Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:19:02 (30648): wrapper (7.7.26015): starting
00:19:02 (30648): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 00:19:02] Arguments: --nthreads 8
[2026-03-25 00:19:02] Threads: 8
[2026-03-25 00:19:02] Checking for CVMFS
[2026-03-25 00:19:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 00:19:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 00:19:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 00:19:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 00:19:03] 2.11.0.0 3896 236133 78456 157663 3 1 3571796 4096000 0 130560 2 16567088 99.603 13689330 395 http://cernvmfs.gridpp.rl.ac.uk/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 00:19:03] CVMFS is ok
[2026-03-25 00:19:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 00:19:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 00:19:03] Further information can be found at the LHC@home message board.
[2026-03-25 00:19:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 00:19:03] Checking for apptainer binary...
[2026-03-25 00:19:03] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 00:19:03] apptainer is not installed, using version from CVMFS
[2026-03-25 00:19:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 00:19:03] WARNING: Environment variable TMPDIR already has value [/tmp/job_11389203/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node396
[2026-03-25 00:19:03] apptainer works
[2026-03-25 00:19:03] Set ATHENA_PROC_NUMBER=8
[2026-03-25 00:19:03] Set ATHENA_CORE_NUMBER=8
[2026-03-25 00:19:03] Starting ATLAS job with PandaID=7056957536
[2026-03-25 00:19:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11389203/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 02:04:32]  *** The last 200 lines of the pilot log: ***
[2026-03-25 02:04:32] 2026-03-25 01:03:39,647 | INFO     | total number of processed events: 400 (read)
[2026-03-25 02:04:32] 2026-03-25 01:03:39,665 | INFO     | using path: /tmp/job_11389203/atlas/pilot/slots/0/PanDA_Pilot-7056957536/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 02:04:32] 2026-03-25 01:03:39,665 | INFO     | extracted standard info from prmon json
[2026-03-25 02:04:32] 2026-03-25 01:03:39,665 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 02:04:32] 2026-03-25 01:03:39,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 02:04:32] 2026-03-25 01:03:39,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 02:04:32] 2026-03-25 01:03:39,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 02:04:32] 2026-03-25 01:03:39,666 | INFO     | fitting pss+swap vs Time
[2026-03-25 02:04:32] 2026-03-25 01:03:39,666 | INFO     | sum of square deviations: 338804492.0
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | sum of deviations: -9726769030.000004
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | mean x: 1774397485.0
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | mean y: 2582243.0970873786
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | intersect: 50943921308.955444
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | chi2: 1.8343953543056535
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | sum of square deviations: 291817564.5
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | sum of deviations: -2322209488.0000024
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | mean x: 1774397332.5
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | mean y: 2605459.5714285714
[2026-03-25 02:04:32] 2026-03-25 01:03:39,667 | INFO     | intersect: 14122805277.130371
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | chi2: 1.157564029950376
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | current chi2=1.157564029950376 (change=36.896698564278054 %)
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | sum of square deviations: 249388862.0
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | sum of deviations: -1390456325.9999983
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | mean x: 1774397180.0
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | mean y: 2608811.494623656
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | intersect: 9895680073.705032
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | chi2: 1.159714263912387
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | current chi2=1.159714263912387 (change=-0.1857550775919628 %)
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | right removable region: 92
[2026-03-25 02:04:32] 2026-03-25 01:03:39,668 | INFO     | sum of square deviations: 291817564.5
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | sum of deviations: -19883398258.5
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | mean x: 1774397637.5
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | mean y: 2614145.336734694
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | intersect: 120903681069.81932
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | chi2: 0.7402722991749678
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | current chi2=0.7402722991749678 (change=59.64488803150222 %)
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | sum of square deviations: 249388862.0
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | sum of deviations: -18705485666.0
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | mean x: 1774397790.0
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | mean y: 2609878.8924731184
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | intersect: 133091843136.73972
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | chi2: 0.7360049895594498
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | current chi2=0.7360049895594498 (change=0.57645134368447 %)
[2026-03-25 02:04:32] 2026-03-25 01:03:39,669 | INFO     | left removable region: 20
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | sum of square deviations: 115715658.0
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | sum of deviations: -7895178699.000001
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | mean x: 1774397759.5
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | mean y: 2631973.027777778
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | intersect: 121068247780.68042
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | chi2: 0.023148571546513168
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | current memory leak: -68.23 B/s (using 72 data points, chi2=0.02)
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | could have reported an average CPU frequency of 2614 MHz (7 samples)
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | ..............................
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | . Timing measurements:
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | . get job = 0 s
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | . initial setup = 2 s
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | . payload setup = 3 s
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | . stage-in = 0 s
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | . payload execution = 6239 s
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | . stage-out = 0 s
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | . log creation = 0 s
[2026-03-25 02:04:32] 2026-03-25 01:03:39,670 | INFO     | ..............................
[2026-03-25 02:04:32] 2026-03-25 01:03:40,145 | INFO     | 
[2026-03-25 02:04:32] 2026-03-25 01:03:40,145 | INFO     | job summary report
[2026-03-25 02:04:32] 2026-03-25 01:03:40,145 | INFO     | --------------------------------------------------
[2026-03-25 02:04:32] 2026-03-25 01:03:40,145 | INFO     | PanDA job id: 7056957536
[2026-03-25 02:04:32] 2026-03-25 01:03:40,145 | INFO     | task id: 49179657
[2026-03-25 02:04:32] 2026-03-25 01:03:40,145 | INFO     | errors: (none)
[2026-03-25 02:04:32] 2026-03-25 01:03:40,145 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 02:04:32] 2026-03-25 01:03:40,145 | INFO     | pilot state: finished 
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | transexitcode: 0
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | exeerrorcode: 0
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | exeerrordiag: 
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | exitcode: 0
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | exitmsg: OK
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | cpuconsumptiontime: 46371 s
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | nevents: 400
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | neventsw: 0
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | pid: 7053
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | pgrp: 7053
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | corecount: 8
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | event service: False
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | sizes: {0: 2279860, 1: 2280488, 11: 2280488, 6247: 2307644, 6249: 2316672, 6251: 2316728, 6252: 2317050}
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | --------------------------------------------------
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | 
[2026-03-25 02:04:32] 2026-03-25 01:03:40,146 | INFO     | executing command: ls -lF /tmp/job_11389203/atlas/pilot/slots/0
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,156 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 02:04:32] 2026-03-25 01:03:40,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,157 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 02:04:32] 2026-03-25 01:03:40,157 | INFO     | job 7056957536 has completed (purged errors)
[2026-03-25 02:04:32] 2026-03-25 01:03:40,157 | INFO     | overall cleanup function is called
[2026-03-25 02:04:32] 2026-03-25 01:03:41,163 | INFO     | --- collectZombieJob: --- 10, [7053]
[2026-03-25 02:04:32] 2026-03-25 01:03:41,163 | INFO     | zombie collector waiting for pid 7053
[2026-03-25 02:04:32] 2026-03-25 01:03:41,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 02:04:32] 2026-03-25 01:03:41,163 | INFO     | collected zombie processes
[2026-03-25 02:04:32] 2026-03-25 01:03:41,163 | INFO     | will attempt to kill all subprocesses of pid=7053
[2026-03-25 02:04:32] 2026-03-25 01:03:41,260 | INFO     | process IDs to be killed: [7053] (in reverse order)
[2026-03-25 02:04:32] 2026-03-25 01:03:41,294 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 02:04:32] 2026-03-25 01:03:41,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 02:04:32] 2026-03-25 01:03:41,298 | INFO     | did not find any defunct processes belonging to 7053
[2026-03-25 02:04:32] 2026-03-25 01:03:41,301 | INFO     | did not find any defunct processes belonging to 7053
[2026-03-25 02:04:32] 2026-03-25 01:03:41,301 | INFO     | ready for new job
[2026-03-25 02:04:32] 2026-03-25 01:03:41,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 02:04:32] 2026-03-25 01:03:41,301 | INFO     | **************************************
[2026-03-25 02:04:32] 2026-03-25 01:03:41,302 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 02:04:32] 2026-03-25 01:03:41,302 | INFO     | **************************************
[2026-03-25 02:04:32] 2026-03-25 01:03:41,302 | INFO     | 
[2026-03-25 02:04:32] 2026-03-25 01:03:41,316 | INFO     | architecture information:
[2026-03-25 02:04:32] 2026-03-25 01:03:41,316 | INFO     | executing command: cat /etc/os-release
[2026-03-25 02:04:32] 2026-03-25 01:03:41,323 | INFO     | cat /etc/os-release:
[2026-03-25 02:04:32] NAME="CentOS Linux"
[2026-03-25 02:04:32] VERSION="7 (Core)"
[2026-03-25 02:04:32] ID="centos"
[2026-03-25 02:04:32] ID_LIKE="rhel fedora"
[2026-03-25 02:04:32] VERSION_ID="7"
[2026-03-25 02:04:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 02:04:32] ANSI_COLOR="0;31"
[2026-03-25 02:04:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 02:04:32] HOME_URL="https://www.centos.org/"
[2026-03-25 02:04:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 02:04:32] 
[2026-03-25 02:04:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 02:04:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 02:04:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 02:04:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 02:04:32] 
[2026-03-25 02:04:32] 2026-03-25 01:03:41,323 | INFO     | **************************************
[2026-03-25 02:04:32] 2026-03-25 01:03:41,826 | INFO     | executing command: df -mP /tmp/job_11389203/atlas/pilot/slots/0
[2026-03-25 02:04:32] 2026-03-25 01:03:41,832 | INFO     | sufficient remaining disk space (225852784640 B)
[2026-03-25 02:04:32] 2026-03-25 01:03:41,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 02:04:32] 2026-03-25 01:03:41,833 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 02:04:32] 2026-03-25 01:03:41,833 | INFO     | update_server=False
[2026-03-25 02:04:32] 2026-03-25 01:03:41,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 02:04:32] 2026-03-25 01:03:41,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 02:04:32] 2026-03-25 01:03:41,942 | INFO     | all job control threads have been joined
[2026-03-25 02:04:32] 2026-03-25 01:03:42,126 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 02:04:32] 2026-03-25 01:03:42,126 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 02:04:32] 2026-03-25 01:03:42,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 02:04:32] 2026-03-25 01:03:42,126 | INFO     | will abort loop
[2026-03-25 02:04:32] 2026-03-25 01:03:42,762 | INFO     | all payload control threads have been joined
[2026-03-25 02:04:32] 2026-03-25 01:03:42,781 | INFO     | all data control threads have been joined
[2026-03-25 02:04:32] 2026-03-25 01:03:42,838 | INFO     | [job] retrieve thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:42,864 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:42,944 | INFO     | [job] control thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:42,982 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:42,992 | INFO     | [data] copytool_in thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,026 | INFO     | [payload] failed_post thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,059 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,131 | INFO     | [job] job monitor thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,494 | INFO     | [payload] validate_post thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,767 | INFO     | [payload] control thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,786 | INFO     | [data] control thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,789 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,795 | INFO     | [job] validate thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,878 | INFO     | [data] copytool_out thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:43,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 02:04:32] 2026-03-25 01:03:44,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 02:04:32] 2026-03-25 01:03:45,733 | INFO     | [job] queue monitor thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:03:47,906 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 02:04:32] 2026-03-25 01:04:12,618 | INFO     | PID=2282 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-25 02:04:32] 2026-03-25 01:04:12,618 | INFO     | .. there are 2 such processes running
[2026-03-25 02:04:32] 2026-03-25 01:04:12,618 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 02:04:32] 2026-03-25 01:04:12,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 02:04:32] 2026-03-25 01:04:12,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 02:04:32] 2026-03-25 01:04:15,344 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-25 02:04:32] 2026-03-25 01:04:26,533 | INFO     | [monitor] cgroup control has ended
[2026-03-25 02:04:32] 2026-03-25 01:04:26,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-25 02:04:32] 2026-03-25 01:04:27,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 02:04:32] 2026-03-25 01:04:27,692 | INFO     | [monitor] control thread has ended
[2026-03-25 02:04:32] 2026-03-25 01:04:31,971 | INFO     | all workflow threads have been joined
[2026-03-25 02:04:32] 2026-03-25 01:04:31,971 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 02:04:32] 2026-03-25 01:04:31,971 | INFO     | traces error code: 0
[2026-03-25 02:04:32] 2026-03-25 01:04:31,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 02:04:32] 2026-03-25 01:04:32,025 [wrapper] ==== pilot stdout END ====
[2026-03-25 02:04:32] 2026-03-25 01:04:32,026 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 02:04:32] 2026-03-25 01:04:32,027 [wrapper] pilotpid: 2282
[2026-03-25 02:04:32] 2026-03-25 01:04:32,028 [wrapper] Pilot exit status: 0
[2026-03-25 02:04:32] 2026-03-25 01:04:32,032 [wrapper] pandaids: 7056957536
[2026-03-25 02:04:32] 2026-03-25 01:04:32,053 [wrapper] cleanup supervisor_pilot 31746 2283
[2026-03-25 02:04:32] 2026-03-25 01:04:32,054 [wrapper] Test setup, not cleaning
[2026-03-25 02:04:32] 2026-03-25 01:04:32,055 [wrapper] apfmon messages muted
[2026-03-25 02:04:32] 2026-03-25 01:04:32,056 [wrapper] ==== wrapper stdout END ====
[2026-03-25 02:04:32] 2026-03-25 01:04:32,056 [wrapper] ==== wrapper stderr END ====
[2026-03-25 02:04:32]  *** Error codes and diagnostics ***
[2026-03-25 02:04:32]     "exeErrorCode": 0,
[2026-03-25 02:04:32]     "exeErrorDiag": "",
[2026-03-25 02:04:32]     "pilotErrorCode": 0,
[2026-03-25 02:04:32]     "pilotErrorDiag": "",
[2026-03-25 02:04:32]  *** Listing of results directory ***
[2026-03-25 02:04:32] total 466404
[2026-03-25 02:04:32] -rwx------ 1 mf493845 unix-user     36322 Mar 16 16:26 runpilot2-wrapper.sh
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user      5111 Mar 16 16:28 queuedata.json
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user    585013 Mar 16 16:28 pilot3.tar.gz
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user       100 Mar 24 23:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 02:04:32] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 23:18 run_atlas
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user       105 Mar 24 23:18 job.xml
[2026-03-25 02:04:32] -rw-r--r-- 2 mf493845 unix-user 237544886 Mar 25 00:19 EVNT.49131943._000003.pool.root.1
[2026-03-25 02:04:32] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 00:19 start_atlas.sh
[2026-03-25 02:04:32] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 00:19 shared
[2026-03-25 02:04:32] -rw-r--r-- 2 mf493845 unix-user    597551 Mar 25 00:19 input.tar.gz
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user      6391 Mar 25 00:19 init_data.xml
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user         0 Mar 25 00:19 boinc_setup_complete
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user      8192 Mar 25 00:19 boinc_mmap_file
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user         0 Mar 25 00:19 boinc_lockfile
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user      2641 Mar 25 00:19 pandaJob.out
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user   1010852 Mar 25 00:19 agis_schedconf.cvmfs.json
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user   1511579 Mar 25 00:19 agis_ddmendpoints.agis.ALL.json
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user       416 Mar 25 00:19 workernode_map.json
[2026-03-25 02:04:32] drwx------ 5 mf493845 unix-user       440 Mar 25 00:19 pilot3
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user 233574448 Mar 25 02:03 HITS.49179657._000068.pool.root.1
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user      1024 Mar 25 02:03 memory_monitor_summary.json
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user    354130 Mar 25 02:03 log.49179657._000068.job.log.tgz.1
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user      6314 Mar 25 02:03 heartbeat.json
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user        95 Mar 25 02:04 pilot_heartbeat.json
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user      5016 Mar 25 02:04 pilotlog.txt
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user    925128 Mar 25 02:04 log.49179657._000068.job.log.1
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user       357 Mar 25 02:04 output.list
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user       620 Mar 25 02:04 runtime_log
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user   1300480 Mar 25 02:04 result.tar.gz
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user      9219 Mar 25 02:04 runtime_log.err
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user       645 Mar 25 02:04 41DMDmN1OM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm86xLDmVokoWo.diag
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user     21485 Mar 25 02:04 stderr.txt
[2026-03-25 02:04:32] HITS file was successfully produced:
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user 233574448 Mar 25 02:03 shared/HITS.pool.root.1
[2026-03-25 02:04:32]  *** Contents of shared directory: ***
[2026-03-25 02:04:32] total 461956
[2026-03-25 02:04:32] -rw-r--r-- 2 mf493845 unix-user 237544886 Mar 25 00:19 ATLAS.root_0
[2026-03-25 02:04:32] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 00:19 start_atlas.sh
[2026-03-25 02:04:32] -rw-r--r-- 2 mf493845 unix-user    597551 Mar 25 00:19 input.tar.gz
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user 233574448 Mar 25 02:03 HITS.pool.root.1
[2026-03-25 02:04:32] -rw------- 1 mf493845 unix-user   1300480 Mar 25 02:04 result.tar.gz
02:04:33 (30648): run_atlas exited; CPU time 46452.633224
02:04:33 (30648): called boinc_finish(0)

</stderr_txt>
]]>

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