Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:34:59 (21089): wrapper (7.7.26015): starting
03:34:59 (21089): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 03:34:59] Arguments: --nthreads 8
[2026-03-25 03:34:59] Threads: 8
[2026-03-25 03:34:59] Checking for CVMFS
[2026-03-25 03:34:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 03:34:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 03:34:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 03:34:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 03:34:59] 2.11.0.0 5805 29763 77780 157666 2 11 3821784 4096001 1834 130560 13 6712769 99.772 2251972 171 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 03:34:59] CVMFS is ok
[2026-03-25 03:34:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 03:34:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 03:34:59] Further information can be found at the LHC@home message board.
[2026-03-25 03:34:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 03:34:59] Checking for apptainer binary...
[2026-03-25 03:34:59] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 03:34:59] apptainer is not installed, using version from CVMFS
[2026-03-25 03:34:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 03:35:00] WARNING: Environment variable TMPDIR already has value [/tmp/job_11389556/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node052
[2026-03-25 03:35:00] apptainer works
[2026-03-25 03:35:00] Set ATHENA_PROC_NUMBER=8
[2026-03-25 03:35:00] Set ATHENA_CORE_NUMBER=8
[2026-03-25 03:35:00] Starting ATLAS job with PandaID=7056975445
[2026-03-25 03:35:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11389556/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 05:40:30]  *** The last 200 lines of the pilot log: ***
[2026-03-25 05:40:30] 2026-03-25 04:39:57,520 | INFO     | log transfer has been attempted: DONE
[2026-03-25 05:40:30] 2026-03-25 04:39:57,520 | INFO     | job 7056975445 has finished - writing final server update
[2026-03-25 05:40:30] 2026-03-25 04:39:57,520 | INFO     | total number of processed events: 400 (read)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,538 | INFO     | using path: /tmp/job_11389556/atlas/pilot/slots/0/PanDA_Pilot-7056975445/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,539 | INFO     | extracted standard info from prmon json
[2026-03-25 05:40:30] 2026-03-25 04:39:57,539 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 05:40:30] 2026-03-25 04:39:57,539 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 05:40:30] 2026-03-25 04:39:57,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 05:40:30] 2026-03-25 04:39:57,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 05:40:30] 2026-03-25 04:39:57,540 | INFO     | fitting pss+swap vs Time
[2026-03-25 05:40:30] 2026-03-25 04:39:57,540 | INFO     | sum of square deviations: 576985702.0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,541 | INFO     | sum of deviations: -29137358636.99999
[2026-03-25 05:40:30] 2026-03-25 04:39:57,541 | INFO     | mean x: 1774409849.0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,541 | INFO     | mean y: 2612986.0975609757
[2026-03-25 05:40:30] 2026-03-25 04:39:57,541 | INFO     | intersect: 89609020840.09668
[2026-03-25 05:40:30] 2026-03-25 04:39:57,541 | INFO     | chi2: 2.1482026853424276
[2026-03-25 05:40:30] 2026-03-25 04:39:57,541 | INFO     | sum of square deviations: 509440249.5
[2026-03-25 05:40:30] 2026-03-25 04:39:57,541 | INFO     | sum of deviations: -18986929387.5
[2026-03-25 05:40:30] 2026-03-25 04:39:57,541 | INFO     | mean x: 1774409696.5
[2026-03-25 05:40:30] 2026-03-25 04:39:57,541 | INFO     | mean y: 2635272.805084746
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | intersect: 66135202624.92752
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | chi2: 1.3207543328423044
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | current chi2=1.3207543328423044 (change=38.51816954451979 %)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | sum of square deviations: 447383272.0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | sum of deviations: -17517332912.0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | mean x: 1774409544.0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | mean y: 2638886.3982300884
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | intersect: 69479806786.58318
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | chi2: 1.3150616697303885
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | current chi2=1.3150616697303885 (change=0.43101604669091365 %)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | right removable region: 112
[2026-03-25 05:40:30] 2026-03-25 04:39:57,542 | INFO     | sum of square deviations: 509440249.5
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | sum of deviations: -39472445012.50001
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | mean x: 1774410001.5
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | mean y: 2635445.313559322
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | intersect: 137487455858.66177
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | chi2: 1.0619904391602686
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | current chi2=1.0619904391602686 (change=50.56376912632966 %)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | sum of square deviations: 447383272.0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | sum of deviations: -34531241486.0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | mean x: 1774410154.0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,543 | INFO     | mean y: 2623280.8761061947
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | intersect: 136960326793.27844
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | chi2: 1.0612230934913394
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | current chi2=1.0612230934913394 (change=0.07225542157761529 %)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | left removable region: 20
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | sum of square deviations: 241429643.0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | sum of deviations: -14066511702.5
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | mean x: 1774410123.5
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | mean y: 2621958.5760869565
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | intersect: 103385787576.09398
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | chi2: 0.16716580853826823
[2026-03-25 05:40:30] 2026-03-25 04:39:57,544 | INFO     | current memory leak: -58.26 B/s (using 92 data points, chi2=0.17)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | could have reported an average CPU frequency of 2629 MHz (8 samples)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | ..............................
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | . Timing measurements:
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | . get job = 0 s
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | . initial setup = 2 s
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | . payload setup = 4 s
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | . stage-in = 0 s
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | . payload execution = 7464 s
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | . stage-out = 0 s
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | . log creation = 0 s
[2026-03-25 05:40:30] 2026-03-25 04:39:57,545 | INFO     | ..............................
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | 
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | job summary report
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | --------------------------------------------------
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | PanDA job id: 7056975445
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | task id: 49181388
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | errors: (none)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | pilot state: finished 
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | transexitcode: 0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | exeerrorcode: 0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | exeerrordiag: 
[2026-03-25 05:40:30] 2026-03-25 04:39:57,602 | INFO     | exitcode: 0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | exitmsg: OK
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | cpuconsumptiontime: 50185 s
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | nevents: 400
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | neventsw: 0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | pid: 29472
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | pgrp: 29472
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | corecount: 8
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | event service: False
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | sizes: {0: 2279885, 1: 2280457, 11: 2280457, 7472: 2308207, 7473: 2317290, 7474: 2317290, 7476: 2317612}
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | --------------------------------------------------
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | 
[2026-03-25 05:40:30] 2026-03-25 04:39:57,603 | INFO     | executing command: ls -lF /tmp/job_11389556/atlas/pilot/slots/0
[2026-03-25 05:40:30] 2026-03-25 04:39:57,612 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | job 7056975445 has completed (purged errors)
[2026-03-25 05:40:30] 2026-03-25 04:39:57,613 | INFO     | overall cleanup function is called
[2026-03-25 05:40:30] 2026-03-25 04:39:58,619 | INFO     | --- collectZombieJob: --- 10, [29472]
[2026-03-25 05:40:30] 2026-03-25 04:39:58,619 | INFO     | zombie collector waiting for pid 29472
[2026-03-25 05:40:30] 2026-03-25 04:39:58,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 05:40:30] 2026-03-25 04:39:58,619 | INFO     | collected zombie processes
[2026-03-25 05:40:30] 2026-03-25 04:39:58,619 | INFO     | will attempt to kill all subprocesses of pid=29472
[2026-03-25 05:40:30] 2026-03-25 04:39:58,722 | INFO     | process IDs to be killed: [29472] (in reverse order)
[2026-03-25 05:40:30] 2026-03-25 04:39:58,760 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 05:40:30] 2026-03-25 04:39:58,760 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 05:40:30] 2026-03-25 04:39:58,763 | INFO     | did not find any defunct processes belonging to 29472
[2026-03-25 05:40:30] 2026-03-25 04:39:58,766 | INFO     | did not find any defunct processes belonging to 29472
[2026-03-25 05:40:30] 2026-03-25 04:39:58,766 | INFO     | ready for new job
[2026-03-25 05:40:30] 2026-03-25 04:39:58,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 05:40:30] 2026-03-25 04:39:58,767 | INFO     | **************************************
[2026-03-25 05:40:30] 2026-03-25 04:39:58,767 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 05:40:30] 2026-03-25 04:39:58,767 | INFO     | **************************************
[2026-03-25 05:40:30] 2026-03-25 04:39:58,767 | INFO     | 
[2026-03-25 05:40:30] 2026-03-25 04:39:58,782 | INFO     | architecture information:
[2026-03-25 05:40:30] 2026-03-25 04:39:58,782 | INFO     | executing command: cat /etc/os-release
[2026-03-25 05:40:30] 2026-03-25 04:39:58,788 | INFO     | cat /etc/os-release:
[2026-03-25 05:40:30] NAME="CentOS Linux"
[2026-03-25 05:40:30] VERSION="7 (Core)"
[2026-03-25 05:40:30] ID="centos"
[2026-03-25 05:40:30] ID_LIKE="rhel fedora"
[2026-03-25 05:40:30] VERSION_ID="7"
[2026-03-25 05:40:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 05:40:30] ANSI_COLOR="0;31"
[2026-03-25 05:40:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 05:40:30] HOME_URL="https://www.centos.org/"
[2026-03-25 05:40:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 05:40:30] 
[2026-03-25 05:40:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 05:40:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 05:40:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 05:40:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 05:40:30] 
[2026-03-25 05:40:30] 2026-03-25 04:39:58,788 | INFO     | **************************************
[2026-03-25 05:40:30] 2026-03-25 04:39:59,291 | INFO     | executing command: df -mP /tmp/job_11389556/atlas/pilot/slots/0
[2026-03-25 05:40:30] 2026-03-25 04:39:59,297 | INFO     | sufficient remaining disk space (224764362752 B)
[2026-03-25 05:40:30] 2026-03-25 04:39:59,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 05:40:30] 2026-03-25 04:39:59,297 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 05:40:30] 2026-03-25 04:39:59,297 | INFO     | update_server=False
[2026-03-25 05:40:30] 2026-03-25 04:39:59,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 05:40:30] 2026-03-25 04:39:59,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:40:30] 2026-03-25 04:39:59,483 | INFO     | all payload control threads have been joined
[2026-03-25 05:40:30] 2026-03-25 04:39:59,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 05:40:30] 2026-03-25 04:39:59,922 | INFO     | aborting loop
[2026-03-25 05:40:30] 2026-03-25 04:39:59,986 | INFO     | all data control threads have been joined
[2026-03-25 05:40:30] 2026-03-25 04:40:00,302 | INFO     | [job] validate thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:00,303 | INFO     | [job] retrieve thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:00,303 | INFO     | [job] queue monitor thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:00,367 | INFO     | [payload] validate_post thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:00,488 | INFO     | [payload] control thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:00,493 | INFO     | all job control threads have been joined
[2026-03-25 05:40:30] 2026-03-25 04:40:00,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 05:40:30] 2026-03-25 04:40:00,744 | INFO     | [payload] failed_post thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:00,927 | INFO     | [job] job monitor thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:00,991 | INFO     | [data] control thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:01,110 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:01,498 | INFO     | [job] control thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:01,555 | INFO     | [data] copytool_in thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:01,618 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:01,645 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:02,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 05:40:30] 2026-03-25 04:40:02,584 | INFO     | [data] copytool_out thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:06,292 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:09,598 | INFO     | job.realtimelogging is not enabled
[2026-03-25 05:40:30] 2026-03-25 04:40:10,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 05:40:30] 2026-03-25 04:40:22,566 | INFO     | [monitor] cgroup control has ended
[2026-03-25 05:40:30] 2026-03-25 04:40:24,017 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-25 05:40:30] 2026-03-25 04:40:29,042 | INFO     | all workflow threads have been joined
[2026-03-25 05:40:30] 2026-03-25 04:40:29,042 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 05:40:30] 2026-03-25 04:40:29,042 | INFO     | traces error code: 0
[2026-03-25 05:40:30] 2026-03-25 04:40:29,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 05:40:30] 2026-03-25 04:40:29,969 | INFO     | PID=24986 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 05:40:30] 2026-03-25 04:40:29,969 | INFO     | .. there are 5 such processes running
[2026-03-25 05:40:30] 2026-03-25 04:40:29,970 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 05:40:30] 2026-03-25 04:40:29,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 05:40:30] 2026-03-25 04:40:29,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 05:40:30] 2026-03-25 04:40:29,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 05:40:30] 2026-03-25 04:40:29,970 | INFO     | [monitor] control thread has ended
[2026-03-25 05:40:30] 2026-03-25 04:40:30,028 [wrapper] ==== pilot stdout END ====
[2026-03-25 05:40:30] 2026-03-25 04:40:30,029 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 05:40:30] 2026-03-25 04:40:30,030 [wrapper] pilotpid: 24986
[2026-03-25 05:40:30] 2026-03-25 04:40:30,031 [wrapper] Pilot exit status: 0
[2026-03-25 05:40:30] 2026-03-25 04:40:30,036 [wrapper] pandaids: 7056975445
[2026-03-25 05:40:30] 2026-03-25 04:40:30,059 [wrapper] cleanup supervisor_pilot 13824 24987
[2026-03-25 05:40:30] 2026-03-25 04:40:30,060 [wrapper] Test setup, not cleaning
[2026-03-25 05:40:30] 2026-03-25 04:40:30,061 [wrapper] apfmon messages muted
[2026-03-25 05:40:30] 2026-03-25 04:40:30,062 [wrapper] ==== wrapper stdout END ====
[2026-03-25 05:40:30] 2026-03-25 04:40:30,063 [wrapper] ==== wrapper stderr END ====
[2026-03-25 05:40:30]  *** Error codes and diagnostics ***
[2026-03-25 05:40:30]     "exeErrorCode": 0,
[2026-03-25 05:40:30]     "exeErrorDiag": "",
[2026-03-25 05:40:30]     "pilotErrorCode": 0,
[2026-03-25 05:40:30]     "pilotErrorDiag": "",
[2026-03-25 05:40:30]  *** Listing of results directory ***
[2026-03-25 05:40:30] total 483708
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user    585013 Mar 16 18:24 pilot3.tar.gz
[2026-03-25 05:40:30] -rwx------ 1 mf493845 unix-user     36322 Mar 16 18:27 runpilot2-wrapper.sh
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user      5111 Mar 16 18:29 queuedata.json
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user       100 Mar 25 02:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 05:40:30] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 02:33 run_atlas
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user       105 Mar 25 02:33 job.xml
[2026-03-25 05:40:30] -rw-r--r-- 2 mf493845 unix-user    597537 Mar 25 03:34 input.tar.gz
[2026-03-25 05:40:30] -rw-r--r-- 2 mf493845 unix-user 243164973 Mar 25 03:34 EVNT.49134998._000016.pool.root.1
[2026-03-25 05:40:30] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 03:34 start_atlas.sh
[2026-03-25 05:40:30] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 03:34 shared
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user      6389 Mar 25 03:34 init_data.xml
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user         0 Mar 25 03:34 boinc_setup_complete
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user      8192 Mar 25 03:34 boinc_mmap_file
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user         0 Mar 25 03:34 boinc_lockfile
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user      2613 Mar 25 03:35 pandaJob.out
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user   1010836 Mar 25 03:35 agis_schedconf.cvmfs.json
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user   1511579 Mar 25 03:35 agis_ddmendpoints.agis.ALL.json
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user       416 Mar 25 03:35 workernode_map.json
[2026-03-25 05:40:30] drwx------ 5 mf493845 unix-user       440 Mar 25 03:35 pilot3
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user 245298264 Mar 25 05:39 HITS.49181388._000388.pool.root.1
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user      1017 Mar 25 05:39 memory_monitor_summary.json
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user    365220 Mar 25 05:39 log.49181388._000388.job.log.tgz.1
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user      6309 Mar 25 05:39 heartbeat.json
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user       820 Mar 25 05:40 pilotlog.txt
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user        95 Mar 25 05:40 pilot_heartbeat.json
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user   1105961 Mar 25 05:40 log.49181388._000388.job.log.1
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user       357 Mar 25 05:40 output.list
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user       620 Mar 25 05:40 runtime_log
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user   1484800 Mar 25 05:40 result.tar.gz
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user      9219 Mar 25 05:40 runtime_log.err
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user       646 Mar 25 05:40 4LJLDmKuQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwoyLDmurk3dm.diag
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user     21471 Mar 25 05:40 stderr.txt
[2026-03-25 05:40:30] HITS file was successfully produced:
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user 245298264 Mar 25 05:39 shared/HITS.pool.root.1
[2026-03-25 05:40:30]  *** Contents of shared directory: ***
[2026-03-25 05:40:30] total 479072
[2026-03-25 05:40:30] -rw-r--r-- 2 mf493845 unix-user    597537 Mar 25 03:34 input.tar.gz
[2026-03-25 05:40:30] -rw-r--r-- 2 mf493845 unix-user 243164973 Mar 25 03:34 ATLAS.root_0
[2026-03-25 05:40:30] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 03:34 start_atlas.sh
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user 245298264 Mar 25 05:39 HITS.pool.root.1
[2026-03-25 05:40:30] -rw------- 1 mf493845 unix-user   1484800 Mar 25 05:40 result.tar.gz
05:40:31 (21089): run_atlas exited; CPU time 50288.825296
05:40:31 (21089): called boinc_finish(0)

</stderr_txt>
]]>

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