Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:09:14 (13174): wrapper (7.7.26015): starting
23:09:14 (13174): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 23:09:14] Arguments: --nthreads 8
[2026-03-24 23:09:14] Threads: 8
[2026-03-24 23:09:14] Checking for CVMFS
[2026-03-24 23:09:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 23:09:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 23:09:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 23:09:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 23:09:14] 2.11.0.0 5254 236318 76784 157658 0 188 2627383 4096001 3615 130560 2 15407922 99.626 11524445 366 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 23:09:14] CVMFS is ok
[2026-03-24 23:09:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 23:09:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 23:09:14] Further information can be found at the LHC@home message board.
[2026-03-24 23:09:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 23:09:14] Checking for apptainer binary...
[2026-03-24 23:09:14] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 23:09:14] apptainer is not installed, using version from CVMFS
[2026-03-24 23:09:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 23:09:14] WARNING: Environment variable TMPDIR already has value [/tmp/job_11388464/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node080
[2026-03-24 23:09:14] apptainer works
[2026-03-24 23:09:14] Set ATHENA_PROC_NUMBER=8
[2026-03-24 23:09:14] Set ATHENA_CORE_NUMBER=8
[2026-03-24 23:09:14] Starting ATLAS job with PandaID=7056933460
[2026-03-24 23:09:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11388464/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 01:13:41]  *** The last 200 lines of the pilot log: ***
[2026-03-25 01:13:41] 2026-03-25 00:12:33,097 | INFO     | log transfer has been attempted: DONE
[2026-03-25 01:13:41] 2026-03-25 00:12:33,097 | INFO     | job 7056933460 has finished - writing final server update
[2026-03-25 01:13:41] 2026-03-25 00:12:33,097 | INFO     | total number of processed events: 400 (read)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,133 | INFO     | using path: /tmp/job_11388464/atlas/pilot/slots/0/PanDA_Pilot-7056933460/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,133 | INFO     | extracted standard info from prmon json
[2026-03-25 01:13:41] 2026-03-25 00:12:33,133 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 01:13:41] 2026-03-25 00:12:33,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 01:13:41] 2026-03-25 00:12:33,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 01:13:41] 2026-03-25 00:12:33,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 01:13:41] 2026-03-25 00:12:33,134 | INFO     | fitting pss+swap vs Time
[2026-03-25 01:13:41] 2026-03-25 00:12:33,135 | INFO     | sum of square deviations: 549294020.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,135 | INFO     | sum of deviations: 17629401380.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,135 | INFO     | mean x: 1774393841.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,135 | INFO     | mean y: 2480007.7603305783
[2026-03-25 01:13:41] 2026-03-25 00:12:33,135 | INFO     | intersect: -56946075938.996376
[2026-03-25 01:13:41] 2026-03-25 00:12:33,135 | INFO     | chi2: 1.1294795478353137
[2026-03-25 01:13:41] 2026-03-25 00:12:33,135 | INFO     | sum of square deviations: 483971865.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | sum of deviations: 16490077479.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | mean x: 1774393688.5
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | mean y: 2477346.9482758623
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | intersect: -60455354022.26487
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | chi2: 1.1308400731902728
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | current chi2=1.1308400731902728 (change=-0.12045595314820995 %)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | right removable region: 115
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | sum of square deviations: 483971865.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | sum of deviations: 3713082810.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | mean x: 1774393993.5
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | mean y: 2511744.5172413792
[2026-03-25 01:13:41] 2026-03-25 00:12:33,136 | INFO     | intersect: -13610824715.510456
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | chi2: 0.0008033054938996623
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | current chi2=0.0008033054938996623 (change=99.92887826119214 %)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | sum of square deviations: 424045160.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | sum of deviations: 2875342054.9999986
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | mean x: 1774394146.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | mean y: 2513867.7027027025
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | intersect: -12029200184.026144
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | chi2: 0.0002916884945038013
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | current chi2=0.0002916884945038013 (change=63.68897054496742 %)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,137 | INFO     | sum of square deviations: 369281342.5
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | sum of deviations: 2386190253.000001
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | mean x: 1774394298.5
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | mean y: 2515226.1886792453
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | intersect: -11463112447.810244
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | chi2: 0.00023501682027837048
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | current chi2=0.00023501682027837048 (change=19.428834284957468 %)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | left removable region: 30
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | sum of square deviations: 190403570.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | sum of deviations: 1142554034.0000005
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | mean x: 1774394573.0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | mean y: 2516430.9176470586
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | intersect: -10645086853.458054
[2026-03-25 01:13:41] 2026-03-25 00:12:33,138 | INFO     | chi2: 0.00017505305876227534
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | current memory leak: 6.00 B/s (using 85 data points, chi2=0.00)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | could have reported an average CPU frequency of 2483 MHz (8 samples)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | ..............................
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | . Timing measurements:
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | . get job = 0 s
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | . initial setup = 3 s
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | . payload setup = 4 s
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | . stage-in = 0 s
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | . payload execution = 7365 s
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | . stage-out = 0 s
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | . log creation = 0 s
[2026-03-25 01:13:41] 2026-03-25 00:12:33,139 | INFO     | ..............................
[2026-03-25 01:13:41] 2026-03-25 00:12:33,210 | INFO     | time since job start (7390s) is within the limit (345600.0s)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | 
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | job summary report
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | --------------------------------------------------
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | PanDA job id: 7056933460
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | task id: 49178177
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | errors: (none)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | pilot state: finished 
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | transexitcode: 0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | exeerrorcode: 0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | exeerrordiag: 
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | exitcode: 0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | exitmsg: OK
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | cpuconsumptiontime: 55750 s
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | nevents: 400
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | neventsw: 0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | pid: 23992
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | pgrp: 23992
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | corecount: 8
[2026-03-25 01:13:41] 2026-03-25 00:12:33,599 | INFO     | event service: False
[2026-03-25 01:13:41] 2026-03-25 00:12:33,600 | INFO     | sizes: {0: 2280029, 1: 2280544, 11: 2280544, 7373: 2308031, 7374: 2317059, 7377: 2317115, 7379: 2317437}
[2026-03-25 01:13:41] 2026-03-25 00:12:33,600 | INFO     | --------------------------------------------------
[2026-03-25 01:13:41] 2026-03-25 00:12:33,600 | INFO     | 
[2026-03-25 01:13:41] 2026-03-25 00:12:33,600 | INFO     | executing command: ls -lF /tmp/job_11388464/atlas/pilot/slots/0
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,612 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,612 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 01:13:41] 2026-03-25 00:12:33,612 | INFO     | job 7056933460 has completed (purged errors)
[2026-03-25 01:13:41] 2026-03-25 00:12:33,612 | INFO     | overall cleanup function is called
[2026-03-25 01:13:41] 2026-03-25 00:12:34,618 | INFO     | --- collectZombieJob: --- 10, [23992]
[2026-03-25 01:13:41] 2026-03-25 00:12:34,618 | INFO     | zombie collector waiting for pid 23992
[2026-03-25 01:13:41] 2026-03-25 00:12:34,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 01:13:41] 2026-03-25 00:12:34,618 | INFO     | collected zombie processes
[2026-03-25 01:13:41] 2026-03-25 00:12:34,618 | INFO     | will attempt to kill all subprocesses of pid=23992
[2026-03-25 01:13:41] 2026-03-25 00:12:34,776 | INFO     | process IDs to be killed: [23992] (in reverse order)
[2026-03-25 01:13:41] 2026-03-25 00:12:34,824 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 01:13:41] 2026-03-25 00:12:34,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 01:13:41] 2026-03-25 00:12:34,830 | INFO     | did not find any defunct processes belonging to 23992
[2026-03-25 01:13:41] 2026-03-25 00:12:34,835 | INFO     | did not find any defunct processes belonging to 23992
[2026-03-25 01:13:41] 2026-03-25 00:12:34,836 | INFO     | ready for new job
[2026-03-25 01:13:41] 2026-03-25 00:12:34,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 01:13:41] 2026-03-25 00:12:34,836 | INFO     | **************************************
[2026-03-25 01:13:41] 2026-03-25 00:12:34,836 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 01:13:41] 2026-03-25 00:12:34,837 | INFO     | **************************************
[2026-03-25 01:13:41] 2026-03-25 00:12:34,837 | INFO     | 
[2026-03-25 01:13:41] 2026-03-25 00:12:34,853 | INFO     | architecture information:
[2026-03-25 01:13:41] 2026-03-25 00:12:34,853 | INFO     | executing command: cat /etc/os-release
[2026-03-25 01:13:41] 2026-03-25 00:12:34,860 | INFO     | cat /etc/os-release:
[2026-03-25 01:13:41] NAME="CentOS Linux"
[2026-03-25 01:13:41] VERSION="7 (Core)"
[2026-03-25 01:13:41] ID="centos"
[2026-03-25 01:13:41] ID_LIKE="rhel fedora"
[2026-03-25 01:13:41] VERSION_ID="7"
[2026-03-25 01:13:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 01:13:41] ANSI_COLOR="0;31"
[2026-03-25 01:13:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 01:13:41] HOME_URL="https://www.centos.org/"
[2026-03-25 01:13:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 01:13:41] 
[2026-03-25 01:13:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 01:13:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 01:13:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 01:13:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 01:13:41] 
[2026-03-25 01:13:41] 2026-03-25 00:12:34,861 | INFO     | **************************************
[2026-03-25 01:13:41] 2026-03-25 00:12:35,363 | INFO     | executing command: df -mP /tmp/job_11388464/atlas/pilot/slots/0
[2026-03-25 01:13:41] 2026-03-25 00:12:35,370 | INFO     | sufficient remaining disk space (226666479616 B)
[2026-03-25 01:13:41] 2026-03-25 00:12:35,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 01:13:41] 2026-03-25 00:12:35,371 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 01:13:41] 2026-03-25 00:12:35,371 | INFO     | update_server=False
[2026-03-25 01:13:41] 2026-03-25 00:12:35,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 01:13:41] 2026-03-25 00:12:35,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:13:41] 2026-03-25 00:12:35,371 | INFO     | aborting loop
[2026-03-25 01:13:41] 2026-03-25 00:12:35,577 | INFO     | all data control threads have been joined
[2026-03-25 01:13:41] 2026-03-25 00:12:35,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 01:13:41] 2026-03-25 00:12:35,873 | INFO     | all job control threads have been joined
[2026-03-25 01:13:41] 2026-03-25 00:12:36,369 | INFO     | all payload control threads have been joined
[2026-03-25 01:13:41] 2026-03-25 00:12:36,376 | INFO     | [job] retrieve thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:36,376 | INFO     | [job] job monitor thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:36,582 | INFO     | [data] control thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:36,635 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:36,878 | INFO     | [job] control thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:37,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 01:13:41] 2026-03-25 00:12:37,283 | INFO     | [payload] validate_post thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:37,374 | INFO     | [payload] control thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:37,464 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:37,506 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:37,542 | INFO     | [data] copytool_in thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:37,585 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:37,592 | INFO     | [payload] failed_post thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:37,602 | INFO     | [job] validate thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:37,773 | INFO     | [data] copytool_out thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:38,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:13:41] 2026-03-25 00:12:39,202 | INFO     | [job] queue monitor thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:12:41,054 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 01:13:41] 2026-03-25 00:13:06,491 | INFO     | PID=17987 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 01:13:41] 2026-03-25 00:13:06,491 | INFO     | .. there are 3 such processes running
[2026-03-25 01:13:41] 2026-03-25 00:13:06,492 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 01:13:41] 2026-03-25 00:13:06,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 01:13:41] 2026-03-25 00:13:06,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 01:13:41] 2026-03-25 00:13:34,804 | INFO     | [monitor] cgroup control has ended
[2026-03-25 01:13:41] 2026-03-25 00:13:35,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456054785792)>']
[2026-03-25 01:13:41] 2026-03-25 00:13:36,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 01:13:41] 2026-03-25 00:13:36,639 | INFO     | [monitor] control thread has ended
[2026-03-25 01:13:41] 2026-03-25 00:13:40,835 | INFO     | all workflow threads have been joined
[2026-03-25 01:13:41] 2026-03-25 00:13:40,835 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 01:13:41] 2026-03-25 00:13:40,835 | INFO     | traces error code: 0
[2026-03-25 01:13:41] 2026-03-25 00:13:40,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 01:13:41] 2026-03-25 00:13:40,894 [wrapper] ==== pilot stdout END ====
[2026-03-25 01:13:41] 2026-03-25 00:13:40,896 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 01:13:41] 2026-03-25 00:13:40,897 [wrapper] pilotpid: 17987
[2026-03-25 01:13:41] 2026-03-25 00:13:40,898 [wrapper] Pilot exit status: 0
[2026-03-25 01:13:41] 2026-03-25 00:13:40,903 [wrapper] pandaids: 7056933460
[2026-03-25 01:13:41] 2026-03-25 00:13:40,938 [wrapper] cleanup supervisor_pilot 12418 17988
[2026-03-25 01:13:41] 2026-03-25 00:13:40,939 [wrapper] Test setup, not cleaning
[2026-03-25 01:13:41] 2026-03-25 00:13:40,940 [wrapper] apfmon messages muted
[2026-03-25 01:13:41] 2026-03-25 00:13:40,942 [wrapper] ==== wrapper stdout END ====
[2026-03-25 01:13:41] 2026-03-25 00:13:40,943 [wrapper] ==== wrapper stderr END ====
[2026-03-25 01:13:41]  *** Error codes and diagnostics ***
[2026-03-25 01:13:41]     "exeErrorCode": 0,
[2026-03-25 01:13:41]     "exeErrorDiag": "",
[2026-03-25 01:13:41]     "pilotErrorCode": 0,
[2026-03-25 01:13:41]     "pilotErrorDiag": "",
[2026-03-25 01:13:41]  *** Listing of results directory ***
[2026-03-25 01:13:41] total 432312
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user    585013 Mar 16 15:08 pilot3.tar.gz
[2026-03-25 01:13:41] -rwx------ 1 mf493845 unix-user     36322 Mar 16 15:08 runpilot2-wrapper.sh
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user      5111 Mar 16 15:10 queuedata.json
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user       100 Mar 24 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 01:13:41] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 22:11 run_atlas
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user       105 Mar 24 22:11 job.xml
[2026-03-25 01:13:41] -rw-r--r-- 2 mf493845 unix-user 227484464 Mar 24 23:09 EVNT.49128225._000005.pool.root.1
[2026-03-25 01:13:41] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:09 start_atlas.sh
[2026-03-25 01:13:41] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 23:09 shared
[2026-03-25 01:13:41] -rw-r--r-- 2 mf493845 unix-user    597562 Mar 24 23:09 input.tar.gz
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user      6389 Mar 24 23:09 init_data.xml
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user         0 Mar 24 23:09 boinc_setup_complete
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user      8192 Mar 24 23:09 boinc_mmap_file
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user         0 Mar 24 23:09 boinc_lockfile
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user      2695 Mar 24 23:09 pandaJob.out
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user   1010852 Mar 24 23:09 agis_schedconf.cvmfs.json
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user   1511579 Mar 24 23:09 agis_ddmendpoints.agis.ALL.json
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user       418 Mar 24 23:09 workernode_map.json
[2026-03-25 01:13:41] drwx------ 5 mf493845 unix-user       440 Mar 24 23:09 pilot3
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user 208430100 Mar 25 01:12 HITS.49178177._000113.pool.root.1
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user        95 Mar 25 01:12 pilot_heartbeat.json
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user      1018 Mar 25 01:12 memory_monitor_summary.json
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user    363702 Mar 25 01:12 log.49178177._000113.job.log.tgz.1
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user      6303 Mar 25 01:12 heartbeat.json
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user      4831 Mar 25 01:13 pilotlog.txt
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user   1066345 Mar 25 01:13 log.49178177._000113.job.log.1
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user       357 Mar 25 01:13 output.list
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user       620 Mar 25 01:13 runtime_log
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user   1443840 Mar 25 01:13 result.tar.gz
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user      9219 Mar 25 01:13 runtime_log.err
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user       644 Mar 25 01:13 N2IKDmInNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1LuLDmOW4Lbm.diag
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user     21530 Mar 25 01:13 stderr.txt
[2026-03-25 01:13:41] HITS file was successfully produced:
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user 208430100 Mar 25 01:12 shared/HITS.pool.root.1
[2026-03-25 01:13:41]  *** Contents of shared directory: ***
[2026-03-25 01:13:41] total 427716
[2026-03-25 01:13:41] -rw-r--r-- 2 mf493845 unix-user 227484464 Mar 24 23:09 ATLAS.root_0
[2026-03-25 01:13:41] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:09 start_atlas.sh
[2026-03-25 01:13:41] -rw-r--r-- 2 mf493845 unix-user    597562 Mar 24 23:09 input.tar.gz
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user 208430100 Mar 25 01:12 HITS.pool.root.1
[2026-03-25 01:13:41] -rw------- 1 mf493845 unix-user   1443840 Mar 25 01:13 result.tar.gz
01:13:42 (13174): run_atlas exited; CPU time 55956.064139
01:13:42 (13174): called boinc_finish(0)

</stderr_txt>
]]>

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