Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:44:19 (2272264): wrapper (7.7.26015): starting
02:44:19 (2272264): wrapper: running run_atlas (--nthreads 12)
[2026-03-25 02:44:19] Arguments: --nthreads 12
[2026-03-25 02:44:19] Threads: 12
[2026-03-25 02:44:19] Checking for CVMFS
[2026-03-25 02:44:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 02:44:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 02:44:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 02:44:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 02:44:21] 2.11.0.0 1967501 111 54088 157666 0 188 5901635 6144001 14768 130560 0 1054940 99.998 5550 712 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-25 02:44:21] CVMFS is ok
[2026-03-25 02:44:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 02:44:21] Checking for apptainer binary...
[2026-03-25 02:44:21] apptainer is not installed, using version from CVMFS
[2026-03-25 02:44:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 02:44:22] radiat0r
[2026-03-25 02:44:22] apptainer works
[2026-03-25 02:44:22] Set ATHENA_PROC_NUMBER=12
[2026-03-25 02:44:22] Set ATHENA_CORE_NUMBER=12
[2026-03-25 02:44:22] Starting ATLAS job with PandaID=7056978580
[2026-03-25 02:44:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 05:09:07]  *** The last 200 lines of the pilot log: ***
[2026-03-25 05:09:07] 2026-03-25 05:08:18,842 | INFO     | log transfer has been attempted: DONE
[2026-03-25 05:09:07] 2026-03-25 05:08:18,842 | INFO     | job 7056978580 has finished - writing final server update
[2026-03-25 05:09:07] 2026-03-25 05:08:18,842 | INFO     | total number of processed events: 400 (read)
[2026-03-25 05:09:07] 2026-03-25 05:08:18,936 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-7056978580/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 05:09:07] 2026-03-25 05:08:18,937 | INFO     | extracted standard info from prmon json
[2026-03-25 05:09:07] 2026-03-25 05:08:18,937 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 05:09:07] 2026-03-25 05:08:18,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 05:09:07] 2026-03-25 05:08:18,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 05:09:07] 2026-03-25 05:08:18,938 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 05:09:07] 2026-03-25 05:08:18,940 | INFO     | fitting pss+swap vs Time
[2026-03-25 05:09:07] 2026-03-25 05:08:18,941 | INFO     | sum of square deviations: 869188390.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,942 | INFO     | sum of deviations: 24869215171.999996
[2026-03-25 05:09:07] 2026-03-25 05:08:18,942 | INFO     | mean x: 1774410992.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,942 | INFO     | mean y: 2618022.1985815605
[2026-03-25 05:09:07] 2026-03-25 05:08:18,942 | INFO     | intersect: -50766823069.40409
[2026-03-25 05:09:07] 2026-03-25 05:08:18,942 | INFO     | chi2: 2.566902094664681
[2026-03-25 05:09:07] 2026-03-25 05:08:18,943 | INFO     | sum of square deviations: 779958810.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,943 | INFO     | sum of deviations: 33720337864.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,944 | INFO     | mean x: 1774410839.5
[2026-03-25 05:09:07] 2026-03-25 05:08:18,944 | INFO     | mean y: 2632640.529411765
[2026-03-25 05:09:07] 2026-03-25 05:08:18,944 | INFO     | intersect: -76711332571.92055
[2026-03-25 05:09:07] 2026-03-25 05:08:18,944 | INFO     | chi2: 1.7505547014061738
[2026-03-25 05:09:07] 2026-03-25 05:08:18,944 | INFO     | current chi2=1.7505547014061738 (change=31.80282547414993 %)
[2026-03-25 05:09:07] 2026-03-25 05:08:18,944 | INFO     | sum of square deviations: 697054930.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,945 | INFO     | sum of deviations: 32042262146.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,945 | INFO     | mean x: 1774410687.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,945 | INFO     | mean y: 2629553.2290076334
[2026-03-25 05:09:07] 2026-03-25 05:08:18,945 | INFO     | intersect: -81563585590.70227
[2026-03-25 05:09:07] 2026-03-25 05:08:18,946 | INFO     | chi2: 1.7515855884738445
[2026-03-25 05:09:07] 2026-03-25 05:08:18,946 | INFO     | current chi2=1.7515855884738445 (change=-0.05888916620786853 %)
[2026-03-25 05:09:07] 2026-03-25 05:08:18,946 | INFO     | right removable region: 130
[2026-03-25 05:09:07] 2026-03-25 05:08:18,946 | INFO     | sum of square deviations: 779958810.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,947 | INFO     | sum of deviations: -1160781138.999998
[2026-03-25 05:09:07] 2026-03-25 05:08:18,947 | INFO     | mean x: 1774411144.5
[2026-03-25 05:09:07] 2026-03-25 05:08:18,947 | INFO     | mean y: 2661942.6911764704
[2026-03-25 05:09:07] 2026-03-25 05:08:18,947 | INFO     | intersect: 2643446254.57939
[2026-03-25 05:09:07] 2026-03-25 05:08:18,948 | INFO     | chi2: 0.980314825591598
[2026-03-25 05:09:07] 2026-03-25 05:08:18,948 | INFO     | current chi2=0.980314825591598 (change=61.80941892450096 %)
[2026-03-25 05:09:07] 2026-03-25 05:08:18,948 | INFO     | sum of square deviations: 697054930.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,949 | INFO     | sum of deviations: -9554613915.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,949 | INFO     | mean x: 1774411297.0
[2026-03-25 05:09:07] 2026-03-25 05:08:18,949 | INFO     | mean y: 2677388.5496183205
[2026-03-25 05:09:07] 2026-03-25 05:08:18,949 | INFO     | intersect: 24324741747.59432
[2026-03-25 05:09:07] 2026-03-25 05:08:18,949 | INFO     | chi2: 0.8627259856351218
[2026-03-25 05:09:07] 2026-03-25 05:08:18,949 | INFO     | current chi2=0.8627259856351218 (change=11.995007816546481 %)
[2026-03-25 05:09:07] 2026-03-25 05:08:18,949 | INFO     | left removable region: 20
[2026-03-25 05:09:07] 2026-03-25 05:08:18,950 | INFO     | sum of square deviations: 412686807.5
[2026-03-25 05:09:07] 2026-03-25 05:08:18,950 | INFO     | sum of deviations: 1076792008.0000002
[2026-03-25 05:09:07] 2026-03-25 05:08:18,950 | INFO     | mean x: 1774411266.5
[2026-03-25 05:09:07] 2026-03-25 05:08:18,950 | INFO     | mean y: 2690485.8727272726
[2026-03-25 05:09:07] 2026-03-25 05:08:18,951 | INFO     | intersect: -4627144623.824494
[2026-03-25 05:09:07] 2026-03-25 05:08:18,951 | INFO     | chi2: 0.009673138144439765
[2026-03-25 05:09:07] 2026-03-25 05:08:18,951 | INFO     | current memory leak: 2.61 B/s (using 110 data points, chi2=0.01)
[2026-03-25 05:09:07] 2026-03-25 05:08:18,951 | INFO     | could have reported an average CPU frequency of 2359 MHz (8 samples)
[2026-03-25 05:09:07] 2026-03-25 05:08:18,951 | INFO     | ..............................
[2026-03-25 05:09:07] 2026-03-25 05:08:18,952 | INFO     | . Timing measurements:
[2026-03-25 05:09:07] 2026-03-25 05:08:18,952 | INFO     | . get job = 0 s
[2026-03-25 05:09:07] 2026-03-25 05:08:18,952 | INFO     | . initial setup = 8 s
[2026-03-25 05:09:07] 2026-03-25 05:08:18,952 | INFO     | . payload setup = 14 s
[2026-03-25 05:09:07] 2026-03-25 05:08:18,952 | INFO     | . stage-in = 0 s
[2026-03-25 05:09:07] 2026-03-25 05:08:18,952 | INFO     | . payload execution = 8574 s
[2026-03-25 05:09:07] 2026-03-25 05:08:18,952 | INFO     | . stage-out = 1 s
[2026-03-25 05:09:07] 2026-03-25 05:08:18,952 | INFO     | . log creation = 0 s
[2026-03-25 05:09:07] 2026-03-25 05:08:18,952 | INFO     | ..............................
[2026-03-25 05:09:07] 2026-03-25 05:08:18,961 | INFO     | time since job start (8610s) is within the limit (345600.0s)
[2026-03-25 05:09:07] 2026-03-25 05:08:19,133 | INFO     | 
[2026-03-25 05:09:07] 2026-03-25 05:08:19,133 | INFO     | job summary report
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | --------------------------------------------------
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | PanDA job id: 7056978580
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | task id: 49181899
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | errors: (none)
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | pilot state: finished 
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | transexitcode: 0
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | exeerrorcode: 0
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | exeerrordiag: 
[2026-03-25 05:09:07] 2026-03-25 05:08:19,134 | INFO     | exitcode: 0
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | exitmsg: OK
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | cpuconsumptiontime: 94333 s
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | nevents: 400
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | neventsw: 0
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | pid: 2282849
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | pgrp: 2282849
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | corecount: 12
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | event service: False
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | sizes: {0: 2279933, 1: 2280337, 11: 2280337, 8593: 2308648, 8594: 2317648, 8597: 2317704, 8599: 2318026}
[2026-03-25 05:09:07] 2026-03-25 05:08:19,135 | INFO     | --------------------------------------------------
[2026-03-25 05:09:07] 2026-03-25 05:08:19,136 | INFO     | 
[2026-03-25 05:09:07] 2026-03-25 05:08:19,136 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-03-25 05:09:07] 2026-03-25 05:08:19,170 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,171 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,171 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,171 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,172 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 05:09:07] 2026-03-25 05:08:19,173 | INFO     | job 7056978580 has completed (purged errors)
[2026-03-25 05:09:07] 2026-03-25 05:08:19,173 | INFO     | overall cleanup function is called
[2026-03-25 05:09:07] 2026-03-25 05:08:20,183 | INFO     | --- collectZombieJob: --- 10, [2282849]
[2026-03-25 05:09:07] 2026-03-25 05:08:20,183 | INFO     | zombie collector waiting for pid 2282849
[2026-03-25 05:09:07] 2026-03-25 05:08:20,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 05:09:07] 2026-03-25 05:08:20,183 | INFO     | collected zombie processes
[2026-03-25 05:09:07] 2026-03-25 05:08:20,183 | INFO     | will attempt to kill all subprocesses of pid=2282849
[2026-03-25 05:09:07] 2026-03-25 05:08:20,986 | INFO     | process IDs to be killed: [2282849] (in reverse order)
[2026-03-25 05:09:07] 2026-03-25 05:08:21,263 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 05:09:07] 2026-03-25 05:08:21,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 05:09:07] 2026-03-25 05:08:21,291 | INFO     | did not find any defunct processes belonging to 2282849
[2026-03-25 05:09:07] 2026-03-25 05:08:21,317 | INFO     | did not find any defunct processes belonging to 2282849
[2026-03-25 05:09:07] 2026-03-25 05:08:21,317 | INFO     | ready for new job
[2026-03-25 05:09:07] 2026-03-25 05:08:21,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 05:09:07] 2026-03-25 05:08:21,320 | INFO     | **************************************
[2026-03-25 05:09:07] 2026-03-25 05:08:21,320 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 05:09:07] 2026-03-25 05:08:21,320 | INFO     | **************************************
[2026-03-25 05:09:07] 2026-03-25 05:08:21,320 | INFO     | 
[2026-03-25 05:09:07] 2026-03-25 05:08:21,356 | INFO     | architecture information:
[2026-03-25 05:09:07] 2026-03-25 05:08:21,357 | INFO     | executing command: cat /etc/os-release
[2026-03-25 05:09:07] 2026-03-25 05:08:21,383 | INFO     | cat /etc/os-release:
[2026-03-25 05:09:07] NAME="CentOS Linux"
[2026-03-25 05:09:07] VERSION="7 (Core)"
[2026-03-25 05:09:07] ID="centos"
[2026-03-25 05:09:07] ID_LIKE="rhel fedora"
[2026-03-25 05:09:07] VERSION_ID="7"
[2026-03-25 05:09:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 05:09:07] ANSI_COLOR="0;31"
[2026-03-25 05:09:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 05:09:07] HOME_URL="https://www.centos.org/"
[2026-03-25 05:09:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 05:09:07] 
[2026-03-25 05:09:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 05:09:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 05:09:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 05:09:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 05:09:07] 
[2026-03-25 05:09:07] 2026-03-25 05:08:21,384 | INFO     | **************************************
[2026-03-25 05:09:07] 2026-03-25 05:08:21,887 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-03-25 05:09:07] 2026-03-25 05:08:21,917 | INFO     | sufficient remaining disk space (1716533592064 B)
[2026-03-25 05:09:07] 2026-03-25 05:08:21,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 05:09:07] 2026-03-25 05:08:21,918 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 05:09:07] 2026-03-25 05:08:21,918 | INFO     | update_server=False
[2026-03-25 05:09:07] 2026-03-25 05:08:21,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 05:09:07] 2026-03-25 05:08:21,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 05:09:07] 2026-03-25 05:08:21,919 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:09:07] 2026-03-25 05:08:21,919 | INFO     | aborting loop
[2026-03-25 05:09:07] 2026-03-25 05:08:22,054 | INFO     | all payload control threads have been joined
[2026-03-25 05:09:07] 2026-03-25 05:08:22,160 | INFO     | all data control threads have been joined
[2026-03-25 05:09:07] 2026-03-25 05:08:22,309 | INFO     | all job control threads have been joined
[2026-03-25 05:09:07] 2026-03-25 05:08:22,923 | INFO     | [job] retrieve thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:22,925 | INFO     | [job] job monitor thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,059 | INFO     | [payload] control thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,154 | INFO     | [job] validate thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,164 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 05:09:07] 2026-03-25 05:08:23,165 | INFO     | [data] control thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,198 | INFO     | [payload] validate_post thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,314 | INFO     | [job] control thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,362 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,510 | INFO     | [payload] failed_post thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,564 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,760 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,794 | INFO     | [data] copytool_in thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:23,921 | INFO     | [data] copytool_out thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:24,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:09:07] 2026-03-25 05:08:24,090 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:25,065 | INFO     | [job] queue monitor thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:27,170 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 05:09:07] 2026-03-25 05:08:53,021 | INFO     | PID=2277292 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-25 05:09:07] 2026-03-25 05:08:53,021 | INFO     | .. there are 16 such processes running
[2026-03-25 05:09:07] 2026-03-25 05:08:53,021 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 05:09:07] 2026-03-25 05:08:53,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 05:09:07] 2026-03-25 05:08:53,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 05:09:07] 2026-03-25 05:09:00,910 | INFO     | [monitor] cgroup control has ended
[2026-03-25 05:09:07] 2026-03-25 05:09:01,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993197942592)>', '<ExcThread(monitor, started 139992756111104)>']
[2026-03-25 05:09:07] 2026-03-25 05:09:02,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 05:09:07] 2026-03-25 05:09:02,067 | INFO     | [monitor] control thread has ended
[2026-03-25 05:09:07] 2026-03-25 05:09:06,500 | INFO     | all workflow threads have been joined
[2026-03-25 05:09:07] 2026-03-25 05:09:06,501 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 05:09:07] 2026-03-25 05:09:06,501 | INFO     | traces error code: 0
[2026-03-25 05:09:07] 2026-03-25 05:09:06,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 05:09:07] 2026-03-25 05:09:06,670 [wrapper] ==== pilot stdout END ====
[2026-03-25 05:09:07] 2026-03-25 05:09:06,675 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 05:09:07] 2026-03-25 05:09:06,679 [wrapper] pilotpid: 2277292
[2026-03-25 05:09:07] 2026-03-25 05:09:06,683 [wrapper] Pilot exit status: 0
[2026-03-25 05:09:07] 2026-03-25 05:09:06,697 [wrapper] pandaids: 7056978580
[2026-03-25 05:09:07] 2026-03-25 05:09:06,888 [wrapper] cleanup supervisor_pilot 2565167 2277293
[2026-03-25 05:09:07] 2026-03-25 05:09:06,891 [wrapper] Test setup, not cleaning
[2026-03-25 05:09:07] 2026-03-25 05:09:06,895 [wrapper] apfmon messages muted
[2026-03-25 05:09:07] 2026-03-25 05:09:06,899 [wrapper] ==== wrapper stdout END ====
[2026-03-25 05:09:07] 2026-03-25 05:09:06,903 [wrapper] ==== wrapper stderr END ====
[2026-03-25 05:09:07]  *** Error codes and diagnostics ***
[2026-03-25 05:09:07]     "exeErrorCode": 0,
[2026-03-25 05:09:07]     "exeErrorDiag": "",
[2026-03-25 05:09:07]     "pilotErrorCode": 0,
[2026-03-25 05:09:07]     "pilotErrorDiag": "",
[2026-03-25 05:09:07]  *** Listing of results directory ***
[2026-03-25 05:09:07] total 482324
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc    585013 Mar 16 17:24 pilot3.tar.gz
[2026-03-25 05:09:07] -rwx------ 1 boinc boinc     36322 Mar 16 17:27 runpilot2-wrapper.sh
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc      5111 Mar 16 17:30 queuedata.json
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc       100 Mar 25 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 05:09:07] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 02:44 run_atlas
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc       105 Mar 25 02:44 job.xml
[2026-03-25 05:09:07] -rw-r--r-- 2 boinc boinc 242934100 Mar 25 02:44 EVNT.49135927._000007.pool.root.1
[2026-03-25 05:09:07] -rw-r--r-- 2 boinc boinc     15845 Mar 25 02:44 start_atlas.sh
[2026-03-25 05:09:07] drwxrwx--x 2 boinc boinc      4096 Mar 25 02:44 shared
[2026-03-25 05:09:07] -rw-r--r-- 2 boinc boinc    597530 Mar 25 02:44 input.tar.gz
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc      9415 Mar 25 02:44 init_data.xml
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc         0 Mar 25 02:44 boinc_setup_complete
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc         0 Mar 25 02:44 boinc_lockfile
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc      2617 Mar 25 02:44 pandaJob.out
[2026-03-25 05:09:07] -rw------- 1 boinc boinc   1010836 Mar 25 02:44 agis_schedconf.cvmfs.json
[2026-03-25 05:09:07] -rw------- 1 boinc boinc   1511579 Mar 25 02:44 agis_ddmendpoints.agis.ALL.json
[2026-03-25 05:09:07] -rw------- 1 boinc boinc       421 Mar 25 02:44 workernode_map.json
[2026-03-25 05:09:07] drwx------ 5 boinc boinc      4096 Mar 25 02:44 pilot3
[2026-03-25 05:09:07] -rw------- 1 boinc boinc 243755016 Mar 25 05:07 HITS.49181899._000162.pool.root.1
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc       529 Mar 25 05:07 boinc_task_state.xml
[2026-03-25 05:09:07] -rw------- 1 boinc boinc        95 Mar 25 05:07 pilot_heartbeat.json
[2026-03-25 05:09:07] -rw------- 1 boinc boinc      1030 Mar 25 05:08 memory_monitor_summary.json
[2026-03-25 05:09:07] -rw------- 1 boinc boinc    442255 Mar 25 05:08 log.49181899._000162.job.log.tgz.1
[2026-03-25 05:09:07] -rw------- 1 boinc boinc      6282 Mar 25 05:08 heartbeat.json
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc        27 Mar 25 05:09 wrapper_checkpoint.txt
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc      8192 Mar 25 05:09 boinc_mmap_file
[2026-03-25 05:09:07] -rw------- 1 boinc boinc      4824 Mar 25 05:09 pilotlog.txt
[2026-03-25 05:09:07] -rw------- 1 boinc boinc   1191708 Mar 25 05:09 log.49181899._000162.job.log.1
[2026-03-25 05:09:07] -rw------- 1 boinc boinc       357 Mar 25 05:09 output.list
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc       620 Mar 25 05:09 runtime_log
[2026-03-25 05:09:07] -rw------- 1 boinc boinc   1648640 Mar 25 05:09 result.tar.gz
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc      8787 Mar 25 05:09 runtime_log.err
[2026-03-25 05:09:07] -rw------- 1 boinc boinc       644 Mar 25 05:09 G5HMDmcuQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLsyLDm9wCGem.diag
[2026-03-25 05:09:07] -rw-r--r-- 1 boinc boinc     20747 Mar 25 05:09 stderr.txt
[2026-03-25 05:09:07] HITS file was successfully produced:
[2026-03-25 05:09:07] -rw------- 1 boinc boinc 243755016 Mar 25 05:07 shared/HITS.pool.root.1
[2026-03-25 05:09:07]  *** Contents of shared directory: ***
[2026-03-25 05:09:07] total 477508
[2026-03-25 05:09:07] -rw-r--r-- 2 boinc boinc 242934100 Mar 25 02:44 ATLAS.root_0
[2026-03-25 05:09:07] -rw-r--r-- 2 boinc boinc     15845 Mar 25 02:44 start_atlas.sh
[2026-03-25 05:09:07] -rw-r--r-- 2 boinc boinc    597530 Mar 25 02:44 input.tar.gz
[2026-03-25 05:09:07] -rw------- 1 boinc boinc 243755016 Mar 25 05:07 HITS.pool.root.1
[2026-03-25 05:09:07] -rw------- 1 boinc boinc   1648640 Mar 25 05:09 result.tar.gz
05:09:08 (2272264): run_atlas exited; CPU time 94957.650459
05:09:08 (2272264): called boinc_finish(0)

</stderr_txt>
]]>

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