Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:32:08 (13586): wrapper (7.7.26015): starting
02:32:08 (13586): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 02:32:08] Arguments: --nthreads 8
[2026-03-25 02:32:08] Threads: 8
[2026-03-25 02:32:08] Checking for CVMFS
[2026-03-25 02:32:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 02:32:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 02:32:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 02:32:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 02:32:09] 2.11.0.0 5805 29700 78612 157665 1 11 3806243 4096001 3668 130560 13 6602041 99.768 2250623 171 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 02:32:09] CVMFS is ok
[2026-03-25 02:32:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 02:32:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 02:32:09] Further information can be found at the LHC@home message board.
[2026-03-25 02:32:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 02:32:09] Checking for apptainer binary...
[2026-03-25 02:32:09] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 02:32:09] apptainer is not installed, using version from CVMFS
[2026-03-25 02:32:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 02:32:09] WARNING: Environment variable TMPDIR already has value [/tmp/job_11389489/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node052
[2026-03-25 02:32:09] apptainer works
[2026-03-25 02:32:09] Set ATHENA_PROC_NUMBER=8
[2026-03-25 02:32:09] Set ATHENA_CORE_NUMBER=8
[2026-03-25 02:32:09] Starting ATLAS job with PandaID=7058174207
[2026-03-25 02:32:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11389489/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 04:03:42]  *** The last 200 lines of the pilot log: ***
[2026-03-25 04:03:42]  lfn=log.49182338._000080.job.log.tgz.1
[2026-03-25 04:03:42]  mtime=0
[2026-03-25 04:03:42]  protocol_id=None
[2026-03-25 04:03:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-25 04:03:42]  replicas=None
[2026-03-25 04:03:42]  scope=mc23_13p6TeV
[2026-03-25 04:03:42]  status=None
[2026-03-25 04:03:42]  status_code=0
[2026-03-25 04:03:42]  storage_token=
[2026-03-25 04:03:42]  surl=/tmp/job_11389489/atlas/pilot/slots/0/PanDA_Pilot-7058174207/log.49182338._000080.job.log.tgz.1
[2026-03-25 04:03:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/0d/log.49182338._000080.job.log.tgz.1
[2026-03-25 04:03:42]  workdir=None
[2026-03-25 04:03:42] ]
[2026-03-25 04:03:42] 2026-03-25 03:03:05,836 | INFO     | transferring file log.49182338._000080.job.log.tgz.1 from /tmp/job_11389489/atlas/pilot/slots/0/PanDA_Pilot-7058174207/log.49182338._000080.job.log.tgz.1 to /tmp/j
[2026-03-25 04:03:42] 2026-03-25 03:03:05,836 | INFO     | executing command: /usr/bin/env mv /tmp/job_11389489/atlas/pilot/slots/0/PanDA_Pilot-7058174207/log.49182338._000080.job.log.tgz.1 /tmp/job_11389489/atlas/pilot/sl
[2026-03-25 04:03:42] 2026-03-25 03:03:05,843 | INFO     | adding to output.list: log.49182338._000080.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/0d/log.49182338._000080.job.log.tg
[2026-03-25 04:03:42] 2026-03-25 03:03:05,844 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-25 04:03:42] 2026-03-25 03:03:05,844 | INFO     | summary of transferred files:
[2026-03-25 04:03:42] 2026-03-25 03:03:05,844 | INFO     |  -- lfn=log.49182338._000080.job.log.tgz.1, status_code=0, status=transferred
[2026-03-25 04:03:42] 2026-03-25 03:03:05,844 | INFO     | stage-out finished correctly
[2026-03-25 04:03:42] 2026-03-25 03:03:06,426 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-25 04:03:42] 2026-03-25 03:03:07,302 | INFO     | time since job start (5452s) is within the limit (345600.0s)
[2026-03-25 04:03:42] 2026-03-25 03:03:07,650 | INFO     | monitor loop #413: job 0:7058174207 is in state 'finished'
[2026-03-25 04:03:42] 2026-03-25 03:03:07,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-25 04:03:42] 2026-03-25 03:03:09,303 | INFO     | time since job start (5454s) is within the limit (345600.0s)
[2026-03-25 04:03:42] 2026-03-25 03:03:09,470 | INFO     | job 7058174207 has state=finished
[2026-03-25 04:03:42] 2026-03-25 03:03:09,470 | INFO     | preparing for final server update for job 7058174207 in state='finished'
[2026-03-25 04:03:42] 2026-03-25 03:03:10,044 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,044 | INFO     | reading metadata from: /tmp/job_11389489/atlas/pilot/slots/0/PanDA_Pilot-7058174207/jobReport.json
[2026-03-25 04:03:42] 2026-03-25 03:03:10,046 | INFO     | added worker_node to metadata from /tmp/job_11389489/atlas/pilot/slots/0/workernode_map.json
[2026-03-25 04:03:42] 2026-03-25 03:03:10,046 | INFO     | this job has now completed (state=finished)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,046 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,046 | INFO     | log transfer has been attempted: DONE
[2026-03-25 04:03:42] 2026-03-25 03:03:10,046 | INFO     | job 7058174207 has finished - writing final server update
[2026-03-25 04:03:42] 2026-03-25 03:03:10,046 | INFO     | total number of processed events: 400 (read)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,064 | INFO     | using path: /tmp/job_11389489/atlas/pilot/slots/0/PanDA_Pilot-7058174207/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,065 | INFO     | extracted standard info from prmon json
[2026-03-25 04:03:42] 2026-03-25 03:03:10,065 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 04:03:42] 2026-03-25 03:03:10,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 04:03:42] 2026-03-25 03:03:10,065 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 04:03:42] 2026-03-25 03:03:10,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 04:03:42] 2026-03-25 03:03:10,066 | INFO     | fitting pss+swap vs Time
[2026-03-25 04:03:42] 2026-03-25 03:03:10,066 | INFO     | sum of square deviations: 177275882.0
[2026-03-25 04:03:42] 2026-03-25 03:03:10,066 | INFO     | sum of deviations: -14193190798.999998
[2026-03-25 04:03:42] 2026-03-25 03:03:10,066 | INFO     | mean x: 1774405158.0
[2026-03-25 04:03:42] 2026-03-25 03:03:10,066 | INFO     | mean y: 2658850.9759036144
[2026-03-25 04:03:42] 2026-03-25 03:03:10,066 | INFO     | intersect: 142066377153.18542
[2026-03-25 04:03:42] 2026-03-25 03:03:10,066 | INFO     | chi2: 0.05011056729560939
[2026-03-25 04:03:42] 2026-03-25 03:03:10,066 | INFO     | current memory leak: -80.06 B/s (using 83 data points, chi2=0.05)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | could have reported an average CPU frequency of 2786 MHz (7 samples)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | ..............................
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | . Timing measurements:
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | . get job = 0 s
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | . initial setup = 2 s
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | . payload setup = 3 s
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | . stage-in = 0 s
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | . payload execution = 5431 s
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | . stage-out = 0 s
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | . log creation = 0 s
[2026-03-25 04:03:42] 2026-03-25 03:03:10,067 | INFO     | ..............................
[2026-03-25 04:03:42] 2026-03-25 03:03:10,426 | INFO     | PID=17413 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 04:03:42] 2026-03-25 03:03:10,426 | INFO     | .. there are 3 such processes running
[2026-03-25 04:03:42] 2026-03-25 03:03:10,578 | INFO     | 
[2026-03-25 04:03:42] 2026-03-25 03:03:10,578 | INFO     | job summary report
[2026-03-25 04:03:42] 2026-03-25 03:03:10,578 | INFO     | --------------------------------------------------
[2026-03-25 04:03:42] 2026-03-25 03:03:10,578 | INFO     | PanDA job id: 7058174207
[2026-03-25 04:03:42] 2026-03-25 03:03:10,578 | INFO     | task id: 49182338
[2026-03-25 04:03:42] 2026-03-25 03:03:10,578 | INFO     | errors: (none)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,578 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 04:03:42] 2026-03-25 03:03:10,578 | INFO     | pilot state: finished 
[2026-03-25 04:03:42] 2026-03-25 03:03:10,578 | INFO     | transexitcode: 0
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | exeerrorcode: 0
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | exeerrordiag: 
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | exitcode: 0
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | exitmsg: OK
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | cpuconsumptiontime: 38484 s
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | nevents: 400
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | neventsw: 0
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | pid: 21972
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | pgrp: 21972
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | corecount: 8
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | event service: False
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | sizes: {0: 2280454, 11: 2280454, 5438: 2307229, 5439: 2316312, 5440: 2316312, 5443: 2316506}
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | --------------------------------------------------
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | 
[2026-03-25 04:03:42] 2026-03-25 03:03:10,579 | INFO     | executing command: ls -lF /tmp/job_11389489/atlas/pilot/slots/0
[2026-03-25 04:03:42] 2026-03-25 03:03:10,588 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,588 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,588 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,588 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | job 7058174207 has completed (purged errors)
[2026-03-25 04:03:42] 2026-03-25 03:03:10,589 | INFO     | overall cleanup function is called
[2026-03-25 04:03:42] 2026-03-25 03:03:11,595 | INFO     | --- collectZombieJob: --- 10, [21972]
[2026-03-25 04:03:42] 2026-03-25 03:03:11,595 | INFO     | zombie collector waiting for pid 21972
[2026-03-25 04:03:42] 2026-03-25 03:03:11,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 04:03:42] 2026-03-25 03:03:11,595 | INFO     | collected zombie processes
[2026-03-25 04:03:42] 2026-03-25 03:03:11,595 | INFO     | will attempt to kill all subprocesses of pid=21972
[2026-03-25 04:03:42] 2026-03-25 03:03:11,693 | INFO     | process IDs to be killed: [21972] (in reverse order)
[2026-03-25 04:03:42] 2026-03-25 03:03:11,727 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 04:03:42] 2026-03-25 03:03:11,727 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 04:03:42] 2026-03-25 03:03:11,730 | INFO     | did not find any defunct processes belonging to 21972
[2026-03-25 04:03:42] 2026-03-25 03:03:11,733 | INFO     | did not find any defunct processes belonging to 21972
[2026-03-25 04:03:42] 2026-03-25 03:03:11,734 | INFO     | ready for new job
[2026-03-25 04:03:42] 2026-03-25 03:03:11,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 04:03:42] 2026-03-25 03:03:11,734 | INFO     | **************************************
[2026-03-25 04:03:42] 2026-03-25 03:03:11,734 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 04:03:42] 2026-03-25 03:03:11,734 | INFO     | **************************************
[2026-03-25 04:03:42] 2026-03-25 03:03:11,734 | INFO     | 
[2026-03-25 04:03:42] 2026-03-25 03:03:11,748 | INFO     | architecture information:
[2026-03-25 04:03:42] 2026-03-25 03:03:11,748 | INFO     | executing command: cat /etc/os-release
[2026-03-25 04:03:42] 2026-03-25 03:03:11,754 | INFO     | cat /etc/os-release:
[2026-03-25 04:03:42] NAME="CentOS Linux"
[2026-03-25 04:03:42] VERSION="7 (Core)"
[2026-03-25 04:03:42] ID="centos"
[2026-03-25 04:03:42] ID_LIKE="rhel fedora"
[2026-03-25 04:03:42] VERSION_ID="7"
[2026-03-25 04:03:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 04:03:42] ANSI_COLOR="0;31"
[2026-03-25 04:03:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 04:03:42] HOME_URL="https://www.centos.org/"
[2026-03-25 04:03:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 04:03:42] 
[2026-03-25 04:03:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 04:03:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 04:03:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 04:03:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 04:03:42] 
[2026-03-25 04:03:42] 2026-03-25 03:03:11,754 | INFO     | **************************************
[2026-03-25 04:03:42] 2026-03-25 03:03:12,257 | INFO     | executing command: df -mP /tmp/job_11389489/atlas/pilot/slots/0
[2026-03-25 04:03:42] 2026-03-25 03:03:12,262 | INFO     | sufficient remaining disk space (224788480000 B)
[2026-03-25 04:03:42] 2026-03-25 03:03:12,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 04:03:42] 2026-03-25 03:03:12,263 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 04:03:42] 2026-03-25 03:03:12,263 | INFO     | update_server=False
[2026-03-25 04:03:42] 2026-03-25 03:03:12,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 04:03:42] 2026-03-25 03:03:12,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 04:03:42] 2026-03-25 03:03:12,409 | INFO     | all job control threads have been joined
[2026-03-25 04:03:42] 2026-03-25 03:03:12,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 04:03:42] 2026-03-25 03:03:12,655 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 04:03:42] 2026-03-25 03:03:12,655 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 04:03:42] 2026-03-25 03:03:12,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 04:03:42] 2026-03-25 03:03:12,656 | INFO     | will abort loop
[2026-03-25 04:03:42] 2026-03-25 03:03:13,032 | INFO     | all data control threads have been joined
[2026-03-25 04:03:42] 2026-03-25 03:03:13,268 | INFO     | [job] retrieve thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:13,405 | INFO     | [data] copytool_in thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:13,414 | INFO     | [job] control thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:13,505 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:13,612 | INFO     | all payload control threads have been joined
[2026-03-25 04:03:42] 2026-03-25 03:03:13,612 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:13,661 | INFO     | [job] job monitor thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:13,688 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:13,932 | INFO     | [payload] failed_post thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:14,037 | INFO     | [data] control thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:14,268 | INFO     | [data] copytool_out thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:14,467 | INFO     | [payload] validate_post thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:14,617 | INFO     | [payload] control thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:14,694 | INFO     | [job] validate thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:15,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 04:03:42] 2026-03-25 03:03:16,130 | INFO     | [job] queue monitor thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:16,484 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:23,227 | INFO     | job.realtimelogging is not enabled
[2026-03-25 04:03:42] 2026-03-25 03:03:24,002 | INFO     | [monitor] cgroup control has ended
[2026-03-25 04:03:42] 2026-03-25 03:03:24,232 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 04:03:42] 2026-03-25 03:03:24,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-25 04:03:42] 2026-03-25 03:03:29,627 | INFO     | all workflow threads have been joined
[2026-03-25 04:03:42] 2026-03-25 03:03:29,627 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 04:03:42] 2026-03-25 03:03:29,627 | INFO     | traces error code: 0
[2026-03-25 04:03:42] 2026-03-25 03:03:29,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 04:03:42] 2026-03-25 03:03:42,610 | INFO     | PID=17413 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 04:03:42] 2026-03-25 03:03:42,610 | INFO     | .. there are 3 such processes running
[2026-03-25 04:03:42] 2026-03-25 03:03:42,610 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 04:03:42] 2026-03-25 03:03:42,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 04:03:42] 2026-03-25 03:03:42,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 04:03:42] 2026-03-25 03:03:42,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 04:03:42] 2026-03-25 03:03:42,611 | INFO     | [monitor] control thread has ended
[2026-03-25 04:03:42] 2026-03-25 03:03:42,666 [wrapper] ==== pilot stdout END ====
[2026-03-25 04:03:42] 2026-03-25 03:03:42,668 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 04:03:42] 2026-03-25 03:03:42,669 [wrapper] pilotpid: 17413
[2026-03-25 04:03:42] 2026-03-25 03:03:42,670 [wrapper] Pilot exit status: 0
[2026-03-25 04:03:42] 2026-03-25 03:03:42,675 [wrapper] pandaids: 7058174207
[2026-03-25 04:03:42] 2026-03-25 03:03:42,698 [wrapper] cleanup supervisor_pilot  7337 17414
[2026-03-25 04:03:42] 2026-03-25 03:03:42,699 [wrapper] Test setup, not cleaning
[2026-03-25 04:03:42] 2026-03-25 03:03:42,700 [wrapper] apfmon messages muted
[2026-03-25 04:03:42] 2026-03-25 03:03:42,702 [wrapper] ==== wrapper stdout END ====
[2026-03-25 04:03:42] 2026-03-25 03:03:42,703 [wrapper] ==== wrapper stderr END ====
[2026-03-25 04:03:42]  *** Error codes and diagnostics ***
[2026-03-25 04:03:42]     "exeErrorCode": 0,
[2026-03-25 04:03:42]     "exeErrorDiag": "",
[2026-03-25 04:03:42]     "pilotErrorCode": 0,
[2026-03-25 04:03:42]     "pilotErrorDiag": "",
[2026-03-25 04:03:42]  *** Listing of results directory ***
[2026-03-25 04:03:42] total 460352
[2026-03-25 04:03:42] -rwx------ 1 mf493845 unix-user     36322 Mar 22 05:26 runpilot2-wrapper.sh
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user    585013 Mar 22 05:28 pilot3.tar.gz
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user      5111 Mar 23 23:40 queuedata.json
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user       100 Mar 25 01:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 04:03:42] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 25 01:29 run_atlas
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user       105 Mar 25 01:29 job.xml
[2026-03-25 04:03:42] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 02:32 start_atlas.sh
[2026-03-25 04:03:42] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 02:32 shared
[2026-03-25 04:03:42] -rw-r--r-- 2 mf493845 unix-user    597550 Mar 25 02:32 input.tar.gz
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user      6390 Mar 25 02:32 init_data.xml
[2026-03-25 04:03:42] -rw-r--r-- 2 mf493845 unix-user 245511698 Mar 25 02:32 EVNT.49136781._000004.pool.root.1
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user         0 Mar 25 02:32 boinc_setup_complete
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user      8192 Mar 25 02:32 boinc_mmap_file
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user         0 Mar 25 02:32 boinc_lockfile
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user      2633 Mar 25 02:32 pandaJob.out
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user   1010844 Mar 25 02:32 agis_schedconf.cvmfs.json
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user   1511579 Mar 25 02:32 agis_ddmendpoints.agis.ALL.json
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user       420 Mar 25 02:32 workernode_map.json
[2026-03-25 04:03:42] drwx------ 5 mf493845 unix-user       440 Mar 25 02:32 pilot3
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user 219684145 Mar 25 04:02 HITS.49182338._000080.pool.root.1
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user      1023 Mar 25 04:03 memory_monitor_summary.json
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user    328276 Mar 25 04:03 log.49182338._000080.job.log.tgz.1
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user      6313 Mar 25 04:03 heartbeat.json
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user       820 Mar 25 04:03 pilotlog.txt
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user        95 Mar 25 04:03 pilot_heartbeat.json
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user    817233 Mar 25 04:03 log.49182338._000080.job.log.1
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user       357 Mar 25 04:03 output.list
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user       620 Mar 25 04:03 runtime_log
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user   1167360 Mar 25 04:03 result.tar.gz
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user      9219 Mar 25 04:03 runtime_log.err
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user       645 Mar 25 04:03 JnTLDm0ZPO9n9Rq4apOajLDm4fhM0noT9bVooX4SDm56zLDmkEZEWo.diag
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user     22194 Mar 25 04:03 stderr.txt
[2026-03-25 04:03:42] HITS file was successfully produced:
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user 219684145 Mar 25 04:02 shared/HITS.pool.root.1
[2026-03-25 04:03:42]  *** Contents of shared directory: ***
[2026-03-25 04:03:42] total 456036
[2026-03-25 04:03:42] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 02:32 start_atlas.sh
[2026-03-25 04:03:42] -rw-r--r-- 2 mf493845 unix-user    597550 Mar 25 02:32 input.tar.gz
[2026-03-25 04:03:42] -rw-r--r-- 2 mf493845 unix-user 245511698 Mar 25 02:32 ATLAS.root_0
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user 219684145 Mar 25 04:02 HITS.pool.root.1
[2026-03-25 04:03:42] -rw------- 1 mf493845 unix-user   1167360 Mar 25 04:03 result.tar.gz
04:03:43 (13586): run_atlas exited; CPU time 38559.478348
04:03:43 (13586): called boinc_finish(0)

</stderr_txt>
]]>

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