Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:00 (97781): wrapper (7.7.26015): starting
00:03:00 (97781): wrapper: running run_atlas (--nthreads 9)
[2026-03-25 00:03:00] Arguments: --nthreads 9
[2026-03-25 00:03:00] Threads: 9
[2026-03-25 00:03:00] Checking for CVMFS
[2026-03-25 00:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 00:03:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 00:03:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 00:03:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 00:03:02] 2.13.3.0 11830 200770 496340 157668 2 460 29605396 32935936 37802 16776704 0 798600345 99.545 1021066746 32402 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-25 00:03:02] CVMFS is ok
[2026-03-25 00:03:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 00:03:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 00:03:02] Further information can be found at the LHC@home message board.
[2026-03-25 00:03:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 00:03:02] Checking for apptainer binary...
[2026-03-25 00:03:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 00:03:02] Running /usr/bin/apptainer --version
[2026-03-25 00:03:02] apptainer version 1.4.5-2.el9
[2026-03-25 00:03:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 00:03:03] c6-8-25-1.aglt2.org
[2026-03-25 00:03:03] apptainer works
[2026-03-25 00:03:03] Set ATHENA_PROC_NUMBER=9
[2026-03-25 00:03:03] Set ATHENA_CORE_NUMBER=9
[2026-03-25 00:03:03] Starting ATLAS job with PandaID=7056975367
[2026-03-25 00:03:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 21:13:36]  *** The last 200 lines of the pilot log: ***
[2026-03-25 21:13:36] 2026-03-26 01:12:54,171 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7056975367/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 21:13:36] 2026-03-26 01:12:54,172 | INFO     | extracted standard info from prmon json
[2026-03-25 21:13:36] 2026-03-26 01:12:54,172 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 21:13:36] 2026-03-26 01:12:54,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 21:13:36] 2026-03-26 01:12:54,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 21:13:36] 2026-03-26 01:12:54,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 21:13:36] 2026-03-26 01:12:54,249 | INFO     | fitting pss+swap vs Time
[2026-03-25 21:13:36] 2026-03-26 01:12:54,251 | INFO     | sum of square deviations: 596943179340.3439
[2026-03-25 21:13:36] 2026-03-26 01:12:54,389 | INFO     | sum of deviations: 1780608624639.5537
[2026-03-25 21:13:36] 2026-03-26 01:12:54,389 | INFO     | mean x: 1774449602.073151
[2026-03-25 21:13:36] 2026-03-26 01:12:54,390 | INFO     | mean y: 2545129.5763665596
[2026-03-25 21:13:36] 2026-03-26 01:12:54,390 | INFO     | intersect: -5290421395.196083
[2026-03-25 21:13:36] 2026-03-26 01:12:54,417 | INFO     | chi2: 8.460162591972123
[2026-03-25 21:13:36] 2026-03-26 01:12:54,419 | INFO     | sum of square deviations: 589774162024.9924
[2026-03-25 21:13:36] 2026-03-26 01:12:54,582 | INFO     | sum of deviations: 1933877903191.7224
[2026-03-25 21:13:36] 2026-03-26 01:12:54,583 | INFO     | mean x: 1774449449.57385
[2026-03-25 21:13:36] 2026-03-26 01:12:54,583 | INFO     | mean y: 2548381.472962066
[2026-03-25 21:13:36] 2026-03-26 01:12:54,583 | INFO     | intersect: -5815896714.66227
[2026-03-25 21:13:36] 2026-03-26 01:12:54,585 | INFO     | chi2: 7.07163705364852
[2026-03-25 21:13:36] 2026-03-26 01:12:54,585 | INFO     | current chi2=7.07163705364852 (change=16.41251599160966 %)
[2026-03-25 21:13:36] 2026-03-26 01:12:54,585 | INFO     | right removable region: 1238
[2026-03-25 21:13:36] 2026-03-26 01:12:54,586 | INFO     | sum of square deviations: 589774106147.139
[2026-03-25 21:13:36] 2026-03-26 01:12:54,617 | INFO     | sum of deviations: 1363363319539.9685
[2026-03-25 21:13:36] 2026-03-26 01:12:54,617 | INFO     | mean x: 1774449754.5730429
[2026-03-25 21:13:36] 2026-03-26 01:12:54,618 | INFO     | mean y: 2554002.6577885393
[2026-03-25 21:13:36] 2026-03-26 01:12:54,618 | INFO     | intersect: -4099388898.0839915
[2026-03-25 21:13:36] 2026-03-26 01:12:54,620 | INFO     | chi2: 4.606402776663217
[2026-03-25 21:13:36] 2026-03-26 01:12:54,620 | INFO     | current chi2=4.606402776663217 (change=45.551841036314734 %)
[2026-03-25 21:13:36] 2026-03-26 01:12:54,621 | INFO     | sum of square deviations: 582662435327.9907
[2026-03-25 21:13:36] 2026-03-26 01:12:54,691 | INFO     | sum of deviations: 1074161226345.5549
[2026-03-25 21:13:36] 2026-03-26 01:12:54,727 | INFO     | mean x: 1774449907.0753646
[2026-03-25 21:13:36] 2026-03-26 01:12:54,727 | INFO     | mean y: 2560202.7682333873
[2026-03-25 21:13:36] 2026-03-26 01:12:54,727 | INFO     | intersect: -3268708327.1823616
[2026-03-25 21:13:36] 2026-03-26 01:12:54,729 | INFO     | chi2: 2.838086011388304
[2026-03-25 21:13:36] 2026-03-26 01:12:54,729 | INFO     | current chi2=2.838086011388304 (change=38.388235918784446 %)
[2026-03-25 21:13:36] 2026-03-26 01:12:54,730 | INFO     | sum of square deviations: 575608160933.8336
[2026-03-25 21:13:36] 2026-03-26 01:12:54,861 | INFO     | sum of deviations: 930992143890.2589
[2026-03-25 21:13:36] 2026-03-26 01:12:54,861 | INFO     | mean x: 1774450059.5777054
[2026-03-25 21:13:36] 2026-03-26 01:12:54,862 | INFO     | mean y: 2563297.4109031735
[2026-03-25 21:13:36] 2026-03-26 01:12:54,862 | INFO     | intersect: -2867443032.0899453
[2026-03-25 21:13:36] 2026-03-26 01:12:54,863 | INFO     | chi2: 2.4437961742403593
[2026-03-25 21:13:36] 2026-03-26 01:12:54,863 | INFO     | current chi2=2.4437961742403593 (change=13.892807884108855 %)
[2026-03-25 21:13:36] 2026-03-26 01:12:54,864 | INFO     | left removable region: 30
[2026-03-25 21:13:36] 2026-03-26 01:12:54,865 | INFO     | sum of square deviations: 546602249665.3867
[2026-03-25 21:13:36] 2026-03-26 01:12:55,017 | INFO     | sum of deviations: 833530631349.7281
[2026-03-25 21:13:36] 2026-03-26 01:12:55,018 | INFO     | mean x: 1774450334.0844371
[2026-03-25 21:13:36] 2026-03-26 01:12:55,018 | INFO     | mean y: 2572179.453642384
[2026-03-25 21:13:36] 2026-03-26 01:12:55,018 | INFO     | intersect: -2703341870.796922
[2026-03-25 21:13:36] 2026-03-26 01:12:55,019 | INFO     | chi2: 0.6464706409516239
[2026-03-25 21:13:36] 2026-03-26 01:12:55,020 | INFO     | current memory leak: 1.52 B/s (using 1208 data points, chi2=0.65)
[2026-03-25 21:13:36] 2026-03-26 01:12:55,041 | INFO     | could have reported an average CPU frequency of 2638 MHz (46 samples)
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | ..............................
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | . Timing measurements:
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | . get job = 0 s
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | . initial setup = 39 s
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | . payload setup = 118 s
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | . stage-in = 0 s
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | . payload execution = 75915 s
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | . stage-out = 5 s
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | . log creation = 1 s
[2026-03-25 21:13:36] 2026-03-26 01:12:55,042 | INFO     | ..............................
[2026-03-25 21:13:36] 2026-03-26 01:12:55,726 | INFO     | 
[2026-03-25 21:13:36] 2026-03-26 01:12:55,726 | INFO     | job summary report
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | --------------------------------------------------
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | PanDA job id: 7056975367
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | task id: 49181388
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | errors: (none)
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | pilot state: finished 
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | transexitcode: 0
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | exeerrorcode: 0
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | exeerrordiag: 
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | exitcode: 0
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | exitmsg: OK
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | cpuconsumptiontime: 106031 s
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | nevents: 400
[2026-03-25 21:13:36] 2026-03-26 01:12:55,727 | INFO     | neventsw: 0
[2026-03-25 21:13:36] 2026-03-26 01:12:55,728 | INFO     | pid: 153722
[2026-03-25 21:13:36] 2026-03-26 01:12:55,728 | INFO     | pgrp: 153722
[2026-03-25 21:13:36] 2026-03-26 01:12:55,728 | INFO     | corecount: 9
[2026-03-25 21:13:36] 2026-03-26 01:12:55,728 | INFO     | event service: False
[2026-03-25 21:13:36] 2026-03-26 01:12:55,728 | INFO     | sizes: {0: 2279213, 1: 2279814, 2: 2279926, 3: 2279926, 4: 2280359, 5: 2280387, 16: 2280571, 76037: 2339732, 76038: 2339731, 76045: 2348841, 76047: 2348979}
[2026-03-25 21:13:36] 2026-03-26 01:12:55,728 | INFO     | --------------------------------------------------
[2026-03-25 21:13:36] 2026-03-26 01:12:55,728 | INFO     | 
[2026-03-25 21:13:36] 2026-03-26 01:12:55,728 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-03-25 21:13:36] 2026-03-26 01:12:55,874 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,874 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,874 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,874 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,875 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 21:13:36] 2026-03-26 01:12:55,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,876 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 21:13:36] 2026-03-26 01:12:55,876 | INFO     | job 7056975367 has completed (purged errors)
[2026-03-25 21:13:36] 2026-03-26 01:12:55,876 | INFO     | overall cleanup function is called
[2026-03-25 21:13:36] 2026-03-26 01:12:56,899 | INFO     | --- collectZombieJob: --- 10, [153722]
[2026-03-25 21:13:36] 2026-03-26 01:12:56,899 | INFO     | zombie collector waiting for pid 153722
[2026-03-25 21:13:36] 2026-03-26 01:12:56,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 21:13:36] 2026-03-26 01:12:56,900 | INFO     | collected zombie processes
[2026-03-25 21:13:36] 2026-03-26 01:12:56,900 | INFO     | will attempt to kill all subprocesses of pid=153722
[2026-03-25 21:13:36] 2026-03-26 01:12:59,278 | INFO     | PID=108152 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 21:13:36] 2026-03-26 01:12:59,278 | INFO     | .. there are 48 such processes running
[2026-03-25 21:13:36] 2026-03-26 01:13:00,251 | INFO     | process IDs to be killed: [153722] (in reverse order)
[2026-03-25 21:13:36] 2026-03-26 01:13:00,461 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 21:13:36] 2026-03-26 01:13:00,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 21:13:36] 2026-03-26 01:13:00,485 | INFO     | did not find any defunct processes belonging to 153722
[2026-03-25 21:13:36] 2026-03-26 01:13:00,580 | INFO     | did not find any defunct processes belonging to 153722
[2026-03-25 21:13:36] 2026-03-26 01:13:00,580 | INFO     | ready for new job
[2026-03-25 21:13:36] 2026-03-26 01:13:00,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 21:13:36] 2026-03-26 01:13:00,609 | INFO     | **************************************
[2026-03-25 21:13:36] 2026-03-26 01:13:00,609 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 21:13:36] 2026-03-26 01:13:00,609 | INFO     | **************************************
[2026-03-25 21:13:36] 2026-03-26 01:13:00,609 | INFO     | 
[2026-03-25 21:13:36] 2026-03-26 01:13:00,629 | INFO     | architecture information:
[2026-03-25 21:13:36] 2026-03-26 01:13:00,630 | INFO     | executing command: cat /etc/os-release
[2026-03-25 21:13:36] 2026-03-26 01:13:00,786 | INFO     | cat /etc/os-release:
[2026-03-25 21:13:36] NAME="CentOS Linux"
[2026-03-25 21:13:36] VERSION="7 (Core)"
[2026-03-25 21:13:36] ID="centos"
[2026-03-25 21:13:36] ID_LIKE="rhel fedora"
[2026-03-25 21:13:36] VERSION_ID="7"
[2026-03-25 21:13:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 21:13:36] ANSI_COLOR="0;31"
[2026-03-25 21:13:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 21:13:36] HOME_URL="https://www.centos.org/"
[2026-03-25 21:13:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 21:13:36] 
[2026-03-25 21:13:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 21:13:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 21:13:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 21:13:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 21:13:36] 
[2026-03-25 21:13:36] 2026-03-26 01:13:00,786 | INFO     | **************************************
[2026-03-25 21:13:36] 2026-03-26 01:13:01,290 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-03-25 21:13:36] 2026-03-26 01:13:01,410 | INFO     | sufficient remaining disk space (71272759296 B)
[2026-03-25 21:13:36] 2026-03-26 01:13:01,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 21:13:36] 2026-03-26 01:13:01,410 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 21:13:36] 2026-03-26 01:13:01,411 | INFO     | update_server=False
[2026-03-25 21:13:36] 2026-03-26 01:13:01,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 21:13:36] 2026-03-26 01:13:01,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 21:13:36] 2026-03-26 01:13:01,617 | INFO     | all data control threads have been joined
[2026-03-25 21:13:36] 2026-03-26 01:13:01,844 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 21:13:36] 2026-03-26 01:13:01,845 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 21:13:36] 2026-03-26 01:13:01,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 21:13:36] 2026-03-26 01:13:01,845 | INFO     | will abort loop
[2026-03-25 21:13:36] 2026-03-26 01:13:02,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 21:13:36] 2026-03-26 01:13:02,419 | INFO     | [job] retrieve thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:02,420 | INFO     | [job] queue monitor thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:02,429 | INFO     | all job control threads have been joined
[2026-03-25 21:13:36] 2026-03-26 01:13:02,623 | INFO     | [data] control thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:02,631 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:02,639 | INFO     | [job] validate thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:02,785 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:02,810 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:02,837 | INFO     | all payload control threads have been joined
[2026-03-25 21:13:36] 2026-03-26 01:13:02,845 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:02,850 | INFO     | [job] job monitor thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:03,002 | INFO     | [payload] failed_post thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:03,435 | INFO     | [job] control thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:03,694 | INFO     | [data] copytool_in thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:03,843 | INFO     | [payload] control thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:03,999 | INFO     | [payload] validate_post thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:04,040 | INFO     | [data] copytool_out thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:04,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 21:13:36] 2026-03-26 01:13:08,706 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 21:13:36] 2026-03-26 01:13:28,377 | INFO     | [monitor] cgroup control has ended
[2026-03-25 21:13:36] 2026-03-26 01:13:29,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475548718912)>', '<ExcThread(monitor, started 140475184948992)>']
[2026-03-25 21:13:36] 2026-03-26 01:13:33,044 | INFO     | PID=108152 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-25 21:13:36] 2026-03-26 01:13:33,044 | INFO     | .. there are 48 such processes running
[2026-03-25 21:13:36] 2026-03-26 01:13:33,048 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 21:13:36] 2026-03-26 01:13:33,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 21:13:36] 2026-03-26 01:13:33,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 21:13:36] 2026-03-26 01:13:33,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 21:13:36] 2026-03-26 01:13:33,048 | INFO     | [monitor] control thread has ended
[2026-03-25 21:13:36] 2026-03-26 01:13:34,913 | INFO     | all workflow threads have been joined
[2026-03-25 21:13:36] 2026-03-26 01:13:34,914 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 21:13:36] 2026-03-26 01:13:34,918 | INFO     | traces error code: 0
[2026-03-25 21:13:36] 2026-03-26 01:13:34,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 21:13:36] 2026-03-26 01:13:35,244 [wrapper] ==== pilot stdout END ====
[2026-03-25 21:13:36] 2026-03-26 01:13:35,296 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 21:13:36] 2026-03-26 01:13:35,314 [wrapper] pilotpid: 108152
[2026-03-25 21:13:36] 2026-03-26 01:13:35,338 [wrapper] Pilot exit status: 0
[2026-03-25 21:13:36] 2026-03-26 01:13:35,566 [wrapper] pandaids: 7056975367
[2026-03-25 21:13:36] 2026-03-26 01:13:35,813 [wrapper] cleanup supervisor_pilot 1295657 108153
[2026-03-25 21:13:36] 2026-03-26 01:13:35,818 [wrapper] Test setup, not cleaning
[2026-03-25 21:13:36] 2026-03-26 01:13:35,821 [wrapper] apfmon messages muted
[2026-03-25 21:13:36] 2026-03-26 01:13:35,823 [wrapper] ==== wrapper stdout END ====
[2026-03-25 21:13:36] 2026-03-26 01:13:35,826 [wrapper] ==== wrapper stderr END ====
[2026-03-25 21:13:36]  *** Error codes and diagnostics ***
[2026-03-25 21:13:36]     "exeErrorCode": 0,
[2026-03-25 21:13:36]     "exeErrorDiag": "",
[2026-03-25 21:13:36]     "pilotErrorCode": 0,
[2026-03-25 21:13:36]     "pilotErrorDiag": "",
[2026-03-25 21:13:36]  *** Listing of results directory ***
[2026-03-25 21:13:36] total 492896
[2026-03-25 21:13:36] -rwx------. 1 boincer umatlas     36322 Mar 16 12:43 runpilot2-wrapper.sh
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 12:45 pilot3.tar.gz
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 12:45 queuedata.json
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas       100 Mar 25 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 21:13:36] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 25 00:02 run_atlas
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas       105 Mar 25 00:02 job.xml
[2026-03-25 21:13:36] -rw-r--r--. 2 boincer umatlas 239813943 Mar 25 00:03 EVNT.49134998._000013.pool.root.1
[2026-03-25 21:13:36] -rw-r--r--. 2 boincer umatlas     15845 Mar 25 00:03 start_atlas.sh
[2026-03-25 21:13:36] drwxrwx--x. 2 boincer umatlas      4096 Mar 25 00:03 shared
[2026-03-25 21:13:36] -rw-r--r--. 2 boincer umatlas    597536 Mar 25 00:03 input.tar.gz
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas         0 Mar 25 00:03 boinc_lockfile
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas      2613 Mar 25 00:03 pandaJob.out
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas        57 Mar 25 00:03 setup.sh.local
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas   1010836 Mar 25 00:04 agis_schedconf.cvmfs.json
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas       443 Mar 25 00:05 workernode_map.json
[2026-03-25 21:13:36] drwx------. 5 boincer umatlas      4096 Mar 25 00:05 pilot3
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas 241315016 Mar 25 21:10 HITS.49181388._000310.pool.root.1
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas       531 Mar 25 21:10 boinc_task_state.xml
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas      1071 Mar 25 21:12 memory_monitor_summary.json
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas   1511579 Mar 25 21:12 agis_ddmendpoints.agis.ALL.json
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas   1186610 Mar 25 21:12 log.49181388._000310.job.log.tgz.1
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas      6400 Mar 25 21:12 heartbeat.json
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas      6878 Mar 25 21:13 init_data.xml
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas      8192 Mar 25 21:13 boinc_mmap_file
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas        29 Mar 25 21:13 wrapper_checkpoint.txt
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas        95 Mar 25 21:13 pilot_heartbeat.json
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas      5005 Mar 25 21:13 pilotlog.txt
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas   8640276 Mar 25 21:13 log.49181388._000310.job.log.1
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas       357 Mar 25 21:13 output.list
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas       620 Mar 25 21:13 runtime_log
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas   9840640 Mar 25 21:13 result.tar.gz
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas      9347 Mar 25 21:13 runtime_log.err
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas       660 Mar 25 21:13 2irKDmoDQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9UvLDmxxZn0n.diag
[2026-03-25 21:13:36] -rw-r--r--. 1 boincer umatlas     21279 Mar 25 21:13 stderr.txt
[2026-03-25 21:13:36] HITS file was successfully produced:
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas 241315016 Mar 25 21:10 shared/HITS.pool.root.1
[2026-03-25 21:13:36]  *** Contents of shared directory: ***
[2026-03-25 21:13:36] total 480076
[2026-03-25 21:13:36] -rw-r--r--. 2 boincer umatlas 239813943 Mar 25 00:03 ATLAS.root_0
[2026-03-25 21:13:36] -rw-r--r--. 2 boincer umatlas     15845 Mar 25 00:03 start_atlas.sh
[2026-03-25 21:13:36] -rw-r--r--. 2 boincer umatlas    597536 Mar 25 00:03 input.tar.gz
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas 241315016 Mar 25 21:10 HITS.pool.root.1
[2026-03-25 21:13:36] -rw-------. 1 boincer umatlas   9840640 Mar 25 21:13 result.tar.gz
21:13:38 (97781): run_atlas exited; CPU time 111011.721565
21:13:38 (97781): called boinc_finish(0)

</stderr_txt>
]]>

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