Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:44:16 (564778): wrapper (7.7.26015): starting
17:44:16 (564778): wrapper: running run_atlas (--nthreads 12)
[2026-03-26 17:44:16] Arguments: --nthreads 12
[2026-03-26 17:44:16] Threads: 12
[2026-03-26 17:44:16] Checking for CVMFS
[2026-03-26 17:44:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-26 17:44:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-26 17:44:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-26 17:44:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-26 17:44:18] 2.13.3.0 497957 316 47940 157727 1 50 6941913 204800001 0 130560 0 277165 99.994 11982 179 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-26 17:44:18] CVMFS is ok
[2026-03-26 17:44:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-26 17:44:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-26 17:44:18] Further information can be found at the LHC@home message board.
[2026-03-26 17:44:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-26 17:44:18] Checking for apptainer binary...
[2026-03-26 17:44:18] apptainer is not installed, using version from CVMFS
[2026-03-26 17:44:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-26 17:44:18] pc
[2026-03-26 17:44:18] apptainer works
[2026-03-26 17:44:18] Set ATHENA_PROC_NUMBER=12
[2026-03-26 17:44:18] Set ATHENA_CORE_NUMBER=12
[2026-03-26 17:44:18] Starting ATLAS job with PandaID=7056975507
[2026-03-26 17:44:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-26 18:56:48]  *** The last 200 lines of the pilot log: ***
[2026-03-26 18:56:48]  domain=
[2026-03-26 18:56:48]  filesize=395773
[2026-03-26 18:56:48]  filetype=log
[2026-03-26 18:56:48]  guid=1af72c3f-d15a-4dbd-8d1e-9f2b92d37f54
[2026-03-26 18:56:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-26 18:56:48]  is_altstaged=None
[2026-03-26 18:56:48]  is_tar=False
[2026-03-26 18:56:48]  lfn=log.49181388._000450.job.log.tgz.1
[2026-03-26 18:56:48]  mtime=0
[2026-03-26 18:56:48]  protocol_id=None
[2026-03-26 18:56:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-26 18:56:48]  replicas=None
[2026-03-26 18:56:48]  scope=mc23_13p6TeV
[2026-03-26 18:56:48]  status=None
[2026-03-26 18:56:48]  status_code=0
[2026-03-26 18:56:48]  storage_token=
[2026-03-26 18:56:48]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-7056975507/log.49181388._000450.job.log.tgz.1
[2026-03-26 18:56:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/fb/log.49181388._000450.job.log.tgz.1
[2026-03-26 18:56:48]  workdir=None
[2026-03-26 18:56:48] ]
[2026-03-26 18:56:48] 2026-03-26 17:56:12,443 | INFO     | transferring file log.49181388._000450.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-7056975507/log.49181388._000450.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-03-26 18:56:48] 2026-03-26 17:56:12,443 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-7056975507/log.49181388._000450.job.log.tgz.1 /var/lib/boinc/slots/0/log.49181388._000450.job
[2026-03-26 18:56:48] 2026-03-26 17:56:12,450 | INFO     | adding to output.list: log.49181388._000450.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/fb/log.49181388._000450.job.log.tg
[2026-03-26 18:56:48] 2026-03-26 17:56:12,450 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-26 18:56:48] 2026-03-26 17:56:12,450 | INFO     | summary of transferred files:
[2026-03-26 18:56:48] 2026-03-26 17:56:12,450 | INFO     |  -- lfn=log.49181388._000450.job.log.tgz.1, status_code=0, status=transferred
[2026-03-26 18:56:48] 2026-03-26 17:56:12,450 | INFO     | stage-out finished correctly
[2026-03-26 18:56:48] 2026-03-26 17:56:12,472 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-26 18:56:48] 2026-03-26 17:56:13,147 | INFO     | time since job start (4299s) is within the limit (345600.0s)
[2026-03-26 18:56:48] 2026-03-26 17:56:13,753 | INFO     | monitor loop #331: job 0:7056975507 is in state 'finished'
[2026-03-26 18:56:48] 2026-03-26 17:56:13,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,183 | INFO     | PID=568836 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-26 18:56:48] 2026-03-26 17:56:14,812 | INFO     | job 7056975507 has state=finished
[2026-03-26 18:56:48] 2026-03-26 17:56:14,812 | INFO     | preparing for final server update for job 7056975507 in state='finished'
[2026-03-26 18:56:48] 2026-03-26 17:56:14,812 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7056975507/jobReport.json
[2026-03-26 18:56:48] 2026-03-26 17:56:14,814 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-03-26 18:56:48] 2026-03-26 17:56:14,814 | INFO     | this job has now completed (state=finished)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,814 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,814 | INFO     | log transfer has been attempted: DONE
[2026-03-26 18:56:48] 2026-03-26 17:56:14,814 | INFO     | job 7056975507 has finished - writing final server update
[2026-03-26 18:56:48] 2026-03-26 17:56:14,814 | INFO     | total number of processed events: 400 (read)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,815 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7056975507/memory_monitor_summary.json (trf name=prmon)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,815 | INFO     | extracted standard info from prmon json
[2026-03-26 18:56:48] 2026-03-26 17:56:14,815 | INFO     | extracted standard memory fields from prmon json
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | INFO     | fitting pss+swap vs Time
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | INFO     | sum of square deviations: 81266640.0
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | INFO     | sum of deviations: -10035312733.5
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | INFO     | mean x: 1774545716.5
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | INFO     | mean y: 2856173.015625
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | INFO     | intersect: 219134854554.7665
[2026-03-26 18:56:48] 2026-03-26 17:56:14,816 | INFO     | chi2: 0.10308814094691961
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | current memory leak: -123.49 B/s (using 64 data points, chi2=0.10)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | could have reported an average CPU frequency of 3993 MHz (6 samples)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | ..............................
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | . Timing measurements:
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | . get job = 0 s
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | . initial setup = 5 s
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | . payload setup = 2 s
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | . stage-in = 0 s
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | . payload execution = 4279 s
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | . stage-out = 0 s
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | . log creation = 0 s
[2026-03-26 18:56:48] 2026-03-26 17:56:14,817 | INFO     | ..............................
[2026-03-26 18:56:48] 2026-03-26 17:56:14,841 | INFO     | 
[2026-03-26 18:56:48] 2026-03-26 17:56:14,841 | INFO     | job summary report
[2026-03-26 18:56:48] 2026-03-26 17:56:14,841 | INFO     | --------------------------------------------------
[2026-03-26 18:56:48] 2026-03-26 17:56:14,841 | INFO     | PanDA job id: 7056975507
[2026-03-26 18:56:48] 2026-03-26 17:56:14,841 | INFO     | task id: 49181388
[2026-03-26 18:56:48] 2026-03-26 17:56:14,841 | INFO     | errors: (none)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,841 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-26 18:56:48] 2026-03-26 17:56:14,841 | INFO     | pilot state: finished 
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | transexitcode: 0
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | exeerrorcode: 0
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | exeerrordiag: 
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | exitcode: 0
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | exitmsg: OK
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | cpuconsumptiontime: 49037 s
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | nevents: 400
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | neventsw: 0
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | pid: 573256
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | pgrp: 573256
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | corecount: 12
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | event service: False
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | sizes: {0: 2280303, 10: 2280303, 4286: 2306477, 4287: 2315531, 4289: 2315669}
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | --------------------------------------------------
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | 
[2026-03-26 18:56:48] 2026-03-26 17:56:14,842 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-03-26 18:56:48] 2026-03-26 17:56:14,850 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | job 7056975507 has completed (purged errors)
[2026-03-26 18:56:48] 2026-03-26 17:56:14,851 | INFO     | overall cleanup function is called
[2026-03-26 18:56:48] 2026-03-26 17:56:15,858 | INFO     | --- collectZombieJob: --- 10, [573256]
[2026-03-26 18:56:48] 2026-03-26 17:56:15,858 | INFO     | zombie collector waiting for pid 573256
[2026-03-26 18:56:48] 2026-03-26 17:56:15,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-26 18:56:48] 2026-03-26 17:56:15,858 | INFO     | collected zombie processes
[2026-03-26 18:56:48] 2026-03-26 17:56:15,858 | INFO     | will attempt to kill all subprocesses of pid=573256
[2026-03-26 18:56:48] 2026-03-26 17:56:15,883 | INFO     | process IDs to be killed: [573256] (in reverse order)
[2026-03-26 18:56:48] 2026-03-26 17:56:15,900 | WARNING  | found no corresponding commands to process id(s)
[2026-03-26 18:56:48] 2026-03-26 17:56:15,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-26 18:56:48] 2026-03-26 17:56:15,901 | INFO     | did not find any defunct processes belonging to 573256
[2026-03-26 18:56:48] 2026-03-26 17:56:15,901 | INFO     | did not find any defunct processes belonging to 573256
[2026-03-26 18:56:48] 2026-03-26 17:56:15,902 | INFO     | ready for new job
[2026-03-26 18:56:48] 2026-03-26 17:56:15,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-26 18:56:48] 2026-03-26 17:56:15,902 | INFO     | **************************************
[2026-03-26 18:56:48] 2026-03-26 17:56:15,902 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-26 18:56:48] 2026-03-26 17:56:15,902 | INFO     | **************************************
[2026-03-26 18:56:48] 2026-03-26 17:56:15,902 | INFO     | 
[2026-03-26 18:56:48] 2026-03-26 17:56:15,903 | INFO     | architecture information:
[2026-03-26 18:56:48] 2026-03-26 17:56:15,903 | INFO     | executing command: cat /etc/os-release
[2026-03-26 18:56:48] 2026-03-26 17:56:15,909 | INFO     | cat /etc/os-release:
[2026-03-26 18:56:48] NAME="CentOS Linux"
[2026-03-26 18:56:48] VERSION="7 (Core)"
[2026-03-26 18:56:48] ID="centos"
[2026-03-26 18:56:48] ID_LIKE="rhel fedora"
[2026-03-26 18:56:48] VERSION_ID="7"
[2026-03-26 18:56:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-26 18:56:48] ANSI_COLOR="0;31"
[2026-03-26 18:56:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-26 18:56:48] HOME_URL="https://www.centos.org/"
[2026-03-26 18:56:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-26 18:56:48] 
[2026-03-26 18:56:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-26 18:56:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-26 18:56:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-26 18:56:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-26 18:56:48] 
[2026-03-26 18:56:48] 2026-03-26 17:56:15,909 | INFO     | **************************************
[2026-03-26 18:56:48] 2026-03-26 17:56:16,412 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-03-26 18:56:48] 2026-03-26 17:56:16,422 | INFO     | sufficient remaining disk space (1621120516096 B)
[2026-03-26 18:56:48] 2026-03-26 17:56:16,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-26 18:56:48] 2026-03-26 17:56:16,422 | INFO     | current server update state: UPDATING_FINAL
[2026-03-26 18:56:48] 2026-03-26 17:56:16,422 | INFO     | update_server=False
[2026-03-26 18:56:48] 2026-03-26 17:56:16,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-26 18:56:48] 2026-03-26 17:56:16,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-26 18:56:48] 2026-03-26 17:56:16,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-26 18:56:48] 2026-03-26 17:56:16,543 | INFO     | all job control threads have been joined
[2026-03-26 18:56:48] 2026-03-26 17:56:16,568 | INFO     | all data control threads have been joined
[2026-03-26 18:56:48] 2026-03-26 17:56:17,019 | INFO     | all payload control threads have been joined
[2026-03-26 18:56:48] 2026-03-26 17:56:17,263 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-26 18:56:48] 2026-03-26 17:56:17,263 | INFO     | aborting loop
[2026-03-26 18:56:48] 2026-03-26 17:56:17,428 | INFO     | [job] retrieve thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:17,428 | INFO     | [job] queue monitor thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:17,549 | INFO     | [job] control thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:17,573 | INFO     | [data] control thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,025 | INFO     | [payload] control thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,123 | INFO     | [job] validate thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,146 | INFO     | [payload] failed_post thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,159 | INFO     | [payload] execute_payloads thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,179 | INFO     | [payload] validate_pre thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,182 | INFO     | [job] create_data_payload thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,268 | INFO     | [job] job monitor thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,292 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,332 | INFO     | [data] copytool_in thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,428 | INFO     | [data] copytool_out thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:18,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-26 18:56:48] 2026-03-26 17:56:18,666 | INFO     | [payload] validate_post thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:22,507 | INFO     | [data] queue_monitor thread has finished
[2026-03-26 18:56:48] 2026-03-26 17:56:41,572 | INFO     | [monitor] cgroup control has ended
[2026-03-26 18:56:48] 2026-03-26 17:56:43,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134065092532032)>', '<ExcThread(monitor, started 134064560391936)>']
[2026-03-26 18:56:48] 2026-03-26 17:56:46,261 | INFO     | PID=568836 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-26 18:56:48] 2026-03-26 17:56:46,261 | INFO     | found 0 job(s) in 20 queues
[2026-03-26 18:56:48] 2026-03-26 17:56:46,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-26 18:56:48] 2026-03-26 17:56:46,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-26 18:56:48] 2026-03-26 17:56:46,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-26 18:56:48] 2026-03-26 17:56:46,261 | INFO     | [monitor] control thread has ended
[2026-03-26 18:56:48] 2026-03-26 17:56:48,091 | INFO     | all workflow threads have been joined
[2026-03-26 18:56:48] 2026-03-26 17:56:48,091 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-26 18:56:48] 2026-03-26 17:56:48,091 | INFO     | traces error code: 0
[2026-03-26 18:56:48] 2026-03-26 17:56:48,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-26 18:56:48] 2026-03-26 17:56:48,130 [wrapper] ==== pilot stdout END ====
[2026-03-26 18:56:48] 2026-03-26 17:56:48,131 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-26 18:56:48] 2026-03-26 17:56:48,132 [wrapper] pilotpid: 568836
[2026-03-26 18:56:48] 2026-03-26 17:56:48,133 [wrapper] Pilot exit status: 0
[2026-03-26 18:56:48] 2026-03-26 17:56:48,136 [wrapper] pandaids: 7056975507
[2026-03-26 18:56:48] 2026-03-26 17:56:48,146 [wrapper] cleanup supervisor_pilot  578247 568837
[2026-03-26 18:56:48] 2026-03-26 17:56:48,147 [wrapper] Test setup, not cleaning
[2026-03-26 18:56:48] 2026-03-26 17:56:48,148 [wrapper] apfmon messages muted
[2026-03-26 18:56:48] 2026-03-26 17:56:48,148 [wrapper] ==== wrapper stdout END ====
[2026-03-26 18:56:48] 2026-03-26 17:56:48,149 [wrapper] ==== wrapper stderr END ====
[2026-03-26 18:56:48]  *** Error codes and diagnostics ***
[2026-03-26 18:56:48]     "exeErrorCode": 0,
[2026-03-26 18:56:48]     "exeErrorDiag": "",
[2026-03-26 18:56:48]     "pilotErrorCode": 0,
[2026-03-26 18:56:48]     "pilotErrorDiag": "",
[2026-03-26 18:56:48]  *** Listing of results directory ***
[2026-03-26 18:56:48] total 472740
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc    585013 Mar 16 18:24 pilot3.tar.gz
[2026-03-26 18:56:48] -rwx------ 1 boinc boinc     36322 Mar 16 18:27 runpilot2-wrapper.sh
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc      5111 Mar 16 18:30 queuedata.json
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc       100 Mar 26 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-26 18:56:48] -rwxr-xr-x 1 boinc boinc      7986 Mar 26 17:44 run_atlas
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc       105 Mar 26 17:44 job.xml
[2026-03-26 18:56:48] -rw-r--r-- 2 boinc boinc 238723102 Mar 26 17:44 EVNT.49134998._000018.pool.root.1
[2026-03-26 18:56:48] drwxrwx--x 2 boinc boinc      4096 Mar 26 17:44 shared
[2026-03-26 18:56:48] -rw-r--r-- 2 boinc boinc    597532 Mar 26 17:44 input.tar.gz
[2026-03-26 18:56:48] -rw-r--r-- 2 boinc boinc     15845 Mar 26 17:44 start_atlas.sh
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc         0 Mar 26 17:44 boinc_setup_complete
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc      6702 Mar 26 17:44 init_data.xml
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc         0 Mar 26 17:44 boinc_lockfile
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc      2613 Mar 26 17:44 pandaJob.out
[2026-03-26 18:56:48] -rw------- 1 boinc boinc   1012352 Mar 26 17:44 agis_schedconf.cvmfs.json
[2026-03-26 18:56:48] -rw------- 1 boinc boinc   1511579 Mar 26 17:44 agis_ddmendpoints.agis.ALL.json
[2026-03-26 18:56:48] -rw------- 1 boinc boinc       415 Mar 26 17:44 workernode_map.json
[2026-03-26 18:56:48] drwx------ 5 boinc boinc      4096 Mar 26 17:44 pilot3
[2026-03-26 18:56:48] -rw------- 1 boinc boinc 239355574 Mar 26 18:55 HITS.49181388._000450.pool.root.1
[2026-03-26 18:56:48] -rw------- 1 boinc boinc        95 Mar 26 18:56 pilot_heartbeat.json
[2026-03-26 18:56:48] -rw------- 1 boinc boinc      1012 Mar 26 18:56 memory_monitor_summary.json
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc       529 Mar 26 18:56 boinc_task_state.xml
[2026-03-26 18:56:48] -rw------- 1 boinc boinc    395773 Mar 26 18:56 log.49181388._000450.job.log.tgz.1
[2026-03-26 18:56:48] -rw------- 1 boinc boinc      6259 Mar 26 18:56 heartbeat.json
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc        27 Mar 26 18:56 wrapper_checkpoint.txt
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc      8192 Mar 26 18:56 boinc_mmap_file
[2026-03-26 18:56:48] -rw------- 1 boinc boinc      4745 Mar 26 18:56 pilotlog.txt
[2026-03-26 18:56:48] -rw------- 1 boinc boinc    635203 Mar 26 18:56 log.49181388._000450.job.log.1
[2026-03-26 18:56:48] -rw------- 1 boinc boinc       357 Mar 26 18:56 output.list
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc       620 Mar 26 18:56 runtime_log
[2026-03-26 18:56:48] -rw------- 1 boinc boinc   1044480 Mar 26 18:56 result.tar.gz
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc      8759 Mar 26 18:56 runtime_log.err
[2026-03-26 18:56:48] -rw------- 1 boinc boinc       641 Mar 26 18:56 oneLDmKuQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7evLDm5HYkzn.diag
[2026-03-26 18:56:48] -rw-r--r-- 1 boinc boinc     21207 Mar 26 18:56 stderr.txt
[2026-03-26 18:56:48] HITS file was successfully produced:
[2026-03-26 18:56:48] -rw------- 1 boinc boinc 239355574 Mar 26 18:55 shared/HITS.pool.root.1
[2026-03-26 18:56:48]  *** Contents of shared directory: ***
[2026-03-26 18:56:48] total 468508
[2026-03-26 18:56:48] -rw-r--r-- 2 boinc boinc 238723102 Mar 26 17:44 ATLAS.root_0
[2026-03-26 18:56:48] -rw-r--r-- 2 boinc boinc    597532 Mar 26 17:44 input.tar.gz
[2026-03-26 18:56:48] -rw-r--r-- 2 boinc boinc     15845 Mar 26 17:44 start_atlas.sh
[2026-03-26 18:56:48] -rw------- 1 boinc boinc 239355574 Mar 26 18:55 HITS.pool.root.1
[2026-03-26 18:56:48] -rw------- 1 boinc boinc   1044480 Mar 26 18:56 result.tar.gz
18:56:49 (564778): run_atlas exited; CPU time 49043.299804
18:56:49 (564778): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN