Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:10:09 (780458): wrapper (7.7.26015): starting
18:10:09 (780458): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 18:10:09] Arguments: --nthreads 8
[2026-03-24 18:10:09] Threads: 8
[2026-03-24 18:10:09] Checking for CVMFS
[2026-03-24 18:10:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 18:10:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 18:10:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 18:10:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 18:10:11] 2.13.3.0 11959 200553 716200 157658 2 772 25735830 32935937 28803 16776704 0 801294011 99.558 1044772725 32482 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-24 18:10:11] CVMFS is ok
[2026-03-24 18:10:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 18:10:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 18:10:11] Further information can be found at the LHC@home message board.
[2026-03-24 18:10:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 18:10:11] Checking for apptainer binary...
[2026-03-24 18:10:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 18:10:11] Running /usr/bin/apptainer --version
[2026-03-24 18:10:12] apptainer version 1.4.5-2.el9
[2026-03-24 18:10:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 18:10:12] c6-8-25-4.aglt2.org
[2026-03-24 18:10:12] apptainer works
[2026-03-24 18:10:12] Set ATHENA_PROC_NUMBER=8
[2026-03-24 18:10:12] Set ATHENA_CORE_NUMBER=8
[2026-03-24 18:10:12] Starting ATLAS job with PandaID=7056975006
[2026-03-24 18:10:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:00:06 (780458): BOINC client no longer exists - exiting
21:00:06 (780458): timer handler: client dead, exiting
21:11:00 (1478237): wrapper (7.7.26015): starting
21:11:00 (1478237): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 21:11:00] Arguments: --nthreads 8
[2026-03-24 21:11:00] Threads: 8
[2026-03-24 21:11:00] This job has been restarted, cleaning up previous attempt
[2026-03-24 21:11:00] Checking for CVMFS
[2026-03-24 21:11:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 21:11:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 21:11:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 21:11:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 21:11:01] 2.13.3.0 11959 200734 700596 157664 2 318 26810782 32935936 24356 16776704 0 802003939 99.558 1044820370 32482 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-24 21:11:01] CVMFS is ok
[2026-03-24 21:11:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 21:11:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 21:11:01] Further information can be found at the LHC@home message board.
[2026-03-24 21:11:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 21:11:01] Checking for apptainer binary...
[2026-03-24 21:11:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-24 21:11:01] Running /usr/bin/apptainer --version
[2026-03-24 21:11:01] apptainer version 1.4.5-2.el9
[2026-03-24 21:11:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 21:11:02] c6-8-25-4.aglt2.org
[2026-03-24 21:11:02] apptainer works
[2026-03-24 21:11:02] Set ATHENA_PROC_NUMBER=8
[2026-03-24 21:11:02] Set ATHENA_CORE_NUMBER=8
[2026-03-24 21:11:02] Starting ATLAS job with PandaID=7056975006
[2026-03-24 21:11:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 23:48:57]  *** The last 200 lines of the pilot log: ***
[2026-03-25 23:48:57] 2026-03-26 03:48:14,943 | INFO     | job 7056975006 has finished - writing final server update
[2026-03-25 23:48:57] 2026-03-26 03:48:14,944 | INFO     | total number of processed events: 400 (read)
[2026-03-25 23:48:57] 2026-03-26 03:48:15,042 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7056975006/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 23:48:57] 2026-03-26 03:48:15,042 | INFO     | extracted standard info from prmon json
[2026-03-25 23:48:57] 2026-03-26 03:48:15,043 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 23:48:57] 2026-03-26 03:48:15,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 23:48:57] 2026-03-26 03:48:15,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 23:48:57] 2026-03-26 03:48:15,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 23:48:57] 2026-03-26 03:48:15,324 | INFO     | fitting pss+swap vs Time
[2026-03-25 23:48:57] 2026-03-26 03:48:15,331 | INFO     | sum of square deviations: 1199981357057.2344
[2026-03-25 23:48:57] 2026-03-26 03:48:15,759 | INFO     | sum of deviations: 797781257566.19
[2026-03-25 23:48:57] 2026-03-26 03:48:15,759 | INFO     | mean x: 1774448974.5847135
[2026-03-25 23:48:57] 2026-03-26 03:48:15,759 | INFO     | mean y: 2520116.7579617836
[2026-03-25 23:48:57] 2026-03-26 03:48:15,760 | INFO     | intersect: -1177183322.8878171
[2026-03-25 23:48:57] 2026-03-26 03:48:15,766 | INFO     | chi2: 2.3781893214783745
[2026-03-25 23:48:57] 2026-03-26 03:48:15,875 | INFO     | sum of square deviations: 1188553006599.6973
[2026-03-25 23:48:57] 2026-03-26 03:48:16,111 | INFO     | sum of deviations: 893017154600.7919
[2026-03-25 23:48:57] 2026-03-26 03:48:16,112 | INFO     | mean x: 1774448822.084984
[2026-03-25 23:48:57] 2026-03-26 03:48:16,112 | INFO     | mean y: 2521384.1444089455
[2026-03-25 23:48:57] 2026-03-26 03:48:16,112 | INFO     | intersect: -1330707533.1055176
[2026-03-25 23:48:57] 2026-03-26 03:48:16,114 | INFO     | chi2: 1.6890540796465392
[2026-03-25 23:48:57] 2026-03-26 03:48:16,114 | INFO     | current chi2=1.6890540796465392 (change=28.97730788747475 %)
[2026-03-25 23:48:57] 2026-03-26 03:48:16,116 | INFO     | sum of square deviations: 1177197448204.6616
[2026-03-25 23:48:57] 2026-03-26 03:48:16,351 | INFO     | sum of deviations: 887065307391.355
[2026-03-25 23:48:57] 2026-03-26 03:48:16,351 | INFO     | mean x: 1774448669.5852563
[2026-03-25 23:48:57] 2026-03-26 03:48:16,352 | INFO     | mean y: 2521304.2153846156
[2026-03-25 23:48:57] 2026-03-26 03:48:16,352 | INFO     | intersect: -1334596659.2463994
[2026-03-25 23:48:57] 2026-03-26 03:48:16,377 | INFO     | chi2: 1.6890500998167128
[2026-03-25 23:48:57] 2026-03-26 03:48:16,377 | INFO     | current chi2=1.6890500998167128 (change=0.00023562477213248385 %)
[2026-03-25 23:48:57] 2026-03-26 03:48:16,377 | INFO     | right removable region: 1559
[2026-03-25 23:48:57] 2026-03-26 03:48:16,400 | INFO     | sum of square deviations: 1188552925469.6978
[2026-03-25 23:48:57] 2026-03-26 03:48:16,546 | INFO     | sum of deviations: 511735644681.5518
[2026-03-25 23:48:57] 2026-03-26 03:48:16,546 | INFO     | mean x: 1774449127.084984
[2026-03-25 23:48:57] 2026-03-26 03:48:16,547 | INFO     | mean y: 2523929.657507987
[2026-03-25 23:48:57] 2026-03-26 03:48:16,547 | INFO     | intersect: -761471386.4489281
[2026-03-25 23:48:57] 2026-03-26 03:48:16,549 | INFO     | chi2: 0.8170334975139105
[2026-03-25 23:48:57] 2026-03-26 03:48:16,549 | INFO     | current chi2=0.8170334975139105 (change=65.6447243230404 %)
[2026-03-25 23:48:57] 2026-03-26 03:48:16,551 | INFO     | sum of square deviations: 1177197285944.661
[2026-03-25 23:48:57] 2026-03-26 03:48:16,933 | INFO     | sum of deviations: 424598075790.17126
[2026-03-25 23:48:57] 2026-03-26 03:48:16,933 | INFO     | mean x: 1774449279.5852563
[2026-03-25 23:48:57] 2026-03-26 03:48:16,933 | INFO     | mean y: 2525099.8596153846
[2026-03-25 23:48:57] 2026-03-26 03:48:16,933 | INFO     | intersect: -637493152.5563807
[2026-03-25 23:48:57] 2026-03-26 03:48:16,935 | INFO     | chi2: 0.7222143768004186
[2026-03-25 23:48:57] 2026-03-26 03:48:16,935 | INFO     | current chi2=0.7222143768004186 (change=11.605291704931304 %)
[2026-03-25 23:48:57] 2026-03-26 03:48:16,935 | INFO     | left removable region: 20
[2026-03-25 23:48:57] 2026-03-26 03:48:16,937 | INFO     | sum of square deviations: 1130293608009.8486
[2026-03-25 23:48:57] 2026-03-26 03:48:17,320 | INFO     | sum of deviations: 465965177039.2596
[2026-03-25 23:48:57] 2026-03-26 03:48:17,320 | INFO     | mean x: 1774449249.0851202
[2026-03-25 23:48:57] 2026-03-26 03:48:17,320 | INFO     | mean y: 2526984.7842755034
[2026-03-25 23:48:57] 2026-03-26 03:48:17,320 | INFO     | intersect: -728992288.2946577
[2026-03-25 23:48:57] 2026-03-26 03:48:17,326 | INFO     | chi2: 0.007386688248426554
[2026-03-25 23:48:57] 2026-03-26 03:48:17,327 | INFO     | current memory leak: 0.41 B/s (using 1539 data points, chi2=0.01)
[2026-03-25 23:48:57] 2026-03-26 03:48:17,328 | INFO     | could have reported an average CPU frequency of 2666 MHz (56 samples)
[2026-03-25 23:48:57] 2026-03-26 03:48:17,328 | INFO     | ..............................
[2026-03-25 23:48:57] 2026-03-26 03:48:17,328 | INFO     | . Timing measurements:
[2026-03-25 23:48:57] 2026-03-26 03:48:17,329 | INFO     | . get job = 0 s
[2026-03-25 23:48:57] 2026-03-26 03:48:17,329 | INFO     | . initial setup = 2 s
[2026-03-25 23:48:57] 2026-03-26 03:48:17,344 | INFO     | . payload setup = 19 s
[2026-03-25 23:48:57] 2026-03-26 03:48:17,344 | INFO     | . stage-in = 0 s
[2026-03-25 23:48:57] 2026-03-26 03:48:17,344 | INFO     | . payload execution = 95778 s
[2026-03-25 23:48:57] 2026-03-26 03:48:17,344 | INFO     | . stage-out = 5 s
[2026-03-25 23:48:57] 2026-03-26 03:48:17,344 | INFO     | . log creation = 1 s
[2026-03-25 23:48:57] 2026-03-26 03:48:17,344 | INFO     | ..............................
[2026-03-25 23:48:57] 2026-03-26 03:48:17,824 | INFO     | 
[2026-03-25 23:48:57] 2026-03-26 03:48:17,824 | INFO     | job summary report
[2026-03-25 23:48:57] 2026-03-26 03:48:17,824 | INFO     | --------------------------------------------------
[2026-03-25 23:48:57] 2026-03-26 03:48:17,824 | INFO     | PanDA job id: 7056975006
[2026-03-25 23:48:57] 2026-03-26 03:48:17,824 | INFO     | task id: 49181388
[2026-03-25 23:48:57] 2026-03-26 03:48:17,824 | INFO     | errors: (none)
[2026-03-25 23:48:57] 2026-03-26 03:48:17,824 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 23:48:57] 2026-03-26 03:48:17,824 | INFO     | pilot state: finished 
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | transexitcode: 0
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | exeerrorcode: 0
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | exeerrordiag: 
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | exitcode: 0
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | exitmsg: OK
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | cpuconsumptiontime: 109837 s
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | nevents: 400
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | neventsw: 0
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | pid: 1514134
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | pgrp: 1514134
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | corecount: 8
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | event service: False
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | sizes: {0: 2279808, 1: 2280325, 2: 2280325, 95800: 2347176, 95801: 2347175, 95807: 2356229, 95808: 2356413, 95811: 2356607}
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | --------------------------------------------------
[2026-03-25 23:48:57] 2026-03-26 03:48:17,825 | INFO     | 
[2026-03-25 23:48:57] 2026-03-26 03:48:17,826 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-25 23:48:57] 2026-03-26 03:48:18,026 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,026 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,026 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,026 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,028 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 23:48:57] 2026-03-26 03:48:18,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,028 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 23:48:57] 2026-03-26 03:48:18,028 | INFO     | job 7056975006 has completed (purged errors)
[2026-03-25 23:48:57] 2026-03-26 03:48:18,028 | INFO     | overall cleanup function is called
[2026-03-25 23:48:57] 2026-03-26 03:48:19,065 | INFO     | --- collectZombieJob: --- 10, [1514134]
[2026-03-25 23:48:57] 2026-03-26 03:48:19,065 | INFO     | zombie collector waiting for pid 1514134
[2026-03-25 23:48:57] 2026-03-26 03:48:19,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 23:48:57] 2026-03-26 03:48:19,065 | INFO     | collected zombie processes
[2026-03-25 23:48:57] 2026-03-26 03:48:19,065 | INFO     | will attempt to kill all subprocesses of pid=1514134
[2026-03-25 23:48:57] 2026-03-26 03:48:19,391 | INFO     | PID=1499060 has CPU usage=18.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-25 23:48:57] 2026-03-26 03:48:19,391 | INFO     | .. there are 40 such processes running
[2026-03-25 23:48:57] 2026-03-26 03:48:22,272 | INFO     | process IDs to be killed: [1514134] (in reverse order)
[2026-03-25 23:48:57] 2026-03-26 03:48:22,533 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 23:48:57] 2026-03-26 03:48:22,533 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 23:48:57] 2026-03-26 03:48:22,592 | INFO     | did not find any defunct processes belonging to 1514134
[2026-03-25 23:48:57] 2026-03-26 03:48:22,627 | INFO     | did not find any defunct processes belonging to 1514134
[2026-03-25 23:48:57] 2026-03-26 03:48:22,628 | INFO     | ready for new job
[2026-03-25 23:48:57] 2026-03-26 03:48:22,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 23:48:57] 2026-03-26 03:48:22,633 | INFO     | **************************************
[2026-03-25 23:48:57] 2026-03-26 03:48:22,634 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 23:48:57] 2026-03-26 03:48:22,634 | INFO     | **************************************
[2026-03-25 23:48:57] 2026-03-26 03:48:22,634 | INFO     | 
[2026-03-25 23:48:57] 2026-03-26 03:48:22,639 | INFO     | architecture information:
[2026-03-25 23:48:57] 2026-03-26 03:48:22,648 | INFO     | executing command: cat /etc/os-release
[2026-03-25 23:48:57] 2026-03-26 03:48:22,752 | INFO     | cat /etc/os-release:
[2026-03-25 23:48:57] NAME="CentOS Linux"
[2026-03-25 23:48:57] VERSION="7 (Core)"
[2026-03-25 23:48:57] ID="centos"
[2026-03-25 23:48:57] ID_LIKE="rhel fedora"
[2026-03-25 23:48:57] VERSION_ID="7"
[2026-03-25 23:48:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 23:48:57] ANSI_COLOR="0;31"
[2026-03-25 23:48:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 23:48:57] HOME_URL="https://www.centos.org/"
[2026-03-25 23:48:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 23:48:57] 
[2026-03-25 23:48:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 23:48:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 23:48:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 23:48:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 23:48:57] 
[2026-03-25 23:48:57] 2026-03-26 03:48:22,752 | INFO     | **************************************
[2026-03-25 23:48:57] 2026-03-26 03:48:23,262 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-25 23:48:57] 2026-03-26 03:48:23,324 | INFO     | sufficient remaining disk space (70068994048 B)
[2026-03-25 23:48:57] 2026-03-26 03:48:23,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 23:48:57] 2026-03-26 03:48:23,325 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 23:48:57] 2026-03-26 03:48:23,325 | INFO     | update_server=False
[2026-03-25 23:48:57] 2026-03-26 03:48:23,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 23:48:57] 2026-03-26 03:48:23,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 23:48:57] 2026-03-26 03:48:23,325 | INFO     | all data control threads have been joined
[2026-03-25 23:48:57] 2026-03-26 03:48:23,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 23:48:57] 2026-03-26 03:48:23,703 | INFO     | aborting loop
[2026-03-25 23:48:57] 2026-03-26 03:48:23,745 | INFO     | all payload control threads have been joined
[2026-03-25 23:48:57] 2026-03-26 03:48:24,331 | INFO     | [job] retrieve thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:24,331 | INFO     | [job] queue monitor thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:24,332 | INFO     | [data] control thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:24,384 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:24,710 | INFO     | [job] job monitor thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:24,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 23:48:57] 2026-03-26 03:48:24,753 | INFO     | [payload] control thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:24,849 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:24,883 | INFO     | all job control threads have been joined
[2026-03-25 23:48:57] 2026-03-26 03:48:25,023 | INFO     | [payload] failed_post thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:25,625 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:25,639 | INFO     | [payload] validate_post thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:25,711 | INFO     | [data] copytool_in thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:25,711 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:25,718 | INFO     | [job] validate thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:25,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 23:48:57] 2026-03-26 03:48:25,889 | INFO     | [job] control thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:26,717 | INFO     | [data] copytool_out thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:29,729 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 23:48:57] 2026-03-26 03:48:34,795 | INFO     | [monitor] cgroup control has ended
[2026-03-25 23:48:57] 2026-03-26 03:48:36,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139982286493504)>', '<ExcThread(monitor, started 139981439891200)>']
[2026-03-25 23:48:57] 2026-03-26 03:48:41,645 | INFO     | all workflow threads have been joined
[2026-03-25 23:48:57] 2026-03-26 03:48:41,645 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 23:48:57] 2026-03-26 03:48:41,645 | INFO     | traces error code: 0
[2026-03-25 23:48:57] 2026-03-26 03:48:41,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 23:48:57] 2026-03-26 03:48:55,507 | INFO     | PID=1499060 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-25 23:48:57] 2026-03-26 03:48:55,507 | INFO     | .. there are 40 such processes running
[2026-03-25 23:48:57] 2026-03-26 03:48:55,507 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 23:48:57] 2026-03-26 03:48:55,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 23:48:57] 2026-03-26 03:48:55,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 23:48:57] 2026-03-26 03:48:55,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 23:48:57] 2026-03-26 03:48:55,507 | INFO     | [monitor] control thread has ended
[2026-03-25 23:48:57] 2026-03-26 03:48:55,968 [wrapper] ==== pilot stdout END ====
[2026-03-25 23:48:57] 2026-03-26 03:48:55,992 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 23:48:57] 2026-03-26 03:48:56,013 [wrapper] pilotpid: 1499060
[2026-03-25 23:48:57] 2026-03-26 03:48:56,032 [wrapper] Pilot exit status: 0
[2026-03-25 23:48:57] 2026-03-26 03:48:56,274 [wrapper] pandaids: 7056975006 7056975006
[2026-03-25 23:48:57] 2026-03-26 03:48:56,711 [wrapper] cleanup supervisor_pilot 2980212 1499061
[2026-03-25 23:48:57] 2026-03-26 03:48:56,727 [wrapper] Test setup, not cleaning
[2026-03-25 23:48:57] 2026-03-26 03:48:56,760 [wrapper] apfmon messages muted
[2026-03-25 23:48:57] 2026-03-26 03:48:56,789 [wrapper] ==== wrapper stdout END ====
[2026-03-25 23:48:57] 2026-03-26 03:48:56,813 [wrapper] ==== wrapper stderr END ====
[2026-03-25 23:48:57]  *** Error codes and diagnostics ***
[2026-03-25 23:48:57]     "exeErrorCode": 0,
[2026-03-25 23:48:57]     "exeErrorDiag": "",
[2026-03-25 23:48:57]     "pilotErrorCode": 0,
[2026-03-25 23:48:57]     "pilotErrorDiag": "",
[2026-03-25 23:48:57]  *** Listing of results directory ***
[2026-03-25 23:48:57] total 735424
[2026-03-25 23:48:57] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 12:03 pilot3.tar.gz
[2026-03-25 23:48:57] -rwx------. 1 boincer umatlas     36322 Mar 16 12:41 runpilot2-wrapper.sh
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 12:43 queuedata.json
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas       100 Mar 24 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 23:48:57] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 24 18:10 run_atlas
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas       105 Mar 24 18:10 job.xml
[2026-03-25 23:48:57] -rw-r--r--. 3 boincer umatlas 240027712 Mar 24 18:10 EVNT.49134998._000004.pool.root.1
[2026-03-25 23:48:57] -rw-r--r--. 3 boincer umatlas 240027712 Mar 24 18:10 ATLAS.root_0
[2026-03-25 23:48:57] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 18:10 start_atlas.sh
[2026-03-25 23:48:57] drwxrwx--x. 2 boincer umatlas      4096 Mar 24 18:10 shared
[2026-03-25 23:48:57] -rw-r--r--. 2 boincer umatlas    597542 Mar 24 18:10 input.tar.gz
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas         0 Mar 24 18:10 boinc_lockfile
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas      2610 Mar 24 21:11 pandaJob.out
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas        57 Mar 24 21:11 setup.sh.local
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas   1010852 Mar 24 21:11 agis_schedconf.cvmfs.json
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas       437 Mar 24 21:11 workernode_map.json
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas 245433952 Mar 25 23:46 HITS.49181388._000079.pool.root.1
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas       532 Mar 25 23:46 boinc_task_state.xml
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas      6877 Mar 25 23:46 init_data.xml
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas        96 Mar 25 23:48 pilot_heartbeat.json
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas      1047 Mar 25 23:48 memory_monitor_summary.json
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas   1511579 Mar 25 23:48 agis_ddmendpoints.agis.ALL.json
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas   1359525 Mar 25 23:48 log.49181388._000079.job.log.tgz.1
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas      6397 Mar 25 23:48 heartbeat.json
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas      8192 Mar 25 23:48 boinc_mmap_file
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas        29 Mar 25 23:48 wrapper_checkpoint.txt
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas       823 Mar 25 23:48 pilotlog.txt
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas  10460290 Mar 25 23:48 log.49181388._000079.job.log.1
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas       357 Mar 25 23:48 output.list
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas       620 Mar 25 23:48 runtime_log
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas  11837440 Mar 25 23:48 result.tar.gz
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas      9432 Mar 25 23:48 runtime_log.err
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas       785 Mar 25 23:48 k0hMDmZBQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQNvLDmqS8jXn.diag
[2026-03-25 23:48:57] -rw-r--r--. 1 boincer umatlas     23547 Mar 25 23:48 stderr.txt
[2026-03-25 23:48:57] HITS file was successfully produced:
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas 245433952 Mar 25 23:46 shared/HITS.pool.root.1
[2026-03-25 23:48:57]  *** Contents of shared directory: ***
[2026-03-25 23:48:57] total 486256
[2026-03-25 23:48:57] -rw-r--r--. 3 boincer umatlas 240027712 Mar 24 18:10 ATLAS.root_0
[2026-03-25 23:48:57] -rw-r--r--. 2 boincer umatlas     15845 Mar 24 18:10 start_atlas.sh
[2026-03-25 23:48:57] -rw-r--r--. 2 boincer umatlas    597542 Mar 24 18:10 input.tar.gz
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas 245433952 Mar 25 23:46 HITS.pool.root.1
[2026-03-25 23:48:57] -rw-------. 1 boincer umatlas  11837440 Mar 25 23:48 result.tar.gz
23:48:59 (1478237): run_atlas exited; CPU time 115289.134004
23:48:59 (1478237): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN