Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:35:58 (1958051): wrapper (7.7.26015): starting
18:35:58 (1958051): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 18:35:58] Arguments: --nthreads 8
[2026-03-24 18:35:58] Threads: 8
[2026-03-24 18:35:58] Checking for CVMFS
[2026-03-24 18:35:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 18:35:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 18:35:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 18:36:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 18:36:20] 2.13.3.0 12357 200531 378764 157660 3 531 31168004 32503809 62889 16776704 0 2704847727 99.641 2494273566 46072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-24 18:36:20] CVMFS is ok
[2026-03-24 18:36:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 18:36:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 18:36:20] Further information can be found at the LHC@home message board.
[2026-03-24 18:36:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 18:36:20] Checking for apptainer binary...
[2026-03-24 18:36:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 18:36:20] Running /usr/bin/apptainer --version
[2026-03-24 18:36:20] apptainer version 1.4.5-2.el9
[2026-03-24 18:36:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 18:36:21] c8-7-2.aglt2.org
[2026-03-24 18:36:21] apptainer works
[2026-03-24 18:36:21] Set ATHENA_PROC_NUMBER=8
[2026-03-24 18:36:21] Set ATHENA_CORE_NUMBER=8
[2026-03-24 18:36:21] Starting ATLAS job with PandaID=7056930895
[2026-03-24 18:36:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:05 (1958051): BOINC client no longer exists - exiting
00:20:05 (1958051): timer handler: client dead, exiting
00:22:19 (3625448): wrapper (7.7.26015): starting
00:22:19 (3625448): wrapper: running run_atlas (--nthreads 9)
[2026-03-25 00:22:19] Arguments: --nthreads 9
[2026-03-25 00:22:19] Threads: 9
[2026-03-25 00:22:19] This job has been restarted, cleaning up previous attempt
[2026-03-25 00:22:19] Checking for CVMFS
[2026-03-25 00:22:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 00:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 00:22:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 00:22:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 00:22:20] 2.13.3.0 12357 200877 360956 157670 2 283 29946630 32503808 63812 16776704 0 2714336074 99.642 2496738646 46040 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-25 00:22:20] CVMFS is ok
[2026-03-25 00:22:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 00:22:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 00:22:20] Further information can be found at the LHC@home message board.
[2026-03-25 00:22:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 00:22:20] Checking for apptainer binary...
[2026-03-25 00:22:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 00:22:21] Running /usr/bin/apptainer --version
[2026-03-25 00:22:21] apptainer version 1.4.5-2.el9
[2026-03-25 00:22:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 00:22:22] c8-7-2.aglt2.org
[2026-03-25 00:22:22] apptainer works
[2026-03-25 00:22:22] Set ATHENA_PROC_NUMBER=9
[2026-03-25 00:22:22] Set ATHENA_CORE_NUMBER=9
[2026-03-25 00:22:22] Starting ATLAS job with PandaID=7056930895
[2026-03-25 00:22:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 10:42:25]  *** The last 200 lines of the pilot log: ***
[2026-03-25 10:42:25] 2026-03-25 14:41:24,308 | INFO     | sum of deviations: 183164801218.7052
[2026-03-25 10:42:25] 2026-03-25 14:41:24,308 | INFO     | mean x: 1774431149.00659
[2026-03-25 10:42:25] 2026-03-25 14:41:24,308 | INFO     | mean y: 2552624.823723229
[2026-03-25 10:42:25] 2026-03-25 14:41:24,308 | INFO     | intersect: -4684052372.032891
[2026-03-25 10:42:25] 2026-03-25 14:41:24,309 | INFO     | chi2: 1.6165891893018849
[2026-03-25 10:42:25] 2026-03-25 14:41:24,309 | INFO     | sum of square deviations: 67649750090.47353
[2026-03-25 10:42:25] 2026-03-25 14:41:24,384 | INFO     | sum of deviations: 180387194269.04816
[2026-03-25 10:42:25] 2026-03-25 14:41:24,384 | INFO     | mean x: 1774430996.5066445
[2026-03-25 10:42:25] 2026-03-25 14:41:24,384 | INFO     | mean y: 2552375.6129568107
[2026-03-25 10:42:25] 2026-03-25 14:41:24,384 | INFO     | intersect: -4728945205.025397
[2026-03-25 10:42:25] 2026-03-25 14:41:24,384 | INFO     | chi2: 1.61669290486412
[2026-03-25 10:42:25] 2026-03-25 14:41:24,384 | INFO     | current chi2=1.61669290486412 (change=-0.006415703069250144 %)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,384 | INFO     | right removable region: 601
[2026-03-25 10:42:25] 2026-03-25 14:41:24,385 | INFO     | sum of square deviations: 67649747650.47353
[2026-03-25 10:42:25] 2026-03-25 14:41:24,433 | INFO     | sum of deviations: 76177294946.16606
[2026-03-25 10:42:25] 2026-03-25 14:41:24,434 | INFO     | mean x: 1774431301.5066445
[2026-03-25 10:42:25] 2026-03-25 14:41:24,434 | INFO     | mean y: 2562193.4584717606
[2026-03-25 10:42:25] 2026-03-25 14:41:24,434 | INFO     | intersect: -1995543953.4405818
[2026-03-25 10:42:25] 2026-03-25 14:41:24,434 | INFO     | chi2: 0.030438242388376134
[2026-03-25 10:42:25] 2026-03-25 14:41:24,434 | INFO     | current chi2=0.030438242388376134 (change=98.11713188546555 %)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,435 | INFO     | sum of square deviations: 65978077877.9733
[2026-03-25 10:42:25] 2026-03-25 14:41:24,490 | INFO     | sum of deviations: 62796683025.02172
[2026-03-25 10:42:25] 2026-03-25 14:41:24,490 | INFO     | mean x: 1774431454.0067003
[2026-03-25 10:42:25] 2026-03-25 14:41:24,490 | INFO     | mean y: 2563410.244556114
[2026-03-25 10:42:25] 2026-03-25 14:41:24,491 | INFO     | intersect: -1686306789.5356562
[2026-03-25 10:42:25] 2026-03-25 14:41:24,491 | INFO     | chi2: 0.004869402401374688
[2026-03-25 10:42:25] 2026-03-25 14:41:24,491 | INFO     | current chi2=0.004869402401374688 (change=84.00235355496665 %)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,491 | INFO     | sum of square deviations: 64334176067.97301
[2026-03-25 10:42:25] 2026-03-25 14:41:24,509 | INFO     | sum of deviations: 57609592094.64869
[2026-03-25 10:42:25] 2026-03-25 14:41:24,509 | INFO     | mean x: 1774431606.5067568
[2026-03-25 10:42:25] 2026-03-25 14:41:24,509 | INFO     | mean y: 2563891.3378378376
[2026-03-25 10:42:25] 2026-03-25 14:41:24,509 | INFO     | intersect: -1586393756.03609
[2026-03-25 10:42:25] 2026-03-25 14:41:24,509 | INFO     | chi2: 0.00360069822085636
[2026-03-25 10:42:25] 2026-03-25 14:41:24,509 | INFO     | current chi2=0.00360069822085636 (change=26.054617711614025 %)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,510 | INFO     | sum of square deviations: 62717809657.97277
[2026-03-25 10:42:25] 2026-03-25 14:41:24,552 | INFO     | sum of deviations: 54040018673.47702
[2026-03-25 10:42:25] 2026-03-25 14:41:24,553 | INFO     | mean x: 1774431759.0068142
[2026-03-25 10:42:25] 2026-03-25 14:41:24,553 | INFO     | mean y: 2564227.880749574
[2026-03-25 10:42:25] 2026-03-25 14:41:24,553 | INFO     | intersect: -1526352772.162303
[2026-03-25 10:42:25] 2026-03-25 14:41:24,553 | INFO     | chi2: 0.0031282912729383937
[2026-03-25 10:42:25] 2026-03-25 14:41:24,553 | INFO     | current chi2=0.0031282912729383937 (change=13.119870617916234 %)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,553 | INFO     | left removable region: 40
[2026-03-25 10:42:25] 2026-03-25 14:41:24,553 | INFO     | sum of square deviations: 54747615292.9839
[2026-03-25 10:42:25] 2026-03-25 14:41:24,558 | INFO     | sum of deviations: 47126542803.48663
[2026-03-25 10:42:25] 2026-03-25 14:41:24,558 | INFO     | mean x: 1774432186.0053475
[2026-03-25 10:42:25] 2026-03-25 14:41:24,558 | INFO     | mean y: 2564529.1711229947
[2026-03-25 10:42:25] 2026-03-25 14:41:24,558 | INFO     | intersect: -1524860070.3873153
[2026-03-25 10:42:25] 2026-03-25 14:41:24,558 | INFO     | chi2: 0.0028395640120954238
[2026-03-25 10:42:25] 2026-03-25 14:41:24,558 | INFO     | current memory leak: 0.86 B/s (using 561 data points, chi2=0.00)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | could have reported an average CPU frequency of 3799 MHz (24 samples)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | ..............................
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | . Timing measurements:
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | . get job = 0 s
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | . initial setup = 3 s
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | . payload setup = 38 s
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | . stage-in = 0 s
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | . payload execution = 37037 s
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | . stage-out = 3 s
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | . log creation = 0 s
[2026-03-25 10:42:25] 2026-03-25 14:41:24,559 | INFO     | ..............................
[2026-03-25 10:42:25] 2026-03-25 14:41:24,643 | INFO     | 
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | job summary report
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | --------------------------------------------------
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | PanDA job id: 7056930895
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | task id: 49177958
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | errors: (none)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | pilot state: finished 
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | transexitcode: 0
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | exeerrorcode: 0
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | exeerrordiag: 
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | exitcode: 0
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | exitmsg: OK
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | cpuconsumptiontime: 62247 s
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | nevents: 400
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | neventsw: 0
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | pid: 3734887
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | pgrp: 3734887
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | corecount: 9
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | event service: False
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | sizes: {0: 2280302, 11: 2280302, 37079: 2320637, 37080: 2320636, 37084: 2329690, 37085: 2329746, 37086: 2330068}
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | --------------------------------------------------
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | 
[2026-03-25 10:42:25] 2026-03-25 14:41:24,644 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-25 10:42:25] 2026-03-25 14:41:24,702 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 10:42:25] 2026-03-25 14:41:24,703 | INFO     | job 7056930895 has completed (purged errors)
[2026-03-25 10:42:25] 2026-03-25 14:41:24,704 | INFO     | overall cleanup function is called
[2026-03-25 10:42:25] 2026-03-25 14:41:25,119 | INFO     | number of running child processes to parent process 3734887: 1
[2026-03-25 10:42:25] 2026-03-25 14:41:25,120 | INFO     | maximum number of monitored processes: 6
[2026-03-25 10:42:25] 2026-03-25 14:41:25,120 | INFO     | aborting job monitoring since job object (job id=7056930895) has expired
[2026-03-25 10:42:25] 2026-03-25 14:41:25,131 | INFO     | PID=3685402 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-25 10:42:25] 2026-03-25 14:41:25,131 | INFO     | .. there are 80 such processes running
[2026-03-25 10:42:25] 2026-03-25 14:41:25,712 | INFO     | --- collectZombieJob: --- 10, [3734887]
[2026-03-25 10:42:25] 2026-03-25 14:41:25,712 | INFO     | zombie collector waiting for pid 3734887
[2026-03-25 10:42:25] 2026-03-25 14:41:25,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 10:42:25] 2026-03-25 14:41:25,712 | INFO     | collected zombie processes
[2026-03-25 10:42:25] 2026-03-25 14:41:25,712 | INFO     | will attempt to kill all subprocesses of pid=3734887
[2026-03-25 10:42:25] 2026-03-25 14:41:26,938 | INFO     | process IDs to be killed: [3734887] (in reverse order)
[2026-03-25 10:42:25] 2026-03-25 14:41:27,511 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 10:42:25] 2026-03-25 14:41:27,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 10:42:25] 2026-03-25 14:41:27,620 | INFO     | did not find any defunct processes belonging to 3734887
[2026-03-25 10:42:25] 2026-03-25 14:41:27,666 | INFO     | did not find any defunct processes belonging to 3734887
[2026-03-25 10:42:25] 2026-03-25 14:41:27,666 | INFO     | ready for new job
[2026-03-25 10:42:25] 2026-03-25 14:41:27,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 10:42:25] 2026-03-25 14:41:27,668 | INFO     | **************************************
[2026-03-25 10:42:25] 2026-03-25 14:41:27,668 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 10:42:25] 2026-03-25 14:41:27,668 | INFO     | **************************************
[2026-03-25 10:42:25] 2026-03-25 14:41:27,668 | INFO     | 
[2026-03-25 10:42:25] 2026-03-25 14:41:27,673 | INFO     | architecture information:
[2026-03-25 10:42:25] 2026-03-25 14:41:27,673 | INFO     | executing command: cat /etc/os-release
[2026-03-25 10:42:25] 2026-03-25 14:41:27,712 | INFO     | cat /etc/os-release:
[2026-03-25 10:42:25] NAME="CentOS Linux"
[2026-03-25 10:42:25] VERSION="7 (Core)"
[2026-03-25 10:42:25] ID="centos"
[2026-03-25 10:42:25] ID_LIKE="rhel fedora"
[2026-03-25 10:42:25] VERSION_ID="7"
[2026-03-25 10:42:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 10:42:25] ANSI_COLOR="0;31"
[2026-03-25 10:42:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 10:42:25] HOME_URL="https://www.centos.org/"
[2026-03-25 10:42:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 10:42:25] 
[2026-03-25 10:42:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 10:42:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 10:42:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 10:42:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 10:42:25] 
[2026-03-25 10:42:25] 2026-03-25 14:41:27,712 | INFO     | **************************************
[2026-03-25 10:42:25] 2026-03-25 14:41:28,216 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-25 10:42:25] 2026-03-25 14:41:28,316 | INFO     | sufficient remaining disk space (92128935936 B)
[2026-03-25 10:42:25] 2026-03-25 14:41:28,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 10:42:25] 2026-03-25 14:41:28,316 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 10:42:25] 2026-03-25 14:41:28,316 | INFO     | update_server=False
[2026-03-25 10:42:25] 2026-03-25 14:41:28,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 10:42:25] 2026-03-25 14:41:28,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 10:42:25] 2026-03-25 14:41:28,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 10:42:25] 2026-03-25 14:41:28,645 | INFO     | aborting loop
[2026-03-25 10:42:25] 2026-03-25 14:41:28,654 | INFO     | all payload control threads have been joined
[2026-03-25 10:42:25] 2026-03-25 14:41:28,807 | INFO     | all data control threads have been joined
[2026-03-25 10:42:25] 2026-03-25 14:41:29,323 | INFO     | [job] retrieve thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:29,387 | INFO     | [job] validate thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:29,649 | INFO     | all job control threads have been joined
[2026-03-25 10:42:25] 2026-03-25 14:41:29,651 | INFO     | [job] job monitor thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:29,660 | INFO     | [payload] control thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:29,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 10:42:25] 2026-03-25 14:41:29,815 | INFO     | [data] control thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:29,883 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:29,964 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:29,977 | INFO     | [data] copytool_in thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:30,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 10:42:25] 2026-03-25 14:41:30,304 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:30,342 | INFO     | [data] copytool_out thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:30,365 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:30,655 | INFO     | [job] control thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:30,686 | INFO     | [job] queue monitor thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:30,859 | INFO     | [payload] validate_post thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:30,859 | INFO     | [payload] failed_post thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:34,054 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 10:42:25] 2026-03-25 14:41:59,882 | INFO     | PID=3685402 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 10:42:25] 2026-03-25 14:41:59,882 | INFO     | .. there are 80 such processes running
[2026-03-25 10:42:25] 2026-03-25 14:41:59,883 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 10:42:25] 2026-03-25 14:41:59,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 10:42:25] 2026-03-25 14:41:59,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 10:42:25] 2026-03-25 14:42:18,302 | INFO     | [monitor] cgroup control has ended
[2026-03-25 10:42:25] 2026-03-25 14:42:18,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723464705856)>', '<ExcThread(monitor, started 139722970085120)>']
[2026-03-25 10:42:25] 2026-03-25 14:42:19,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 10:42:25] 2026-03-25 14:42:19,017 | INFO     | [monitor] control thread has ended
[2026-03-25 10:42:25] 2026-03-25 14:42:23,916 | INFO     | all workflow threads have been joined
[2026-03-25 10:42:25] 2026-03-25 14:42:23,916 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 10:42:25] 2026-03-25 14:42:23,916 | INFO     | traces error code: 0
[2026-03-25 10:42:25] 2026-03-25 14:42:23,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 10:42:25] 2026-03-25 14:42:24,179 [wrapper] ==== pilot stdout END ====
[2026-03-25 10:42:25] 2026-03-25 14:42:24,202 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 10:42:25] 2026-03-25 14:42:24,211 [wrapper] pilotpid: 3685402
[2026-03-25 10:42:25] 2026-03-25 14:42:24,223 [wrapper] Pilot exit status: 0
[2026-03-25 10:42:25] 2026-03-25 14:42:24,299 [wrapper] pandaids: 7056930895 7056930895
[2026-03-25 10:42:25] 2026-03-25 14:42:24,863 [wrapper] cleanup supervisor_pilot 2510934 3685403
[2026-03-25 10:42:25] 2026-03-25 14:42:24,894 [wrapper] Test setup, not cleaning
[2026-03-25 10:42:25] 2026-03-25 14:42:24,971 [wrapper] apfmon messages muted
[2026-03-25 10:42:25] 2026-03-25 14:42:24,995 [wrapper] ==== wrapper stdout END ====
[2026-03-25 10:42:25] 2026-03-25 14:42:25,015 [wrapper] ==== wrapper stderr END ====
[2026-03-25 10:42:25]  *** Error codes and diagnostics ***
[2026-03-25 10:42:25]     "exeErrorCode": 0,
[2026-03-25 10:42:25]     "exeErrorDiag": "",
[2026-03-25 10:42:25]     "pilotErrorCode": 0,
[2026-03-25 10:42:25]     "pilotErrorDiag": "",
[2026-03-25 10:42:25]  *** Listing of results directory ***
[2026-03-25 10:42:25] total 709460
[2026-03-25 10:42:25] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 09:19 pilot3.tar.gz
[2026-03-25 10:42:25] -rwx------. 1 boincer umatlas     36322 Mar 16 09:34 runpilot2-wrapper.sh
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas       100 Mar 24 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 10:42:25] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 24 18:35 run_atlas
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas       105 Mar 24 18:35 job.xml
[2026-03-25 10:42:25] -rw-r--r--. 3 boincer umatlas 240253083 Mar 24 18:35 EVNT.49127744._000002.pool.root.1
[2026-03-25 10:42:25] -rw-r--r--. 3 boincer umatlas 240253083 Mar 24 18:35 ATLAS.root_0
[2026-03-25 10:42:25] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 18:35 start_atlas.sh
[2026-03-25 10:42:25] drwxrwx--x. 2 boincer umatlas      4096 Mar 24 18:35 shared
[2026-03-25 10:42:25] -rw-r--r--. 2 boincer umatlas    596138 Mar 24 18:35 input.tar.gz
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas         0 Mar 24 18:35 boinc_lockfile
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas      2615 Mar 25 00:22 pandaJob.out
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas        57 Mar 25 00:22 setup.sh.local
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas      5111 Mar 25 00:23 queuedata.json
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas   1010836 Mar 25 00:23 agis_schedconf.cvmfs.json
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas       427 Mar 25 00:23 workernode_map.json
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas      7172 Mar 25 10:36 init_data.xml
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas 232622512 Mar 25 10:40 HITS.49177958._000050.pool.root.1
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas       531 Mar 25 10:41 boinc_task_state.xml
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas      1049 Mar 25 10:41 memory_monitor_summary.json
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas   1511579 Mar 25 10:41 agis_ddmendpoints.agis.ALL.json
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas    726854 Mar 25 10:41 log.49177958._000050.job.log.tgz.1
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas      6344 Mar 25 10:41 heartbeat.json
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas        96 Mar 25 10:41 pilot_heartbeat.json
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas      4820 Mar 25 10:42 pilotlog.txt
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas      8192 Mar 25 10:42 boinc_mmap_file
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas        29 Mar 25 10:42 wrapper_checkpoint.txt
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas   3973426 Mar 25 10:42 log.49177958._000050.job.log.1
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas       357 Mar 25 10:42 output.list
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas       620 Mar 25 10:42 runtime_log
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas   4720640 Mar 25 10:42 result.tar.gz
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas       786 Mar 25 10:42 Xj5NDm0GNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1BuLDmEmJ2Hn.diag
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas      9417 Mar 25 10:42 runtime_log.err
[2026-03-25 10:42:25] -rw-r--r--. 1 boincer umatlas     23480 Mar 25 10:42 stderr.txt
[2026-03-25 10:42:25] HITS file was successfully produced:
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas 232622512 Mar 25 10:40 shared/HITS.pool.root.1
[2026-03-25 10:42:25]  *** Contents of shared directory: ***
[2026-03-25 10:42:25] total 467016
[2026-03-25 10:42:25] -rw-r--r--. 3 boincer umatlas 240253083 Mar 24 18:35 ATLAS.root_0
[2026-03-25 10:42:25] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 18:35 start_atlas.sh
[2026-03-25 10:42:25] -rw-r--r--. 2 boincer umatlas    596138 Mar 24 18:35 input.tar.gz
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas 232622512 Mar 25 10:40 HITS.pool.root.1
[2026-03-25 10:42:25] -rw-------. 1 boincer umatlas   4720640 Mar 25 10:42 result.tar.gz
10:42:26 (3625448): run_atlas exited; CPU time 63842.927110
10:42:26 (3625448): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN