Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:00:30 (3083375): wrapper (7.7.26015): starting
08:00:30 (3083375): wrapper: running run_atlas (--nthreads 12)
[2026-03-25 08:00:30] Arguments: --nthreads 12
[2026-03-25 08:00:30] Threads: 12
[2026-03-25 08:00:30] Checking for CVMFS
[2026-03-25 08:00:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 08:00:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 08:00:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 08:00:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 08:00:33] 2.13.3.0 457464 13429 267768 157673 3 195 44790783 46080001 8306 130560 0 53635375 99.910 11847871 25828 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-25 08:00:33] CVMFS is ok
[2026-03-25 08:00:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 08:00:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 08:00:33] Further information can be found at the LHC@home message board.
[2026-03-25 08:00:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 08:00:33] Checking for apptainer binary...
[2026-03-25 08:00:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 08:00:33] Running /usr/bin/apptainer --version
[2026-03-25 08:00:33] apptainer version 1.4.5-3.el9
[2026-03-25 08:00:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 08:00:34] mff2104.farm.particle.cz
[2026-03-25 08:00:34] apptainer works
[2026-03-25 08:00:34] Set ATHENA_PROC_NUMBER=12
[2026-03-25 08:00:34] Set ATHENA_CORE_NUMBER=12
[2026-03-25 08:00:34] Starting ATLAS job with PandaID=7049157412
[2026-03-25 08:00:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 10:28:58]  *** The last 200 lines of the pilot log: ***
[2026-03-25 10:28:58] 2026-03-25 09:28:24,170 | INFO     | sum of square deviations: 729472282.0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,171 | INFO     | sum of deviations: 93517593788.00002
[2026-03-25 10:28:58] 2026-03-25 09:28:24,171 | INFO     | mean x: 1774426523.0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,171 | INFO     | mean y: 2525375.3082706765
[2026-03-25 10:28:58] 2026-03-25 09:28:24,171 | INFO     | intersect: -227477123789.1644
[2026-03-25 10:28:58] 2026-03-25 09:28:24,172 | INFO     | chi2: 11.76907930630426
[2026-03-25 10:28:58] 2026-03-25 09:28:24,172 | INFO     | current chi2=11.76907930630426 (change=5.377380304291263 %)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,172 | INFO     | right removable region: 132
[2026-03-25 10:28:58] 2026-03-25 09:28:24,172 | INFO     | sum of square deviations: 729472282.0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,173 | INFO     | sum of deviations: 33730092190.999973
[2026-03-25 10:28:58] 2026-03-25 09:28:24,173 | INFO     | mean x: 1774426828.0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,173 | INFO     | mean y: 2607434.082706767
[2026-03-25 10:28:58] 2026-03-25 09:28:24,173 | INFO     | intersect: -82045171448.65715
[2026-03-25 10:28:58] 2026-03-25 09:28:24,173 | INFO     | chi2: 5.847058111191436
[2026-03-25 10:28:58] 2026-03-25 09:28:24,173 | INFO     | current chi2=5.847058111191436 (change=52.99003927200887 %)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,174 | INFO     | sum of square deviations: 650252192.0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,174 | INFO     | sum of deviations: -9861751080.5
[2026-03-25 10:28:58] 2026-03-25 09:28:24,174 | INFO     | mean x: 1774426980.5
[2026-03-25 10:28:58] 2026-03-25 09:28:24,174 | INFO     | mean y: 2691229.0390625
[2026-03-25 10:28:58] 2026-03-25 09:28:24,174 | INFO     | intersect: 26913722683.45395
[2026-03-25 10:28:58] 2026-03-25 09:28:24,175 | INFO     | chi2: 1.8997568590269367
[2026-03-25 10:28:58] 2026-03-25 09:28:24,175 | INFO     | current chi2=1.8997568590269367 (change=67.50918456940342 %)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,175 | INFO     | sum of square deviations: 576985702.0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,175 | INFO     | sum of deviations: -28179114761.0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,176 | INFO     | mean x: 1774427133.0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,176 | INFO     | mean y: 2728956.9186991868
[2026-03-25 10:28:58] 2026-03-25 09:28:24,176 | INFO     | intersect: 86663084044.60718
[2026-03-25 10:28:58] 2026-03-25 09:28:24,176 | INFO     | chi2: 1.0233358564098889
[2026-03-25 10:28:58] 2026-03-25 09:28:24,176 | INFO     | current chi2=1.0233358564098889 (change=46.133324822733066 %)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,176 | INFO     | sum of square deviations: 509440249.5
[2026-03-25 10:28:58] 2026-03-25 09:28:24,177 | INFO     | sum of deviations: -30886432804.000015
[2026-03-25 10:28:58] 2026-03-25 09:28:24,177 | INFO     | mean x: 1774427285.5
[2026-03-25 10:28:58] 2026-03-25 09:28:24,177 | INFO     | mean y: 2734895.559322034
[2026-03-25 10:28:58] 2026-03-25 09:28:24,177 | INFO     | intersect: 107583023600.60382
[2026-03-25 10:28:58] 2026-03-25 09:28:24,177 | INFO     | chi2: 0.9476491185560211
[2026-03-25 10:28:58] 2026-03-25 09:28:24,178 | INFO     | current chi2=0.9476491185560211 (change=7.396079926232166 %)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,178 | INFO     | left removable region: 40
[2026-03-25 10:28:58] 2026-03-25 09:28:24,178 | INFO     | sum of square deviations: 241429643.0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,178 | INFO     | sum of deviations: -8123506731.5
[2026-03-25 10:28:58] 2026-03-25 09:28:24,178 | INFO     | mean x: 1774427712.5
[2026-03-25 10:28:58] 2026-03-25 09:28:24,178 | INFO     | mean y: 2719633.2065217393
[2026-03-25 10:28:58] 2026-03-25 09:28:24,179 | INFO     | intersect: 59707796805.746994
[2026-03-25 10:28:58] 2026-03-25 09:28:24,179 | INFO     | chi2: 0.04430411194788018
[2026-03-25 10:28:58] 2026-03-25 09:28:24,179 | INFO     | current memory leak: -33.65 B/s (using 92 data points, chi2=0.04)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,179 | INFO     | could have reported an average CPU frequency of 2734 MHz (8 samples)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,179 | INFO     | ..............................
[2026-03-25 10:28:58] 2026-03-25 09:28:24,180 | INFO     | . Timing measurements:
[2026-03-25 10:28:58] 2026-03-25 09:28:24,180 | INFO     | . get job = 0 s
[2026-03-25 10:28:58] 2026-03-25 09:28:24,180 | INFO     | . initial setup = 53 s
[2026-03-25 10:28:58] 2026-03-25 09:28:24,180 | INFO     | . payload setup = 245 s
[2026-03-25 10:28:58] 2026-03-25 09:28:24,180 | INFO     | . stage-in = 0 s
[2026-03-25 10:28:58] 2026-03-25 09:28:24,180 | INFO     | . payload execution = 8442 s
[2026-03-25 10:28:58] 2026-03-25 09:28:24,180 | INFO     | . stage-out = 1 s
[2026-03-25 10:28:58] 2026-03-25 09:28:24,180 | INFO     | . log creation = 0 s
[2026-03-25 10:28:58] 2026-03-25 09:28:24,180 | INFO     | ..............................
[2026-03-25 10:28:58] 2026-03-25 09:28:24,459 | INFO     | PID=3090323 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-25 10:28:58] 2026-03-25 09:28:24,459 | INFO     | .. there are 8 such processes running
[2026-03-25 10:28:58] 2026-03-25 09:28:24,533 | WARNING  | process 3112573 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 10:28:58] 2026-03-25 09:28:24,533 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-7049157412/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,534 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-7049157412/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,534 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-25 10:28:58] 2026-03-25 09:28:24,534 | WARNING  | maxPSS not found in memory monitor output
[2026-03-25 10:28:58] 2026-03-25 09:28:24,717 | INFO     | 
[2026-03-25 10:28:58] 2026-03-25 09:28:24,717 | INFO     | job summary report
[2026-03-25 10:28:58] 2026-03-25 09:28:24,717 | INFO     | --------------------------------------------------
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | PanDA job id: 7049157412
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | task id: 48967085
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | errors: (none)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | pilot state: finished 
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | transexitcode: 0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | exeerrorcode: 0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | exeerrordiag: 
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | exitcode: 0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | exitmsg: OK
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | cpuconsumptiontime: 46897 s
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | nevents: 400
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | neventsw: 0
[2026-03-25 10:28:58] 2026-03-25 09:28:24,718 | INFO     | pid: 3112573
[2026-03-25 10:28:58] 2026-03-25 09:28:24,719 | INFO     | pgrp: 3112573
[2026-03-25 10:28:58] 2026-03-25 09:28:24,719 | INFO     | corecount: 12
[2026-03-25 10:28:58] 2026-03-25 09:28:24,719 | INFO     | event service: False
[2026-03-25 10:28:58] 2026-03-25 09:28:24,719 | INFO     | sizes: {0: 2279749, 1: 2265826, 2: 2280266, 12: 2280294, 8692: 2308596, 8695: 2317780, 8697: 2317918}
[2026-03-25 10:28:58] 2026-03-25 09:28:24,719 | INFO     | --------------------------------------------------
[2026-03-25 10:28:58] 2026-03-25 09:28:24,719 | INFO     | 
[2026-03-25 10:28:58] 2026-03-25 09:28:24,719 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2026-03-25 10:28:58] 2026-03-25 09:28:24,855 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | job 7049157412 has completed (purged errors)
[2026-03-25 10:28:58] 2026-03-25 09:28:24,857 | INFO     | overall cleanup function is called
[2026-03-25 10:28:58] 2026-03-25 09:28:25,067 | INFO     | number of running child processes to parent process 3112573: 1
[2026-03-25 10:28:58] 2026-03-25 09:28:25,067 | INFO     | maximum number of monitored processes: 7
[2026-03-25 10:28:58] 2026-03-25 09:28:25,067 | INFO     | aborting job monitoring since job object (job id=7049157412) has expired
[2026-03-25 10:28:58] 2026-03-25 09:28:25,888 | INFO     | --- collectZombieJob: --- 10, [3112573]
[2026-03-25 10:28:58] 2026-03-25 09:28:25,888 | INFO     | zombie collector waiting for pid 3112573
[2026-03-25 10:28:58] 2026-03-25 09:28:25,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 10:28:58] 2026-03-25 09:28:25,889 | INFO     | collected zombie processes
[2026-03-25 10:28:58] 2026-03-25 09:28:25,889 | INFO     | will attempt to kill all subprocesses of pid=3112573
[2026-03-25 10:28:58] 2026-03-25 09:28:26,531 | INFO     | process IDs to be killed: [3112573] (in reverse order)
[2026-03-25 10:28:58] 2026-03-25 09:28:27,120 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 10:28:58] 2026-03-25 09:28:27,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 10:28:58] 2026-03-25 09:28:27,139 | INFO     | did not find any defunct processes belonging to 3112573
[2026-03-25 10:28:58] 2026-03-25 09:28:27,161 | INFO     | did not find any defunct processes belonging to 3112573
[2026-03-25 10:28:58] 2026-03-25 09:28:27,161 | INFO     | ready for new job
[2026-03-25 10:28:58] 2026-03-25 09:28:27,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 10:28:58] 2026-03-25 09:28:27,163 | INFO     | **************************************
[2026-03-25 10:28:58] 2026-03-25 09:28:27,163 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 10:28:58] 2026-03-25 09:28:27,164 | INFO     | **************************************
[2026-03-25 10:28:58] 2026-03-25 09:28:27,164 | INFO     | 
[2026-03-25 10:28:58] 2026-03-25 09:28:27,170 | INFO     | architecture information:
[2026-03-25 10:28:58] 2026-03-25 09:28:27,173 | INFO     | executing command: cat /etc/os-release
[2026-03-25 10:28:58] 2026-03-25 09:28:27,284 | INFO     | cat /etc/os-release:
[2026-03-25 10:28:58] NAME="CentOS Linux"
[2026-03-25 10:28:58] VERSION="7 (Core)"
[2026-03-25 10:28:58] ID="centos"
[2026-03-25 10:28:58] ID_LIKE="rhel fedora"
[2026-03-25 10:28:58] VERSION_ID="7"
[2026-03-25 10:28:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 10:28:58] ANSI_COLOR="0;31"
[2026-03-25 10:28:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 10:28:58] HOME_URL="https://www.centos.org/"
[2026-03-25 10:28:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 10:28:58] 
[2026-03-25 10:28:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 10:28:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 10:28:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 10:28:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 10:28:58] 
[2026-03-25 10:28:58] 2026-03-25 09:28:27,285 | INFO     | **************************************
[2026-03-25 10:28:58] 2026-03-25 09:28:27,788 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2026-03-25 10:28:58] 2026-03-25 09:28:27,880 | INFO     | sufficient remaining disk space (1590748512256 B)
[2026-03-25 10:28:58] 2026-03-25 09:28:27,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 10:28:58] 2026-03-25 09:28:27,880 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 10:28:58] 2026-03-25 09:28:27,880 | INFO     | update_server=False
[2026-03-25 10:28:58] 2026-03-25 09:28:27,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 10:28:58] 2026-03-25 09:28:27,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 10:28:58] 2026-03-25 09:28:28,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 10:28:58] 2026-03-25 09:28:28,583 | INFO     | aborting loop
[2026-03-25 10:28:58] 2026-03-25 09:28:28,887 | INFO     | [job] retrieve thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:28,908 | INFO     | all data control threads have been joined
[2026-03-25 10:28:58] 2026-03-25 09:28:29,091 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 10:28:58] 2026-03-25 09:28:29,120 | INFO     | all payload control threads have been joined
[2026-03-25 10:28:58] 2026-03-25 09:28:29,184 | INFO     | all job control threads have been joined
[2026-03-25 10:28:58] 2026-03-25 09:28:29,270 | INFO     | [monitor] cgroup control has ended
[2026-03-25 10:28:58] 2026-03-25 09:28:29,342 | INFO     | [data] copytool_in thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:29,350 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:29,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 10:28:58] 2026-03-25 09:28:29,589 | INFO     | [job] job monitor thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:29,710 | INFO     | [job] validate thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:29,865 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:29,888 | INFO     | [data] copytool_out thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:29,914 | INFO     | [data] control thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:30,029 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:30,112 | INFO     | [payload] validate_post thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:30,126 | INFO     | [payload] control thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:30,175 | INFO     | [payload] failed_post thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:30,190 | INFO     | [job] control thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:30,237 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:30,449 | INFO     | [job] queue monitor thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:33,098 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 10:28:58] 2026-03-25 09:28:34,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486928377664)>', '<ExcThread(monitor, started 140486568310528)>']
[2026-03-25 10:28:58] 2026-03-25 09:28:39,749 | INFO     | all workflow threads have been joined
[2026-03-25 10:28:58] 2026-03-25 09:28:39,750 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 10:28:58] 2026-03-25 09:28:39,750 | INFO     | traces error code: 0
[2026-03-25 10:28:58] 2026-03-25 09:28:39,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 10:28:58] 2026-03-25 09:28:57,123 | INFO     | PID=3090323 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 10:28:58] 2026-03-25 09:28:57,123 | INFO     | .. there are 8 such processes running
[2026-03-25 10:28:58] 2026-03-25 09:28:57,124 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 10:28:58] 2026-03-25 09:28:57,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 10:28:58] 2026-03-25 09:28:57,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 10:28:58] 2026-03-25 09:28:57,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 10:28:58] 2026-03-25 09:28:57,124 | INFO     | [monitor] control thread has ended
[2026-03-25 10:28:58] 2026-03-25 09:28:57,397 [wrapper] ==== pilot stdout END ====
[2026-03-25 10:28:58] 2026-03-25 09:28:57,411 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 10:28:58] 2026-03-25 09:28:57,420 [wrapper] pilotpid: 3090323
[2026-03-25 10:28:58] 2026-03-25 09:28:57,437 [wrapper] Pilot exit status: 0
[2026-03-25 10:28:58] 2026-03-25 09:28:57,535 [wrapper] pandaids: 7049157412
[2026-03-25 10:28:58] 2026-03-25 09:28:57,915 [wrapper] cleanup supervisor_pilot 3420648 3090324
[2026-03-25 10:28:58] 2026-03-25 09:28:57,954 [wrapper] Test setup, not cleaning
[2026-03-25 10:28:58] 2026-03-25 09:28:57,993 [wrapper] apfmon messages muted
[2026-03-25 10:28:58] 2026-03-25 09:28:58,030 [wrapper] ==== wrapper stdout END ====
[2026-03-25 10:28:58] 2026-03-25 09:28:58,075 [wrapper] ==== wrapper stderr END ====
[2026-03-25 10:28:58]  *** Error codes and diagnostics ***
[2026-03-25 10:28:58]     "exeErrorCode": 0,
[2026-03-25 10:28:58]     "exeErrorDiag": "",
[2026-03-25 10:28:58]     "pilotErrorCode": 0,
[2026-03-25 10:28:58]     "pilotErrorDiag": "",
[2026-03-25 10:28:58]  *** Listing of results directory ***
[2026-03-25 10:28:58] total 409744
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc      5111 Mar 10 19:09 queuedata.json
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc    585013 Mar 10 19:10 pilot3.tar.gz
[2026-03-25 10:28:58] -rwx------ 1 boinc boinc     36322 Mar 10 19:10 runpilot2-wrapper.sh
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc       100 Mar 25 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 10:28:58] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 08:00 run_atlas
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc       105 Mar 25 08:00 job.xml
[2026-03-25 10:28:58] -rw-r--r-- 2 boinc boinc 215131572 Mar 25 08:00 EVNT.48967083._000086.pool.root.1
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc      6677 Mar 25 08:00 init_data.xml
[2026-03-25 10:28:58] -rw-r--r-- 2 boinc boinc     15845 Mar 25 08:00 start_atlas.sh
[2026-03-25 10:28:58] drwxrwx--x 2 boinc boinc      4096 Mar 25 08:00 shared
[2026-03-25 10:28:58] -rw-r--r-- 2 boinc boinc    597512 Mar 25 08:00 input.tar.gz
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc         0 Mar 25 08:00 boinc_lockfile
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc      2561 Mar 25 08:00 pandaJob.out
[2026-03-25 10:28:58] -rw------- 1 boinc boinc   1010852 Mar 25 08:02 agis_schedconf.cvmfs.json
[2026-03-25 10:28:58] -rw------- 1 boinc boinc   1511579 Mar 25 08:02 agis_ddmendpoints.agis.ALL.json
[2026-03-25 10:28:58] -rw------- 1 boinc boinc       436 Mar 25 08:03 workernode_map.json
[2026-03-25 10:28:58] drwx------ 5 boinc boinc      4096 Mar 25 08:03 pilot3
[2026-03-25 10:28:58] -rw------- 1 boinc boinc 197183304 Mar 25 10:27 HITS.48967085._002141.pool.root.1
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc       529 Mar 25 10:27 boinc_task_state.xml
[2026-03-25 10:28:58] -rw------- 1 boinc boinc      1025 Mar 25 10:28 memory_monitor_summary.json
[2026-03-25 10:28:58] -rw------- 1 boinc boinc    447014 Mar 25 10:28 log.48967085._002141.job.log.tgz.1
[2026-03-25 10:28:58] -rw------- 1 boinc boinc      6346 Mar 25 10:28 heartbeat.json
[2026-03-25 10:28:58] -rw------- 1 boinc boinc        95 Mar 25 10:28 pilot_heartbeat.json
[2026-03-25 10:28:58] -rw------- 1 boinc boinc       822 Mar 25 10:28 pilotlog.txt
[2026-03-25 10:28:58] -rw------- 1 boinc boinc   1213130 Mar 25 10:28 log.48967085._002141.job.log.1
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc      8192 Mar 25 10:28 boinc_mmap_file
[2026-03-25 10:28:58] -rw------- 1 boinc boinc       357 Mar 25 10:28 output.list
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc       620 Mar 25 10:28 runtime_log
[2026-03-25 10:28:58] -rw------- 1 boinc boinc   1679360 Mar 25 10:28 result.tar.gz
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc        26 Mar 25 10:28 wrapper_checkpoint.txt
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc      8879 Mar 25 10:28 runtime_log.err
[2026-03-25 10:28:58] -rw------- 1 boinc boinc       664 Mar 25 10:28 hvZKDmLiGK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmC5dLDmolF6Sn.diag
[2026-03-25 10:28:58] -rw-r--r-- 1 boinc boinc     21367 Mar 25 10:28 stderr.txt
[2026-03-25 10:28:58] HITS file was successfully produced:
[2026-03-25 10:28:58] -rw------- 1 boinc boinc 197183304 Mar 25 10:27 shared/HITS.pool.root.1
[2026-03-25 10:28:58]  *** Contents of shared directory: ***
[2026-03-25 10:28:58] total 404904
[2026-03-25 10:28:58] -rw-r--r-- 2 boinc boinc 215131572 Mar 25 08:00 ATLAS.root_0
[2026-03-25 10:28:58] -rw-r--r-- 2 boinc boinc     15845 Mar 25 08:00 start_atlas.sh
[2026-03-25 10:28:58] -rw-r--r-- 2 boinc boinc    597512 Mar 25 08:00 input.tar.gz
[2026-03-25 10:28:58] -rw------- 1 boinc boinc 197183304 Mar 25 10:27 HITS.pool.root.1
[2026-03-25 10:28:58] -rw------- 1 boinc boinc   1679360 Mar 25 10:28 result.tar.gz
10:29:00 (3083375): run_atlas exited; CPU time 47260.825512
10:29:00 (3083375): called boinc_finish(0)

</stderr_txt>
]]>

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