Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:02:03 (4295): wrapper (7.7.26015): starting
00:02:03 (4295): wrapper: running run_atlas (--nthreads 8)
[2026-03-25 00:02:03] Arguments: --nthreads 8
[2026-03-25 00:02:03] Threads: 8
[2026-03-25 00:02:03] Checking for CVMFS
[2026-03-25 00:02:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 00:02:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 00:02:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 00:02:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 00:02:04] 2.11.0.0 5736 29617 66140 157660 2 188 4072370 4096001 3668 130560 0 2747241 99.478 2414042 270 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-25 00:02:04] CVMFS is ok
[2026-03-25 00:02:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 00:02:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-25 00:02:04] Further information can be found at the LHC@home message board.
[2026-03-25 00:02:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 00:02:04] Checking for apptainer binary...
[2026-03-25 00:02:04] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-25 00:02:04] apptainer is not installed, using version from CVMFS
[2026-03-25 00:02:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 00:02:04] WARNING: Environment variable TMPDIR already has value [/tmp/job_11389010/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node012
[2026-03-25 00:02:04] apptainer works
[2026-03-25 00:02:04] Set ATHENA_PROC_NUMBER=8
[2026-03-25 00:02:04] Set ATHENA_CORE_NUMBER=8
[2026-03-25 00:02:04] Starting ATLAS job with PandaID=7056974183
[2026-03-25 00:02:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11389010/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 02:00:28]  *** The last 200 lines of the pilot log: ***
[2026-03-25 02:00:28] 2026-03-25 00:59:22,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 02:00:28] 2026-03-25 00:59:22,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 02:00:28] 2026-03-25 00:59:22,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 02:00:28] 2026-03-25 00:59:22,365 | INFO     | fitting pss+swap vs Time
[2026-03-25 02:00:28] 2026-03-25 00:59:22,366 | INFO     | sum of square deviations: 471562330.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,366 | INFO     | sum of deviations: 16459597548.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,366 | INFO     | mean x: 1774396825.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,366 | INFO     | mean y: 2511853.356521739
[2026-03-25 02:00:28] 2026-03-25 00:59:22,366 | INFO     | intersect: -61931734739.13313
[2026-03-25 02:00:28] 2026-03-25 00:59:22,366 | INFO     | chi2: 1.0965465245397228
[2026-03-25 02:00:28] 2026-03-25 00:59:22,366 | INFO     | sum of square deviations: 412686807.5
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | sum of deviations: 15630693070.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | mean x: 1774396672.5
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | mean y: 2509705.727272727
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | intersect: -67203539211.34844
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | chi2: 1.097433434534917
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | current chi2=1.097433434534917 (change=-0.08088211264602144 %)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | right removable region: 109
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | sum of square deviations: 412686807.5
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | sum of deviations: 3728593036.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | mean x: 1774396977.5
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | mean y: 2544025.2181818183
[2026-03-25 02:00:28] 2026-03-25 00:59:22,367 | INFO     | intersect: -16028993918.73693
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | chi2: 0.002552657512800577
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | current chi2=0.002552657512800577 (change=99.76720937455235 %)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | sum of square deviations: 358927660.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | sum of deviations: 3249307618.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | mean x: 1774397130.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | mean y: 2545433.8
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | intersect: -16060752980.889847
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | chi2: 0.0006619261494767102
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | current chi2=0.0006619261494767102 (change=74.06913594332926 %)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,368 | INFO     | sum of square deviations: 310052325.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | sum of deviations: 2566878688.4999995
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | mean x: 1774397282.5
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | mean y: 2547556.13
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | intersect: -14687432818.574701
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | chi2: 0.00041460083669313995
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | current chi2=0.00041460083669313995 (change=37.36448740982582 %)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | sum of square deviations: 265828240.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | sum of deviations: 2096906781.0000024
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | mean x: 1774397435.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | mean y: 2549172.0315789473
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | intersect: -13994255733.423578
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | chi2: 0.00036100338012354027
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | current chi2=0.00036100338012354027 (change=12.927483937826437 %)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,369 | INFO     | left removable region: 40
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | sum of square deviations: 101843770.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | sum of deviations: 769454487.9999999
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | mean x: 1774397862.0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | mean y: 2554536.275362319
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | intersect: -13403453493.607117
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | chi2: 0.00011411712241040496
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | current memory leak: 7.56 B/s (using 69 data points, chi2=0.00)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | could have reported an average CPU frequency of 2848 MHz (7 samples)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | ..............................
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | . Timing measurements:
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | . get job = 0 s
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | . initial setup = 2 s
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | . payload setup = 3 s
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | . stage-in = 0 s
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | . payload execution = 7011 s
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | . stage-out = 0 s
[2026-03-25 02:00:28] 2026-03-25 00:59:22,370 | INFO     | . log creation = 0 s
[2026-03-25 02:00:28] 2026-03-25 00:59:22,371 | INFO     | ..............................
[2026-03-25 02:00:28] 2026-03-25 00:59:22,417 | INFO     | 
[2026-03-25 02:00:28] 2026-03-25 00:59:22,417 | INFO     | job summary report
[2026-03-25 02:00:28] 2026-03-25 00:59:22,417 | INFO     | --------------------------------------------------
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | PanDA job id: 7056974183
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | task id: 49181154
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | errors: (none)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | pilot state: finished 
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | transexitcode: 0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | exeerrorcode: 0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | exeerrordiag: 
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | exitcode: 0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | exitmsg: OK
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | cpuconsumptiontime: 52514 s
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | nevents: 400
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | neventsw: 0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | pid: 12886
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | pgrp: 12886
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | corecount: 8
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | event service: False
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | sizes: {0: 2280421, 11: 2280421, 7018: 2307854, 7019: 2316938, 7020: 2317076}
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | --------------------------------------------------
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | 
[2026-03-25 02:00:28] 2026-03-25 00:59:22,418 | INFO     | executing command: ls -lF /tmp/job_11389010/atlas/pilot/slots/0
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 02:00:28] 2026-03-25 00:59:22,429 | INFO     | job 7056974183 has completed (purged errors)
[2026-03-25 02:00:28] 2026-03-25 00:59:22,429 | INFO     | overall cleanup function is called
[2026-03-25 02:00:28] 2026-03-25 00:59:23,435 | INFO     | --- collectZombieJob: --- 10, [12886]
[2026-03-25 02:00:28] 2026-03-25 00:59:23,435 | INFO     | zombie collector waiting for pid 12886
[2026-03-25 02:00:28] 2026-03-25 00:59:23,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 02:00:28] 2026-03-25 00:59:23,435 | INFO     | collected zombie processes
[2026-03-25 02:00:28] 2026-03-25 00:59:23,435 | INFO     | will attempt to kill all subprocesses of pid=12886
[2026-03-25 02:00:28] 2026-03-25 00:59:23,534 | INFO     | process IDs to be killed: [12886] (in reverse order)
[2026-03-25 02:00:28] 2026-03-25 00:59:23,570 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 02:00:28] 2026-03-25 00:59:23,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 02:00:28] 2026-03-25 00:59:23,574 | INFO     | did not find any defunct processes belonging to 12886
[2026-03-25 02:00:28] 2026-03-25 00:59:23,577 | INFO     | did not find any defunct processes belonging to 12886
[2026-03-25 02:00:28] 2026-03-25 00:59:23,577 | INFO     | ready for new job
[2026-03-25 02:00:28] 2026-03-25 00:59:23,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 02:00:28] 2026-03-25 00:59:23,578 | INFO     | **************************************
[2026-03-25 02:00:28] 2026-03-25 00:59:23,578 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 02:00:28] 2026-03-25 00:59:23,578 | INFO     | **************************************
[2026-03-25 02:00:28] 2026-03-25 00:59:23,578 | INFO     | 
[2026-03-25 02:00:28] 2026-03-25 00:59:23,593 | INFO     | architecture information:
[2026-03-25 02:00:28] 2026-03-25 00:59:23,593 | INFO     | executing command: cat /etc/os-release
[2026-03-25 02:00:28] 2026-03-25 00:59:23,599 | INFO     | cat /etc/os-release:
[2026-03-25 02:00:28] NAME="CentOS Linux"
[2026-03-25 02:00:28] VERSION="7 (Core)"
[2026-03-25 02:00:28] ID="centos"
[2026-03-25 02:00:28] ID_LIKE="rhel fedora"
[2026-03-25 02:00:28] VERSION_ID="7"
[2026-03-25 02:00:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 02:00:28] ANSI_COLOR="0;31"
[2026-03-25 02:00:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 02:00:28] HOME_URL="https://www.centos.org/"
[2026-03-25 02:00:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 02:00:28] 
[2026-03-25 02:00:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 02:00:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 02:00:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 02:00:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 02:00:28] 
[2026-03-25 02:00:28] 2026-03-25 00:59:23,599 | INFO     | **************************************
[2026-03-25 02:00:28] 2026-03-25 00:59:24,101 | INFO     | executing command: df -mP /tmp/job_11389010/atlas/pilot/slots/0
[2026-03-25 02:00:28] 2026-03-25 00:59:24,108 | INFO     | sufficient remaining disk space (100865671168 B)
[2026-03-25 02:00:28] 2026-03-25 00:59:24,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 02:00:28] 2026-03-25 00:59:24,108 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 02:00:28] 2026-03-25 00:59:24,108 | INFO     | update_server=False
[2026-03-25 02:00:28] 2026-03-25 00:59:24,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 02:00:28] 2026-03-25 00:59:24,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 02:00:28] 2026-03-25 00:59:24,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 02:00:28] 2026-03-25 00:59:24,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 02:00:28] 2026-03-25 00:59:24,109 | INFO     | aborting loop
[2026-03-25 02:00:28] 2026-03-25 00:59:24,182 | INFO     | all job control threads have been joined
[2026-03-25 02:00:28] 2026-03-25 00:59:25,114 | INFO     | [job] retrieve thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:25,114 | INFO     | [job] queue monitor thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:25,114 | INFO     | [job] job monitor thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:25,188 | INFO     | [job] control thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:25,198 | INFO     | all data control threads have been joined
[2026-03-25 02:00:28] 2026-03-25 00:59:25,516 | INFO     | all payload control threads have been joined
[2026-03-25 02:00:28] 2026-03-25 00:59:25,836 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:25,836 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:25,915 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:26,010 | INFO     | [job] validate thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:26,023 | INFO     | [data] copytool_in thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:26,114 | INFO     | [data] copytool_out thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:26,181 | INFO     | [payload] validate_post thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:26,204 | INFO     | [data] control thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:26,295 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:26,494 | INFO     | [payload] failed_post thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:26,521 | INFO     | [payload] control thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:26,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 02:00:28] 2026-03-25 00:59:30,905 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 02:00:28] 2026-03-25 00:59:55,175 | INFO     | PID=8156 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-25 02:00:28] 2026-03-25 00:59:55,175 | INFO     | .. there are 3 such processes running
[2026-03-25 02:00:28] 2026-03-25 00:59:55,176 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 02:00:28] 2026-03-25 00:59:55,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 02:00:28] 2026-03-25 00:59:55,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 02:00:28] 2026-03-25 01:00:21,980 | INFO     | [monitor] cgroup control has ended
[2026-03-25 02:00:28] 2026-03-25 01:00:22,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-25 02:00:28] 2026-03-25 01:00:23,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 02:00:28] 2026-03-25 01:00:23,312 | INFO     | [monitor] control thread has ended
[2026-03-25 02:00:28] 2026-03-25 01:00:27,918 | INFO     | all workflow threads have been joined
[2026-03-25 02:00:28] 2026-03-25 01:00:27,918 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 02:00:28] 2026-03-25 01:00:27,919 | INFO     | traces error code: 0
[2026-03-25 02:00:28] 2026-03-25 01:00:27,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 02:00:28] 2026-03-25 01:00:27,969 [wrapper] ==== pilot stdout END ====
[2026-03-25 02:00:28] 2026-03-25 01:00:27,971 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 02:00:28] 2026-03-25 01:00:27,972 [wrapper] pilotpid: 8156
[2026-03-25 02:00:28] 2026-03-25 01:00:27,973 [wrapper] Pilot exit status: 0
[2026-03-25 02:00:28] 2026-03-25 01:00:27,977 [wrapper] pandaids: 7056974183
[2026-03-25 02:00:28] 2026-03-25 01:00:28,001 [wrapper] cleanup supervisor_pilot 23109 8157
[2026-03-25 02:00:28] 2026-03-25 01:00:28,002 [wrapper] Test setup, not cleaning
[2026-03-25 02:00:28] 2026-03-25 01:00:28,003 [wrapper] apfmon messages muted
[2026-03-25 02:00:28] 2026-03-25 01:00:28,004 [wrapper] ==== wrapper stdout END ====
[2026-03-25 02:00:28] 2026-03-25 01:00:28,005 [wrapper] ==== wrapper stderr END ====
[2026-03-25 02:00:28]  *** Error codes and diagnostics ***
[2026-03-25 02:00:28]     "exeErrorCode": 0,
[2026-03-25 02:00:28]     "exeErrorDiag": "",
[2026-03-25 02:00:28]     "pilotErrorCode": 0,
[2026-03-25 02:00:28]     "pilotErrorDiag": "",
[2026-03-25 02:00:28]  *** Listing of results directory ***
[2026-03-25 02:00:28] total 487948
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user    585013 Mar 16 17:03 pilot3.tar.gz
[2026-03-25 02:00:28] -rwx------ 1 mf493845 unix-user     36322 Mar 16 17:41 runpilot2-wrapper.sh
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user      5111 Mar 16 17:43 queuedata.json
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user       100 Mar 24 22:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 02:00:28] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 22:59 run_atlas
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user       105 Mar 24 22:59 job.xml
[2026-03-25 02:00:28] -rw-r--r-- 2 mf493845 unix-user 244607034 Mar 25 00:02 EVNT.49134557._000007.pool.root.1
[2026-03-25 02:00:28] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 00:02 start_atlas.sh
[2026-03-25 02:00:28] drwxrwx--x 2 mf493845 unix-user       100 Mar 25 00:02 shared
[2026-03-25 02:00:28] -rw-r--r-- 2 mf493845 unix-user    597545 Mar 25 00:02 input.tar.gz
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user      6389 Mar 25 00:02 init_data.xml
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user         0 Mar 25 00:02 boinc_setup_complete
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user      8192 Mar 25 00:02 boinc_mmap_file
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user         0 Mar 25 00:02 boinc_lockfile
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user      2612 Mar 25 00:02 pandaJob.out
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user   1010852 Mar 25 00:02 agis_schedconf.cvmfs.json
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user   1511579 Mar 25 00:02 agis_ddmendpoints.agis.ALL.json
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user       420 Mar 25 00:02 workernode_map.json
[2026-03-25 02:00:28] drwx------ 5 mf493845 unix-user       440 Mar 25 00:02 pilot3
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user 248363549 Mar 25 01:58 HITS.49181154._000159.pool.root.1
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user      1022 Mar 25 01:59 memory_monitor_summary.json
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user    355271 Mar 25 01:59 log.49181154._000159.job.log.tgz.1
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user      6305 Mar 25 01:59 heartbeat.json
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user        95 Mar 25 01:59 pilot_heartbeat.json
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user      4830 Mar 25 02:00 pilotlog.txt
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user   1034295 Mar 25 02:00 log.49181154._000159.job.log.1
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user       357 Mar 25 02:00 output.list
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user       620 Mar 25 02:00 runtime_log
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user   1402880 Mar 25 02:00 result.tar.gz
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user      9219 Mar 25 02:00 runtime_log.err
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user       644 Mar 25 02:00 EJ7MDmOBQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGMvLDm0KeKIm.diag
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user     21304 Mar 25 02:00 stderr.txt
[2026-03-25 02:00:28] HITS file was successfully produced:
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user 248363549 Mar 25 01:58 shared/HITS.pool.root.1
[2026-03-25 02:00:28]  *** Contents of shared directory: ***
[2026-03-25 02:00:28] total 483392
[2026-03-25 02:00:28] -rw-r--r-- 2 mf493845 unix-user 244607034 Mar 25 00:02 ATLAS.root_0
[2026-03-25 02:00:28] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 25 00:02 start_atlas.sh
[2026-03-25 02:00:28] -rw-r--r-- 2 mf493845 unix-user    597545 Mar 25 00:02 input.tar.gz
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user 248363549 Mar 25 01:58 HITS.pool.root.1
[2026-03-25 02:00:28] -rw------- 1 mf493845 unix-user   1402880 Mar 25 02:00 result.tar.gz
02:00:29 (4295): run_atlas exited; CPU time 52613.112474
02:00:29 (4295): called boinc_finish(0)

</stderr_txt>
]]>

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