Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:55:26 (8136): wrapper (7.7.26015): starting
22:55:26 (8136): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 22:55:26] Arguments: --nthreads 8
[2026-03-24 22:55:26] Threads: 8
[2026-03-24 22:55:26] Checking for CVMFS
[2026-03-24 22:55:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 22:55:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 22:55:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 22:55:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 22:55:26] 2.11.0.0 5771 29335 64228 157658 2 188 4000327 4096000 4675 130560 0 3742485 99.799 1591623 268 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 22:55:26] CVMFS is ok
[2026-03-24 22:55:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 22:55:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 22:55:26] Further information can be found at the LHC@home message board.
[2026-03-24 22:55:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 22:55:26] Checking for apptainer binary...
[2026-03-24 22:55:26] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 22:55:26] apptainer is not installed, using version from CVMFS
[2026-03-24 22:55:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 22:55:26] WARNING: Environment variable TMPDIR already has value [/tmp/job_11388262/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node201
[2026-03-24 22:55:26] apptainer works
[2026-03-24 22:55:26] Set ATHENA_PROC_NUMBER=8
[2026-03-24 22:55:26] Set ATHENA_CORE_NUMBER=8
[2026-03-24 22:55:26] Starting ATLAS job with PandaID=7056960791
[2026-03-24 22:55:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11388262/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 00:40:50]  *** The last 200 lines of the pilot log: ***
[2026-03-25 00:40:50] 2026-03-24 23:39:46,278 | INFO     | total number of processed events: 400 (read)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,308 | INFO     | using path: /tmp/job_11388262/atlas/pilot/slots/0/PanDA_Pilot-7056960791/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,308 | INFO     | extracted standard info from prmon json
[2026-03-25 00:40:50] 2026-03-24 23:39:46,308 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 00:40:50] 2026-03-24 23:39:46,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 00:40:50] 2026-03-24 23:39:46,308 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 00:40:50] 2026-03-24 23:39:46,308 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 00:40:50] 2026-03-24 23:39:46,309 | INFO     | fitting pss+swap vs Time
[2026-03-25 00:40:50] 2026-03-24 23:39:46,309 | INFO     | sum of square deviations: 338804492.0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | sum of deviations: 4981694015.000001
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | mean x: 1774392461.0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | mean y: 2477814.0485436893
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | intersect: -26087732061.990593
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | chi2: 1.8181879997356094
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | sum of square deviations: 291817564.5
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | sum of deviations: 10798772019.499996
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | mean x: 1774392308.5
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | mean y: 2495870.43877551
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | intersect: -65659274850.85653
[2026-03-25 00:40:50] 2026-03-24 23:39:46,310 | INFO     | chi2: 1.1381447007551717
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | current chi2=1.1381447007551717 (change=37.402254281698355 %)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | sum of square deviations: 249388862.0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | sum of deviations: 10063587667.000002
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | mean x: 1774392156.0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | mean y: 2493228.129032258
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | intersect: -71599545749.6307
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | chi2: 1.1404996827680156
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | current chi2=1.1404996827680156 (change=-0.2069141130544597 %)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | right removable region: 92
[2026-03-25 00:40:50] 2026-03-24 23:39:46,311 | INFO     | sum of square deviations: 291817564.5
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | sum of deviations: -6004494313.0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | mean x: 1774392613.5
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | mean y: 2512373.5714285714
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | intersect: 36512755939.770325
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | chi2: 0.7111984821917403
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | current chi2=0.7111984821917403 (change=60.88421646743028 %)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | sum of square deviations: 249388862.0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | sum of deviations: -5685795909.0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | mean x: 1774392766.0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | mean y: 2511212.139784946
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | intersect: 40456744207.84589
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | chi2: 0.7121154325924349
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | current chi2=0.7121154325924349 (change=-0.12893030900021024 %)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | left removable region: 20
[2026-03-25 00:40:50] 2026-03-24 23:39:46,312 | INFO     | sum of square deviations: 115715658.0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | sum of deviations: 585179862.4999998
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | mean x: 1774392735.5
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | mean y: 2528625.7083333335
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | intersect: -8970664068.584503
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | chi2: 0.00014279422823305443
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | current memory leak: 5.06 B/s (using 72 data points, chi2=0.00)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | could have reported an average CPU frequency of 2614 MHz (7 samples)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | ..............................
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | . Timing measurements:
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | . get job = 0 s
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | . initial setup = 2 s
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | . payload setup = 3 s
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | . stage-in = 0 s
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | . payload execution = 6230 s
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | . stage-out = 0 s
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | . log creation = 0 s
[2026-03-25 00:40:50] 2026-03-24 23:39:46,313 | INFO     | ..............................
[2026-03-25 00:40:50] 2026-03-24 23:39:46,360 | INFO     | 
[2026-03-25 00:40:50] 2026-03-24 23:39:46,360 | INFO     | job summary report
[2026-03-25 00:40:50] 2026-03-24 23:39:46,360 | INFO     | --------------------------------------------------
[2026-03-25 00:40:50] 2026-03-24 23:39:46,360 | INFO     | PanDA job id: 7056960791
[2026-03-25 00:40:50] 2026-03-24 23:39:46,360 | INFO     | task id: 49180110
[2026-03-25 00:40:50] 2026-03-24 23:39:46,360 | INFO     | errors: (none)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,360 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 00:40:50] 2026-03-24 23:39:46,360 | INFO     | pilot state: finished 
[2026-03-25 00:40:50] 2026-03-24 23:39:46,360 | INFO     | transexitcode: 0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | exeerrorcode: 0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | exeerrordiag: 
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | exitcode: 0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | exitmsg: OK
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | cpuconsumptiontime: 46374 s
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | nevents: 400
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | neventsw: 0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | pid: 28645
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | pgrp: 28645
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | corecount: 8
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | event service: False
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | sizes: {0: 2280113, 1: 2280403, 11: 2280403, 6237: 2307537, 6238: 2307536, 6239: 2316804, 6242: 2316942}
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | --------------------------------------------------
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | 
[2026-03-25 00:40:50] 2026-03-24 23:39:46,361 | INFO     | executing command: ls -lF /tmp/job_11388262/atlas/pilot/slots/0
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,372 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,372 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 00:40:50] 2026-03-24 23:39:46,372 | INFO     | job 7056960791 has completed (purged errors)
[2026-03-25 00:40:50] 2026-03-24 23:39:46,372 | INFO     | overall cleanup function is called
[2026-03-25 00:40:50] 2026-03-24 23:39:47,375 | INFO     | --- collectZombieJob: --- 10, [28645]
[2026-03-25 00:40:50] 2026-03-24 23:39:47,375 | INFO     | zombie collector waiting for pid 28645
[2026-03-25 00:40:50] 2026-03-24 23:39:47,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 00:40:50] 2026-03-24 23:39:47,376 | INFO     | collected zombie processes
[2026-03-25 00:40:50] 2026-03-24 23:39:47,376 | INFO     | will attempt to kill all subprocesses of pid=28645
[2026-03-25 00:40:50] 2026-03-24 23:39:47,476 | INFO     | process IDs to be killed: [28645] (in reverse order)
[2026-03-25 00:40:50] 2026-03-24 23:39:47,514 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 00:40:50] 2026-03-24 23:39:47,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 00:40:50] 2026-03-24 23:39:47,518 | INFO     | did not find any defunct processes belonging to 28645
[2026-03-25 00:40:50] 2026-03-24 23:39:47,521 | INFO     | did not find any defunct processes belonging to 28645
[2026-03-25 00:40:50] 2026-03-24 23:39:47,521 | INFO     | ready for new job
[2026-03-25 00:40:50] 2026-03-24 23:39:47,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 00:40:50] 2026-03-24 23:39:47,521 | INFO     | **************************************
[2026-03-25 00:40:50] 2026-03-24 23:39:47,522 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 00:40:50] 2026-03-24 23:39:47,522 | INFO     | **************************************
[2026-03-25 00:40:50] 2026-03-24 23:39:47,522 | INFO     | 
[2026-03-25 00:40:50] 2026-03-24 23:39:47,536 | INFO     | architecture information:
[2026-03-25 00:40:50] 2026-03-24 23:39:47,536 | INFO     | executing command: cat /etc/os-release
[2026-03-25 00:40:50] 2026-03-24 23:39:47,542 | INFO     | cat /etc/os-release:
[2026-03-25 00:40:50] NAME="CentOS Linux"
[2026-03-25 00:40:50] VERSION="7 (Core)"
[2026-03-25 00:40:50] ID="centos"
[2026-03-25 00:40:50] ID_LIKE="rhel fedora"
[2026-03-25 00:40:50] VERSION_ID="7"
[2026-03-25 00:40:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 00:40:50] ANSI_COLOR="0;31"
[2026-03-25 00:40:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 00:40:50] HOME_URL="https://www.centos.org/"
[2026-03-25 00:40:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 00:40:50] 
[2026-03-25 00:40:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 00:40:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 00:40:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 00:40:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 00:40:50] 
[2026-03-25 00:40:50] 2026-03-24 23:39:47,542 | INFO     | **************************************
[2026-03-25 00:40:50] 2026-03-24 23:39:48,045 | INFO     | executing command: df -mP /tmp/job_11388262/atlas/pilot/slots/0
[2026-03-25 00:40:50] 2026-03-24 23:39:48,051 | INFO     | sufficient remaining disk space (223796527104 B)
[2026-03-25 00:40:50] 2026-03-24 23:39:48,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 00:40:50] 2026-03-24 23:39:48,051 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 00:40:50] 2026-03-24 23:39:48,051 | INFO     | update_server=False
[2026-03-25 00:40:50] 2026-03-24 23:39:48,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 00:40:50] 2026-03-24 23:39:48,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 00:40:50] 2026-03-24 23:39:48,514 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 00:40:50] 2026-03-24 23:39:48,514 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 00:40:50] 2026-03-24 23:39:48,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 00:40:50] 2026-03-24 23:39:48,514 | INFO     | will abort loop
[2026-03-25 00:40:50] 2026-03-24 23:39:48,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 00:40:50] 2026-03-24 23:39:48,982 | INFO     | all data control threads have been joined
[2026-03-25 00:40:50] 2026-03-24 23:39:49,047 | INFO     | all job control threads have been joined
[2026-03-25 00:40:50] 2026-03-24 23:39:49,057 | INFO     | [job] retrieve thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:49,057 | INFO     | [job] queue monitor thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:49,075 | INFO     | all payload control threads have been joined
[2026-03-25 00:40:50] 2026-03-24 23:39:49,078 | INFO     | [payload] validate_post thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:49,084 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:49,095 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:49,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 00:40:50] 2026-03-24 23:39:49,519 | INFO     | [job] job monitor thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:49,553 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:49,588 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:49,653 | INFO     | [data] copytool_in thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:49,987 | INFO     | [data] control thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:50,052 | INFO     | [job] control thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:50,080 | INFO     | [payload] control thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:50,416 | INFO     | [payload] failed_post thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:50,548 | INFO     | [job] validate thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:50,745 | INFO     | [data] copytool_out thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:39:53,288 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 00:40:50] 2026-03-24 23:40:17,564 | INFO     | PID=14727 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 00:40:50] 2026-03-24 23:40:17,564 | INFO     | .. there are 5 such processes running
[2026-03-25 00:40:50] 2026-03-24 23:40:17,565 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 00:40:50] 2026-03-24 23:40:17,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 00:40:50] 2026-03-24 23:40:17,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 00:40:50] 2026-03-24 23:40:31,031 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-25 00:40:50] 2026-03-24 23:40:43,110 | INFO     | [monitor] cgroup control has ended
[2026-03-25 00:40:50] 2026-03-24 23:40:44,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058988288)>']
[2026-03-25 00:40:50] 2026-03-24 23:40:45,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 00:40:50] 2026-03-24 23:40:45,700 | INFO     | [monitor] control thread has ended
[2026-03-25 00:40:50] 2026-03-24 23:40:49,962 | INFO     | all workflow threads have been joined
[2026-03-25 00:40:50] 2026-03-24 23:40:49,962 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 00:40:50] 2026-03-24 23:40:49,962 | INFO     | traces error code: 0
[2026-03-25 00:40:50] 2026-03-24 23:40:49,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 00:40:50] 2026-03-24 23:40:50,013 [wrapper] ==== pilot stdout END ====
[2026-03-25 00:40:50] 2026-03-24 23:40:50,015 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 00:40:50] 2026-03-24 23:40:50,016 [wrapper] pilotpid: 14727
[2026-03-25 00:40:50] 2026-03-24 23:40:50,017 [wrapper] Pilot exit status: 0
[2026-03-25 00:40:50] 2026-03-24 23:40:50,021 [wrapper] pandaids: 7056960791
[2026-03-25 00:40:50] 2026-03-24 23:40:50,043 [wrapper] cleanup supervisor_pilot 28763 14728
[2026-03-25 00:40:50] 2026-03-24 23:40:50,044 [wrapper] Test setup, not cleaning
[2026-03-25 00:40:50] 2026-03-24 23:40:50,045 [wrapper] apfmon messages muted
[2026-03-25 00:40:50] 2026-03-24 23:40:50,046 [wrapper] ==== wrapper stdout END ====
[2026-03-25 00:40:50] 2026-03-24 23:40:50,048 [wrapper] ==== wrapper stderr END ====
[2026-03-25 00:40:50]  *** Error codes and diagnostics ***
[2026-03-25 00:40:50]     "exeErrorCode": 0,
[2026-03-25 00:40:50]     "exeErrorDiag": "",
[2026-03-25 00:40:50]     "pilotErrorCode": 0,
[2026-03-25 00:40:50]     "pilotErrorDiag": "",
[2026-03-25 00:40:50]  *** Listing of results directory ***
[2026-03-25 00:40:50] total 480040
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-25 00:40:50] -rwx------ 1 mf493845 unix-user     36322 Mar 16 16:25 runpilot2-wrapper.sh
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user      5111 Mar 16 16:26 queuedata.json
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user       100 Mar 24 21:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 00:40:50] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 21:53 run_atlas
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user       105 Mar 24 21:53 job.xml
[2026-03-25 00:40:50] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 22:55 shared
[2026-03-25 00:40:50] -rw-r--r-- 2 mf493845 unix-user    597519 Mar 24 22:55 input.tar.gz
[2026-03-25 00:40:50] -rw-r--r-- 2 mf493845 unix-user 245046936 Mar 24 22:55 EVNT.49132718._000001.pool.root.1
[2026-03-25 00:40:50] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 22:55 start_atlas.sh
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user      6391 Mar 24 22:55 init_data.xml
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user         0 Mar 24 22:55 boinc_setup_complete
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user      8192 Mar 24 22:55 boinc_mmap_file
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user         0 Mar 24 22:55 boinc_lockfile
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user      2579 Mar 24 22:55 pandaJob.out
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user   1010852 Mar 24 22:55 agis_schedconf.cvmfs.json
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user   1511579 Mar 24 22:55 agis_ddmendpoints.agis.ALL.json
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user       420 Mar 24 22:55 workernode_map.json
[2026-03-25 00:40:50] drwx------ 5 mf493845 unix-user       440 Mar 24 22:55 pilot3
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user 240079357 Mar 25 00:39 HITS.49180110._000001.pool.root.1
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user      1015 Mar 25 00:39 memory_monitor_summary.json
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user    331231 Mar 25 00:39 log.49180110._000001.job.log.tgz.1
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user      6287 Mar 25 00:39 heartbeat.json
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user        95 Mar 25 00:40 pilot_heartbeat.json
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user      5017 Mar 25 00:40 pilotlog.txt
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user    929090 Mar 25 00:40 log.49180110._000001.job.log.1
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user       357 Mar 25 00:40 output.list
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user       620 Mar 25 00:40 runtime_log
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user   1280000 Mar 25 00:40 result.tar.gz
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user      9219 Mar 25 00:40 runtime_log.err
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user       644 Mar 25 00:40 lTQLDmlzOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmI1xLDmY9ouZn.diag
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user     21497 Mar 25 00:40 stderr.txt
[2026-03-25 00:40:50] HITS file was successfully produced:
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user 240079357 Mar 25 00:39 shared/HITS.pool.root.1
[2026-03-25 00:40:50]  *** Contents of shared directory: ***
[2026-03-25 00:40:50] total 475612
[2026-03-25 00:40:50] -rw-r--r-- 2 mf493845 unix-user    597519 Mar 24 22:55 input.tar.gz
[2026-03-25 00:40:50] -rw-r--r-- 2 mf493845 unix-user 245046936 Mar 24 22:55 ATLAS.root_0
[2026-03-25 00:40:50] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 22:55 start_atlas.sh
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user 240079357 Mar 25 00:39 HITS.pool.root.1
[2026-03-25 00:40:50] -rw------- 1 mf493845 unix-user   1280000 Mar 25 00:40 result.tar.gz
00:40:51 (8136): run_atlas exited; CPU time 46475.394429
00:40:51 (8136): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN