Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:47:57 (24708): wrapper (7.7.26015): starting
02:47:57 (24708): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 02:47:57] Arguments: --nthreads 8
[2026-03-25 02:47:57] Threads: 8
[2026-03-25 02:47:57] Checking for CVMFS
[2026-03-25 02:47:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 02:47:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 02:47:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 02:47:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 02:47:58] 2.11.0.0 5771 29567 68224 157665 2 188 4074529 4096000 1747 130560 0 3960477 99.810 1602545 268 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 02:47:58] CVMFS is ok
[2026-03-25 02:47:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 02:47:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 02:47:58] Further information can be found at the LHC@home message board.
[2026-03-25 02:47:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 02:47:58] Checking for apptainer binary...
[2026-03-25 02:47:58] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 02:47:58] apptainer is not installed, using version from CVMFS
[2026-03-25 02:47:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 02:47:58] WARNING: Environment variable TMPDIR already has value [/tmp/job_11389521/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node201
[2026-03-25 02:47:58] apptainer works
[2026-03-25 02:47:58] Set ATHENA_PROC_NUMBER=8
[2026-03-25 02:47:58] Set ATHENA_CORE_NUMBER=8
[2026-03-25 02:47:58] Starting ATLAS job with PandaID=7056977222
[2026-03-25 02:47:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11389521/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 04:55:24]  *** The last 200 lines of the pilot log: ***
[2026-03-25 04:55:24] 2026-03-25 03:54:31,147 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 04:55:24] 2026-03-25 03:54:31,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 04:55:24] 2026-03-25 03:54:31,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 04:55:24] 2026-03-25 03:54:31,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 04:55:24] 2026-03-25 03:54:31,148 | INFO     | fitting pss+swap vs Time
[2026-03-25 04:55:24] 2026-03-25 03:54:31,148 | INFO     | sum of square deviations: 591173875.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,148 | INFO     | sum of deviations: 17120573906.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | mean x: 1774407055.5
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | mean y: 2511578.919354839
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | intersect: -51384852473.688
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | chi2: 1.1349571895518686
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | sum of square deviations: 522502820.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | sum of deviations: 16125951643.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | mean x: 1774406903.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | mean y: 2509371.1344537814
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | intersect: -54760831260.75609
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | chi2: 1.1362664383399115
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | current chi2=1.1362664383399115 (change=-0.11535666720255658 %)
[2026-03-25 04:55:24] 2026-03-25 03:54:31,149 | INFO     | right removable region: 118
[2026-03-25 04:55:24] 2026-03-25 03:54:31,150 | INFO     | sum of square deviations: 522502820.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,150 | INFO     | sum of deviations: 2425805239.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,150 | INFO     | mean x: 1774407208.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,150 | INFO     | mean y: 2543562.4033613447
[2026-03-25 04:55:24] 2026-03-25 03:54:31,150 | INFO     | intersect: -8235433605.424675
[2026-03-25 04:55:24] 2026-03-25 03:54:31,150 | INFO     | chi2: 0.01786847631020011
[2026-03-25 04:55:24] 2026-03-25 03:54:31,150 | INFO     | current chi2=0.01786847631020011 (change=98.4256255236151 %)
[2026-03-25 04:55:24] 2026-03-25 03:54:31,150 | INFO     | sum of square deviations: 459366752.5
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | sum of deviations: 976662917.4999999
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | mean x: 1774407360.5
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | mean y: 2546973.254385965
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | intersect: -3770033127.7388916
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | chi2: 0.004338142568825293
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | current chi2=0.004338142568825293 (change=75.72181033505979 %)
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | sum of square deviations: 401533110.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | sum of deviations: 1287980351.9999995
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | mean x: 1774407513.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | mean y: 2546141.752293578
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | intersect: -5689143923.819593
[2026-03-25 04:55:24] 2026-03-25 03:54:31,151 | INFO     | chi2: 0.0036893231567134695
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | current chi2=0.0036893231567134695 (change=14.956156968522926 %)
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | left removable region: 30
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | sum of square deviations: 211285822.0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | sum of deviations: 1675178919.5
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | mean x: 1774407787.5
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | mean y: 2542789.465909091
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | intersect: -14065843305.161089
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | chi2: 0.00011489277128308778
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | current memory leak: 7.93 B/s (using 88 data points, chi2=0.00)
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | could have reported an average CPU frequency of 2396 MHz (8 samples)
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | ..............................
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | . Timing measurements:
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | . get job = 0 s
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | . initial setup = 5 s
[2026-03-25 04:55:24] 2026-03-25 03:54:31,152 | INFO     | . payload setup = 3 s
[2026-03-25 04:55:24] 2026-03-25 03:54:31,153 | INFO     | . stage-in = 0 s
[2026-03-25 04:55:24] 2026-03-25 03:54:31,153 | INFO     | . payload execution = 7561 s
[2026-03-25 04:55:24] 2026-03-25 03:54:31,153 | INFO     | . stage-out = 0 s
[2026-03-25 04:55:24] 2026-03-25 03:54:31,153 | INFO     | . log creation = 0 s
[2026-03-25 04:55:24] 2026-03-25 03:54:31,153 | INFO     | ..............................
[2026-03-25 04:55:24] 2026-03-25 03:54:31,686 | INFO     | 
[2026-03-25 04:55:24] 2026-03-25 03:54:31,686 | INFO     | job summary report
[2026-03-25 04:55:24] 2026-03-25 03:54:31,686 | INFO     | --------------------------------------------------
[2026-03-25 04:55:24] 2026-03-25 03:54:31,686 | INFO     | PanDA job id: 7056977222
[2026-03-25 04:55:24] 2026-03-25 03:54:31,686 | INFO     | task id: 49181660
[2026-03-25 04:55:24] 2026-03-25 03:54:31,686 | INFO     | errors: (none)
[2026-03-25 04:55:24] 2026-03-25 03:54:31,686 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 04:55:24] 2026-03-25 03:54:31,686 | INFO     | pilot state: finished 
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | transexitcode: 0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | exeerrorcode: 0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | exeerrordiag: 
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | exitcode: 0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | exitmsg: OK
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | cpuconsumptiontime: 55423 s
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | nevents: 400
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | neventsw: 0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | pid: 3075
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | pgrp: 3075
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | corecount: 8
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | event service: False
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | sizes: {0: 2279880, 1: 2280452, 11: 2280452, 7569: 2308199, 7570: 2317227, 7573: 2317605}
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | --------------------------------------------------
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | 
[2026-03-25 04:55:24] 2026-03-25 03:54:31,687 | INFO     | executing command: ls -lF /tmp/job_11389521/atlas/pilot/slots/0
[2026-03-25 04:55:24] 2026-03-25 03:54:31,696 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,696 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,696 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,696 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | job 7056977222 has completed (purged errors)
[2026-03-25 04:55:24] 2026-03-25 03:54:31,697 | INFO     | overall cleanup function is called
[2026-03-25 04:55:24] 2026-03-25 03:54:32,609 | WARNING  | process 3075 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 04:55:24] 2026-03-25 03:54:32,682 | INFO     | using path: /tmp/job_11389521/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 04:55:24] 2026-03-25 03:54:32,703 | INFO     | --- collectZombieJob: --- 10, [3075]
[2026-03-25 04:55:24] 2026-03-25 03:54:32,703 | INFO     | zombie collector waiting for pid 3075
[2026-03-25 04:55:24] 2026-03-25 03:54:32,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 04:55:24] 2026-03-25 03:54:32,703 | INFO     | collected zombie processes
[2026-03-25 04:55:24] 2026-03-25 03:54:32,703 | INFO     | will attempt to kill all subprocesses of pid=3075
[2026-03-25 04:55:24] 2026-03-25 03:54:32,904 | INFO     | number of running child processes to parent process 3075: 1
[2026-03-25 04:55:24] 2026-03-25 03:54:32,905 | INFO     | maximum number of monitored processes: 6
[2026-03-25 04:55:24] 2026-03-25 03:54:32,905 | INFO     | aborting job monitoring since job object (job id=7056977222) has expired
[2026-03-25 04:55:24] 2026-03-25 03:54:32,925 | INFO     | process IDs to be killed: [3075] (in reverse order)
[2026-03-25 04:55:24] 2026-03-25 03:54:32,954 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 04:55:24] 2026-03-25 03:54:32,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 04:55:24] 2026-03-25 03:54:32,958 | INFO     | did not find any defunct processes belonging to 3075
[2026-03-25 04:55:24] 2026-03-25 03:54:32,961 | INFO     | did not find any defunct processes belonging to 3075
[2026-03-25 04:55:24] 2026-03-25 03:54:32,961 | INFO     | ready for new job
[2026-03-25 04:55:24] 2026-03-25 03:54:32,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 04:55:24] 2026-03-25 03:54:32,962 | INFO     | **************************************
[2026-03-25 04:55:24] 2026-03-25 03:54:32,962 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 04:55:24] 2026-03-25 03:54:32,962 | INFO     | **************************************
[2026-03-25 04:55:24] 2026-03-25 03:54:32,962 | INFO     | 
[2026-03-25 04:55:24] 2026-03-25 03:54:32,975 | INFO     | architecture information:
[2026-03-25 04:55:24] 2026-03-25 03:54:32,975 | INFO     | executing command: cat /etc/os-release
[2026-03-25 04:55:24] 2026-03-25 03:54:32,979 | INFO     | cat /etc/os-release:
[2026-03-25 04:55:24] NAME="CentOS Linux"
[2026-03-25 04:55:24] VERSION="7 (Core)"
[2026-03-25 04:55:24] ID="centos"
[2026-03-25 04:55:24] ID_LIKE="rhel fedora"
[2026-03-25 04:55:24] VERSION_ID="7"
[2026-03-25 04:55:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 04:55:24] ANSI_COLOR="0;31"
[2026-03-25 04:55:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 04:55:24] HOME_URL="https://www.centos.org/"
[2026-03-25 04:55:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 04:55:24] 
[2026-03-25 04:55:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 04:55:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 04:55:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 04:55:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 04:55:24] 
[2026-03-25 04:55:24] 2026-03-25 03:54:32,980 | INFO     | **************************************
[2026-03-25 04:55:24] 2026-03-25 03:54:33,482 | INFO     | executing command: df -mP /tmp/job_11389521/atlas/pilot/slots/0
[2026-03-25 04:55:24] 2026-03-25 03:54:33,487 | INFO     | sufficient remaining disk space (228057939968 B)
[2026-03-25 04:55:24] 2026-03-25 03:54:33,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 04:55:24] 2026-03-25 03:54:33,487 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 04:55:24] 2026-03-25 03:54:33,487 | INFO     | update_server=False
[2026-03-25 04:55:24] 2026-03-25 03:54:33,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 04:55:24] 2026-03-25 03:54:33,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 04:55:24] 2026-03-25 03:54:33,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 04:55:24] 2026-03-25 03:54:33,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 04:55:24] 2026-03-25 03:54:33,488 | INFO     | will abort loop
[2026-03-25 04:55:24] 2026-03-25 03:54:33,526 | INFO     | all job control threads have been joined
[2026-03-25 04:55:24] 2026-03-25 03:54:33,974 | INFO     | all data control threads have been joined
[2026-03-25 04:55:24] 2026-03-25 03:54:34,492 | INFO     | [job] retrieve thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:34,493 | INFO     | [job] job monitor thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:34,531 | INFO     | [job] control thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:34,567 | INFO     | [payload] validate_post thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:34,881 | INFO     | all payload control threads have been joined
[2026-03-25 04:55:24] 2026-03-25 03:54:34,887 | INFO     | [data] copytool_in thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:34,979 | INFO     | [data] control thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:35,199 | INFO     | [payload] failed_post thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:35,493 | INFO     | [data] copytool_out thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:35,614 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:35,627 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:35,696 | INFO     | [job] validate thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:35,886 | INFO     | [payload] control thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:35,891 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:36,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 04:55:24] 2026-03-25 03:54:37,215 | INFO     | [job] queue monitor thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:37,493 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:54:44,536 | INFO     | job.realtimelogging is not enabled
[2026-03-25 04:55:24] 2026-03-25 03:54:45,541 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 04:55:24] 2026-03-25 03:55:03,022 | INFO     | PID=29591 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 04:55:24] 2026-03-25 03:55:03,022 | INFO     | .. there are 2 such processes running
[2026-03-25 04:55:24] 2026-03-25 03:55:03,022 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 04:55:24] 2026-03-25 03:55:03,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 04:55:24] 2026-03-25 03:55:03,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 04:55:24] 2026-03-25 03:55:19,305 | INFO     | [monitor] cgroup control has ended
[2026-03-25 04:55:24] 2026-03-25 03:55:19,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-25 04:55:24] 2026-03-25 03:55:20,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 04:55:24] 2026-03-25 03:55:20,107 | INFO     | [monitor] control thread has ended
[2026-03-25 04:55:24] 2026-03-25 03:55:24,774 | INFO     | all workflow threads have been joined
[2026-03-25 04:55:24] 2026-03-25 03:55:24,774 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 04:55:24] 2026-03-25 03:55:24,774 | INFO     | traces error code: 0
[2026-03-25 04:55:24] 2026-03-25 03:55:24,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 04:55:24] 2026-03-25 03:55:24,826 [wrapper] ==== pilot stdout END ====
[2026-03-25 04:55:24] 2026-03-25 03:55:24,827 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 04:55:24] 2026-03-25 03:55:24,828 [wrapper] pilotpid: 29591
[2026-03-25 04:55:24] 2026-03-25 03:55:24,829 [wrapper] Pilot exit status: 0
[2026-03-25 04:55:24] 2026-03-25 03:55:24,833 [wrapper] pandaids: 7056977222
[2026-03-25 04:55:24] 2026-03-25 03:55:24,853 [wrapper] cleanup supervisor_pilot 20037 29592
[2026-03-25 04:55:24] 2026-03-25 03:55:24,854 [wrapper] Test setup, not cleaning
[2026-03-25 04:55:24] 2026-03-25 03:55:24,855 [wrapper] apfmon messages muted
[2026-03-25 04:55:24] 2026-03-25 03:55:24,856 [wrapper] ==== wrapper stdout END ====
[2026-03-25 04:55:24] 2026-03-25 03:55:24,857 [wrapper] ==== wrapper stderr END ====
[2026-03-25 04:55:24]  *** Error codes and diagnostics ***
[2026-03-25 04:55:24]     "exeErrorCode": 0,
[2026-03-25 04:55:24]     "exeErrorDiag": "",
[2026-03-25 04:55:24]     "pilotErrorCode": 0,
[2026-03-25 04:55:24]     "pilotErrorDiag": "",
[2026-03-25 04:55:24]  *** Listing of results directory ***
[2026-03-25 04:55:24] total 489480
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user    585013 Mar 16 18:24 pilot3.tar.gz
[2026-03-25 04:55:24] -rwx------ 1 mf493845 unix-user     36322 Mar 16 18:25 runpilot2-wrapper.sh
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user      5111 Mar 16 18:26 queuedata.json
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user       100 Mar 25 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 04:55:24] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 01:45 run_atlas
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user       105 Mar 25 01:45 job.xml
[2026-03-25 04:55:24] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 02:47 start_atlas.sh
[2026-03-25 04:55:24] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 02:47 shared
[2026-03-25 04:55:24] -rw-r--r-- 2 mf493845 unix-user    597547 Mar 25 02:47 input.tar.gz
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user      6391 Mar 25 02:47 init_data.xml
[2026-03-25 04:55:24] -rw-r--r-- 2 mf493845 unix-user 245073185 Mar 25 02:47 EVNT.49135495._000030.pool.root.1
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user         0 Mar 25 02:47 boinc_setup_complete
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user      8192 Mar 25 02:47 boinc_mmap_file
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user         0 Mar 25 02:47 boinc_lockfile
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user      2615 Mar 25 02:47 pandaJob.out
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user   1010844 Mar 25 02:48 agis_schedconf.cvmfs.json
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user   1511579 Mar 25 02:48 agis_ddmendpoints.agis.ALL.json
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user       420 Mar 25 02:48 workernode_map.json
[2026-03-25 04:55:24] drwx------ 5 mf493845 unix-user       440 Mar 25 02:48 pilot3
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user 249301142 Mar 25 04:54 HITS.49181660._000726.pool.root.1
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user      1030 Mar 25 04:54 memory_monitor_summary.json
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user    353898 Mar 25 04:54 log.49181660._000726.job.log.tgz.1
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user      6302 Mar 25 04:54 heartbeat.json
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user        95 Mar 25 04:55 pilot_heartbeat.json
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user      4905 Mar 25 04:55 pilotlog.txt
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user   1114648 Mar 25 04:55 log.49181660._000726.job.log.1
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user       357 Mar 25 04:55 output.list
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user       620 Mar 25 04:55 runtime_log
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user   1484800 Mar 25 04:55 result.tar.gz
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user      9219 Mar 25 04:55 runtime_log.err
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user       644 Mar 25 04:55 L8MODmCsQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwmyLDmIU3LEn.diag
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user     21500 Mar 25 04:55 stderr.txt
[2026-03-25 04:55:24] HITS file was successfully produced:
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user 249301142 Mar 25 04:54 shared/HITS.pool.root.1
[2026-03-25 04:55:24]  *** Contents of shared directory: ***
[2026-03-25 04:55:24] total 484844
[2026-03-25 04:55:24] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 02:47 start_atlas.sh
[2026-03-25 04:55:24] -rw-r--r-- 2 mf493845 unix-user    597547 Mar 25 02:47 input.tar.gz
[2026-03-25 04:55:24] -rw-r--r-- 2 mf493845 unix-user 245073185 Mar 25 02:47 ATLAS.root_0
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user 249301142 Mar 25 04:54 HITS.pool.root.1
[2026-03-25 04:55:24] -rw------- 1 mf493845 unix-user   1484800 Mar 25 04:55 result.tar.gz
04:55:26 (24708): run_atlas exited; CPU time 55541.240161
04:55:26 (24708): called boinc_finish(0)

</stderr_txt>
]]>

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