25 06:25 result.tar.gz
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user       644 Mar 25 06:25 UnOMDmhzSM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxtyLDmH1DCZn.diag
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user      9219 Mar 25 06:25 runtime_log.err
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user     21435 Mar 25 06:25 stderr.txt
[2026-03-25 06:25:18] HITS file was successfully produced:
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user 236558422 Mar 25 06:24 shared/HITS.pool.root.1
[2026-03-25 06:25:18]  *** Contents of shared directory: ***
[2026-03-25 06:25:18] total 462284
[2026-03-25 06:25:18] -rw-r--r-- 2 mf493845 unix-user 234788412 Mar 25 04:25 ATLAS.root_0
[2026-03-25 06:25:18] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 04:25 start_atlas.sh
[2026-03-25 06:25:18] -rw-r--r-- 2 mf493845 unix-user    597541 Mar 25 04:25 input.tar.gz
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user 236558422 Mar 25 06:24 HITS.pool.root.1
[2026-03-25 06:25:18] -rw------- 1 mf493845 unix-user   1413120 Mar 25 06:25 result.tar.gz
06:25:19 (9333): run_atlas exited; CPU time 52507.360660
06:25:19 (9333): called boinc_finish(0)

</stderr_txt>
]]>

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