Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:53:58 (26667): wrapper (7.7.26015): starting
23:53:58 (26667): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 23:53:58] Arguments: --nthreads 8
[2026-03-24 23:53:58] Threads: 8
[2026-03-24 23:53:58] Checking for CVMFS
[2026-03-24 23:53:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 23:53:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 23:53:58] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 23:53:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 23:53:59] 2.11.0.0 8171 236217 108164 157660 2 1 2770187 4096001 0 130560 2 18840629 99.688 13133554 366 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 23:53:59] CVMFS is ok
[2026-03-24 23:53:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 23:53:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 23:53:59] Further information can be found at the LHC@home message board.
[2026-03-24 23:53:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 23:53:59] Checking for apptainer binary...
[2026-03-24 23:53:59] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 23:53:59] apptainer is not installed, using version from CVMFS
[2026-03-24 23:53:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 23:53:59] WARNING: Environment variable TMPDIR already has value [/tmp/job_11388956/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node073
[2026-03-24 23:53:59] apptainer works
[2026-03-24 23:53:59] Set ATHENA_PROC_NUMBER=8
[2026-03-24 23:53:59] Set ATHENA_CORE_NUMBER=8
[2026-03-24 23:53:59] Starting ATLAS job with PandaID=7056970626
[2026-03-24 23:53:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11388956/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 02:06:44]  *** The last 200 lines of the pilot log: ***
[2026-03-25 02:06:44] 2026-03-25 01:06:12,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 02:06:44] 2026-03-25 01:06:12,162 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 02:06:44] 2026-03-25 01:06:12,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 02:06:44] 2026-03-25 01:06:12,164 | INFO     | fitting pss+swap vs Time
[2026-03-25 02:06:44] 2026-03-25 01:06:12,164 | INFO     | sum of square deviations: 681212772.5
[2026-03-25 02:06:44] 2026-03-25 01:06:12,164 | INFO     | sum of deviations: 18467417123.0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,164 | INFO     | mean x: 1774396801.5
[2026-03-25 02:06:44] 2026-03-25 01:06:12,164 | INFO     | mean y: 2512743.923076923
[2026-03-25 02:06:44] 2026-03-25 01:06:12,164 | INFO     | intersect: -48100704338.691925
[2026-03-25 02:06:44] 2026-03-25 01:06:12,164 | INFO     | chi2: 1.0904593273741248
[2026-03-25 02:06:44] 2026-03-25 01:06:12,164 | INFO     | sum of square deviations: 605592750.0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,165 | INFO     | sum of deviations: 17078873085.999996
[2026-03-25 02:06:44] 2026-03-25 01:06:12,165 | INFO     | mean x: 1774396649.0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,165 | INFO     | mean y: 2509950.88
[2026-03-25 02:06:44] 2026-03-25 01:06:12,165 | INFO     | intersect: -50038867150.3067
[2026-03-25 02:06:44] 2026-03-25 01:06:12,165 | INFO     | chi2: 1.091597882008836
[2026-03-25 02:06:44] 2026-03-25 01:06:12,165 | INFO     | current chi2=1.091597882008836 (change=-0.10441055490375983 %)
[2026-03-25 02:06:44] 2026-03-25 01:06:12,165 | INFO     | right removable region: 124
[2026-03-25 02:06:44] 2026-03-25 01:06:12,165 | INFO     | sum of square deviations: 605592750.0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,165 | INFO     | sum of deviations: 3762680202.0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | mean x: 1774396954.0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | mean y: 2541812.464
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | intersect: -11022174532.480526
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | chi2: 0.0019035551493744815
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | current chi2=0.0019035551493744815 (change=99.82543547461249 %)
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | sum of square deviations: 535786790.0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | sum of deviations: 3554661112.999999
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | mean x: 1774397106.5
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | mean y: 2542268.216666667
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | intersect: -11769641203.300552
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | chi2: 0.0017095720090382618
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | current chi2=0.0017095720090382618 (change=10.190571069084262 %)
[2026-03-25 02:06:44] 2026-03-25 01:06:12,166 | INFO     | left removable region: 20
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | sum of square deviations: 348769330.0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | sum of deviations: 1938713925.5
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | mean x: 1774397228.5
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | mean y: 2542486.375
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | intersect: -9860849504.719961
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | chi2: 0.0004514644822177116
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | current memory leak: 5.56 B/s (using 104 data points, chi2=0.00)
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | could have reported an average CPU frequency of 2364 MHz (8 samples)
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | ..............................
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | . Timing measurements:
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | . get job = 0 s
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | . initial setup = 2 s
[2026-03-25 02:06:44] 2026-03-25 01:06:12,167 | INFO     | . payload setup = 4 s
[2026-03-25 02:06:44] 2026-03-25 01:06:12,168 | INFO     | . stage-in = 0 s
[2026-03-25 02:06:44] 2026-03-25 01:06:12,168 | INFO     | . payload execution = 7900 s
[2026-03-25 02:06:44] 2026-03-25 01:06:12,168 | INFO     | . stage-out = 0 s
[2026-03-25 02:06:44] 2026-03-25 01:06:12,168 | INFO     | . log creation = 0 s
[2026-03-25 02:06:44] 2026-03-25 01:06:12,168 | INFO     | ..............................
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | 
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | job summary report
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | --------------------------------------------------
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | PanDA job id: 7056970626
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | task id: 49180885
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | errors: (none)
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | pilot state: finished 
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | transexitcode: 0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | exeerrorcode: 0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | exeerrordiag: 
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | exitcode: 0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | exitmsg: OK
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | cpuconsumptiontime: 58839 s
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | nevents: 400
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | neventsw: 0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,214 | INFO     | pid: 5049
[2026-03-25 02:06:44] 2026-03-25 01:06:12,215 | INFO     | pgrp: 5049
[2026-03-25 02:06:44] 2026-03-25 01:06:12,215 | INFO     | corecount: 8
[2026-03-25 02:06:44] 2026-03-25 01:06:12,215 | INFO     | event service: False
[2026-03-25 02:06:44] 2026-03-25 01:06:12,215 | INFO     | sizes: {0: 2280424, 11: 2280424, 7907: 2308284, 7908: 2317312, 7911: 2317562}
[2026-03-25 02:06:44] 2026-03-25 01:06:12,215 | INFO     | --------------------------------------------------
[2026-03-25 02:06:44] 2026-03-25 01:06:12,215 | INFO     | 
[2026-03-25 02:06:44] 2026-03-25 01:06:12,215 | INFO     | executing command: ls -lF /tmp/job_11388956/atlas/pilot/slots/0
[2026-03-25 02:06:44] 2026-03-25 01:06:12,224 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,224 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,224 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,224 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | job 7056970626 has completed (purged errors)
[2026-03-25 02:06:44] 2026-03-25 01:06:12,225 | INFO     | overall cleanup function is called
[2026-03-25 02:06:44] 2026-03-25 01:06:12,618 | INFO     | PID=31627 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 02:06:44] 2026-03-25 01:06:13,015 | WARNING  | process 5049 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 02:06:44] 2026-03-25 01:06:13,085 | INFO     | using path: /tmp/job_11388956/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 02:06:44] 2026-03-25 01:06:13,085 | INFO     | using path: /tmp/job_11388956/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 02:06:44] 2026-03-25 01:06:13,086 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-25 02:06:44] 2026-03-25 01:06:13,086 | WARNING  | maxPSS not found in memory monitor output
[2026-03-25 02:06:44] 2026-03-25 01:06:13,086 | INFO     | skipping file size check of payload stdout file (/tmp/job_11388956/atlas/pilot/slots/0/PanDA_Pilot-7056970626/payload.stdout) since it has not been created yet
[2026-03-25 02:06:44] 2026-03-25 01:06:13,086 | INFO     | executing command: df -mP /tmp/job_11388956/atlas/pilot/slots/0
[2026-03-25 02:06:44] 2026-03-25 01:06:13,093 | INFO     | sufficient remaining disk space (228018094080 B)
[2026-03-25 02:06:44] 2026-03-25 01:06:13,093 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-25 02:06:44] 2026-03-25 01:06:13,093 | INFO     | output file size check: skipping output file /tmp/job_11388956/atlas/pilot/slots/0/PanDA_Pilot-7056970626/HITS.49180885._000101.pool.root.1 since it does not exist
[2026-03-25 02:06:44] 2026-03-25 01:06:13,180 | INFO     | number of running child processes to parent process 5049: 1
[2026-03-25 02:06:44] 2026-03-25 01:06:13,180 | INFO     | maximum number of monitored processes: 6
[2026-03-25 02:06:44] 2026-03-25 01:06:13,180 | INFO     | aborting job monitoring since job object (job id=7056970626) has expired
[2026-03-25 02:06:44] 2026-03-25 01:06:13,231 | INFO     | --- collectZombieJob: --- 10, [5049]
[2026-03-25 02:06:44] 2026-03-25 01:06:13,231 | INFO     | zombie collector waiting for pid 5049
[2026-03-25 02:06:44] 2026-03-25 01:06:13,231 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 02:06:44] 2026-03-25 01:06:13,231 | INFO     | collected zombie processes
[2026-03-25 02:06:44] 2026-03-25 01:06:13,231 | INFO     | will attempt to kill all subprocesses of pid=5049
[2026-03-25 02:06:44] 2026-03-25 01:06:13,315 | INFO     | process IDs to be killed: [5049] (in reverse order)
[2026-03-25 02:06:44] 2026-03-25 01:06:13,344 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 02:06:44] 2026-03-25 01:06:13,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 02:06:44] 2026-03-25 01:06:13,347 | INFO     | did not find any defunct processes belonging to 5049
[2026-03-25 02:06:44] 2026-03-25 01:06:13,350 | INFO     | did not find any defunct processes belonging to 5049
[2026-03-25 02:06:44] 2026-03-25 01:06:13,350 | INFO     | ready for new job
[2026-03-25 02:06:44] 2026-03-25 01:06:13,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 02:06:44] 2026-03-25 01:06:13,351 | INFO     | **************************************
[2026-03-25 02:06:44] 2026-03-25 01:06:13,351 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 02:06:44] 2026-03-25 01:06:13,351 | INFO     | **************************************
[2026-03-25 02:06:44] 2026-03-25 01:06:13,351 | INFO     | 
[2026-03-25 02:06:44] 2026-03-25 01:06:13,365 | INFO     | architecture information:
[2026-03-25 02:06:44] 2026-03-25 01:06:13,366 | INFO     | executing command: cat /etc/os-release
[2026-03-25 02:06:44] 2026-03-25 01:06:13,371 | INFO     | cat /etc/os-release:
[2026-03-25 02:06:44] NAME="CentOS Linux"
[2026-03-25 02:06:44] VERSION="7 (Core)"
[2026-03-25 02:06:44] ID="centos"
[2026-03-25 02:06:44] ID_LIKE="rhel fedora"
[2026-03-25 02:06:44] VERSION_ID="7"
[2026-03-25 02:06:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 02:06:44] ANSI_COLOR="0;31"
[2026-03-25 02:06:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 02:06:44] HOME_URL="https://www.centos.org/"
[2026-03-25 02:06:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 02:06:44] 
[2026-03-25 02:06:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 02:06:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 02:06:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 02:06:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 02:06:44] 
[2026-03-25 02:06:44] 2026-03-25 01:06:13,372 | INFO     | **************************************
[2026-03-25 02:06:44] 2026-03-25 01:06:13,874 | INFO     | executing command: df -mP /tmp/job_11388956/atlas/pilot/slots/0
[2026-03-25 02:06:44] 2026-03-25 01:06:13,880 | INFO     | sufficient remaining disk space (228020191232 B)
[2026-03-25 02:06:44] 2026-03-25 01:06:13,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 02:06:44] 2026-03-25 01:06:13,880 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 02:06:44] 2026-03-25 01:06:13,880 | INFO     | update_server=False
[2026-03-25 02:06:44] 2026-03-25 01:06:13,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 02:06:44] 2026-03-25 01:06:13,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 02:06:44] 2026-03-25 01:06:13,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 02:06:44] 2026-03-25 01:06:13,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 02:06:44] 2026-03-25 01:06:13,881 | INFO     | will abort loop
[2026-03-25 02:06:44] 2026-03-25 01:06:14,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 02:06:44] 2026-03-25 01:06:14,616 | INFO     | all data control threads have been joined
[2026-03-25 02:06:44] 2026-03-25 01:06:14,626 | INFO     | all payload control threads have been joined
[2026-03-25 02:06:44] 2026-03-25 01:06:14,687 | INFO     | all job control threads have been joined
[2026-03-25 02:06:44] 2026-03-25 01:06:14,886 | INFO     | [job] retrieve thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:14,886 | INFO     | [job] queue monitor thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:14,886 | INFO     | [job] job monitor thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:15,167 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:15,541 | INFO     | [payload] failed_post thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:15,621 | INFO     | [data] control thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:15,630 | INFO     | [payload] control thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:15,692 | INFO     | [job] control thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:15,846 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:15,846 | INFO     | [job] validate thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:15,882 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:15,885 | INFO     | [payload] validate_post thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:16,159 | INFO     | [data] copytool_in thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:16,440 | INFO     | [data] copytool_out thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:17,886 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:22,509 | INFO     | [monitor] cgroup control has ended
[2026-03-25 02:06:44] 2026-03-25 01:06:24,191 | INFO     | job.realtimelogging is not enabled
[2026-03-25 02:06:44] 2026-03-25 01:06:25,197 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 02:06:44] 2026-03-25 01:06:26,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067393280)>']
[2026-03-25 02:06:44] 2026-03-25 01:06:32,004 | INFO     | all workflow threads have been joined
[2026-03-25 02:06:44] 2026-03-25 01:06:32,004 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 02:06:44] 2026-03-25 01:06:32,004 | INFO     | traces error code: 0
[2026-03-25 02:06:44] 2026-03-25 01:06:32,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 02:06:44] 2026-03-25 01:06:44,790 | INFO     | PID=31627 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 02:06:44] 2026-03-25 01:06:44,790 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 02:06:44] 2026-03-25 01:06:44,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 02:06:44] 2026-03-25 01:06:44,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 02:06:44] 2026-03-25 01:06:44,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 02:06:44] 2026-03-25 01:06:44,791 | INFO     | [monitor] control thread has ended
[2026-03-25 02:06:44] 2026-03-25 01:06:44,843 [wrapper] ==== pilot stdout END ====
[2026-03-25 02:06:44] 2026-03-25 01:06:44,845 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 02:06:44] 2026-03-25 01:06:44,846 [wrapper] pilotpid: 31627
[2026-03-25 02:06:44] 2026-03-25 01:06:44,847 [wrapper] Pilot exit status: 0
[2026-03-25 02:06:44] 2026-03-25 01:06:44,851 [wrapper] pandaids: 7056970626
[2026-03-25 02:06:44] 2026-03-25 01:06:44,871 [wrapper] cleanup supervisor_pilot 21165 31628
[2026-03-25 02:06:44] 2026-03-25 01:06:44,872 [wrapper] Test setup, not cleaning
[2026-03-25 02:06:44] 2026-03-25 01:06:44,873 [wrapper] apfmon messages muted
[2026-03-25 02:06:44] 2026-03-25 01:06:44,875 [wrapper] ==== wrapper stdout END ====
[2026-03-25 02:06:44] 2026-03-25 01:06:44,876 [wrapper] ==== wrapper stderr END ====
[2026-03-25 02:06:44]  *** Error codes and diagnostics ***
[2026-03-25 02:06:44]     "exeErrorCode": 0,
[2026-03-25 02:06:44]     "exeErrorDiag": "",
[2026-03-25 02:06:44]     "pilotErrorCode": 0,
[2026-03-25 02:06:44]     "pilotErrorDiag": "",
[2026-03-25 02:06:44]  *** Listing of results directory ***
[2026-03-25 02:06:44] total 489256
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user    585013 Mar 16 17:03 pilot3.tar.gz
[2026-03-25 02:06:44] -rwx------ 1 mf493845 unix-user     36322 Mar 16 17:39 runpilot2-wrapper.sh
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user      5111 Mar 16 17:40 queuedata.json
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user       100 Mar 24 22:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 02:06:44] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 22:51 run_atlas
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user       105 Mar 24 22:51 job.xml
[2026-03-25 02:06:44] -rw-r--r-- 2 mf493845 unix-user 245525082 Mar 24 23:53 EVNT.49134059._000005.pool.root.1
[2026-03-25 02:06:44] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:53 start_atlas.sh
[2026-03-25 02:06:44] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 23:53 shared
[2026-03-25 02:06:44] -rw-r--r-- 2 mf493845 unix-user    597530 Mar 24 23:53 input.tar.gz
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user      6389 Mar 24 23:53 init_data.xml
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user         0 Mar 24 23:53 boinc_setup_complete
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user      8192 Mar 24 23:53 boinc_mmap_file
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user         0 Mar 24 23:53 boinc_lockfile
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user      2612 Mar 24 23:53 pandaJob.out
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user   1010852 Mar 24 23:54 agis_schedconf.cvmfs.json
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user   1511579 Mar 24 23:54 agis_ddmendpoints.agis.ALL.json
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user       416 Mar 24 23:54 workernode_map.json
[2026-03-25 02:06:44] drwx------ 5 mf493845 unix-user       440 Mar 24 23:54 pilot3
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user 248532014 Mar 25 02:05 HITS.49180885._000101.pool.root.1
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user        95 Mar 25 02:06 pilot_heartbeat.json
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user      1022 Mar 25 02:06 memory_monitor_summary.json
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user    356053 Mar 25 02:06 log.49180885._000101.job.log.tgz.1
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user      6298 Mar 25 02:06 heartbeat.json
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user       745 Mar 25 02:06 pilotlog.txt
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user   1160463 Mar 25 02:06 log.49180885._000101.job.log.1
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user       357 Mar 25 02:06 output.list
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user       620 Mar 25 02:06 runtime_log
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user   1536000 Mar 25 02:06 result.tar.gz
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user       646 Mar 25 02:06 uZmLDmr9PM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvRyLDmHdKqJo.diag
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user      9219 Mar 25 02:06 runtime_log.err
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user     22039 Mar 25 02:06 stderr.txt
[2026-03-25 02:06:44] HITS file was successfully produced:
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user 248532014 Mar 25 02:05 shared/HITS.pool.root.1
[2026-03-25 02:06:44]  *** Contents of shared directory: ***
[2026-03-25 02:06:44] total 484580
[2026-03-25 02:06:44] -rw-r--r-- 2 mf493845 unix-user 245525082 Mar 24 23:53 ATLAS.root_0
[2026-03-25 02:06:44] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:53 start_atlas.sh
[2026-03-25 02:06:44] -rw-r--r-- 2 mf493845 unix-user    597530 Mar 24 23:53 input.tar.gz
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user 248532014 Mar 25 02:05 HITS.pool.root.1
[2026-03-25 02:06:44] -rw------- 1 mf493845 unix-user   1536000 Mar 25 02:06 result.tar.gz
02:06:46 (26667): run_atlas exited; CPU time 58956.003940
02:06:46 (26667): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN