Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:19:36 (23282): wrapper (7.7.26015): starting
23:19:36 (23282): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 23:19:36] Arguments: --nthreads 8
[2026-03-24 23:19:36] Threads: 8
[2026-03-24 23:19:36] Checking for CVMFS
[2026-03-24 23:19:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 23:19:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 23:19:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 23:19:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 23:19:39] 2.11.0.0 6016 29336 80768 157660 3 188 4090444 4096001 2707 130560 1 6844740 99.889 1594934 265 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 23:19:39] CVMFS is ok
[2026-03-24 23:19:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 23:19:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 23:19:39] Further information can be found at the LHC@home message board.
[2026-03-24 23:19:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 23:19:39] Checking for apptainer binary...
[2026-03-24 23:19:39] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 23:19:39] apptainer is not installed, using version from CVMFS
[2026-03-24 23:19:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 23:19:39] WARNING: Environment variable TMPDIR already has value [/tmp/job_11388534/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node027
[2026-03-24 23:19:39] apptainer works
[2026-03-24 23:19:39] Set ATHENA_PROC_NUMBER=8
[2026-03-24 23:19:39] Set ATHENA_CORE_NUMBER=8
[2026-03-24 23:19:39] Starting ATLAS job with PandaID=7056945326
[2026-03-24 23:19:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11388534/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 01:23:03]  *** The last 200 lines of the pilot log: ***
[2026-03-25 01:23:03] 2026-03-25 00:22:30,011 | INFO     | log transfer has been attempted: DONE
[2026-03-25 01:23:03] 2026-03-25 00:22:30,011 | INFO     | job 7056945326 has finished - writing final server update
[2026-03-25 01:23:03] 2026-03-25 00:22:30,011 | INFO     | total number of processed events: 400 (read)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,029 | INFO     | using path: /tmp/job_11388534/atlas/pilot/slots/0/PanDA_Pilot-7056945326/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,029 | INFO     | extracted standard info from prmon json
[2026-03-25 01:23:03] 2026-03-25 00:22:30,029 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 01:23:03] 2026-03-25 00:22:30,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 01:23:03] 2026-03-25 00:22:30,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 01:23:03] 2026-03-25 00:22:30,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 01:23:03] 2026-03-25 00:22:30,031 | INFO     | fitting pss+swap vs Time
[2026-03-25 01:23:03] 2026-03-25 00:22:30,031 | INFO     | sum of square deviations: 549294020.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,031 | INFO     | sum of deviations: 5435269396.999997
[2026-03-25 01:23:03] 2026-03-25 00:22:30,031 | INFO     | mean x: 1774394463.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,031 | INFO     | mean y: 2497328.1818181816
[2026-03-25 01:23:03] 2026-03-25 00:22:30,031 | INFO     | intersect: -17555152258.009094
[2026-03-25 01:23:03] 2026-03-25 00:22:30,031 | INFO     | chi2: 1.9841739034012433
[2026-03-25 01:23:03] 2026-03-25 00:22:30,031 | INFO     | sum of square deviations: 483971865.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | sum of deviations: 13073461440.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | mean x: 1774394310.5
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | mean y: 2514504.603448276
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | intersect: -47928940349.03177
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | chi2: 1.163155576996433
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | current chi2=1.163155576996433 (change=41.378345164072165 %)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | sum of square deviations: 424045160.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | sum of deviations: 12163324848.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | mean x: 1774394158.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | mean y: 2512187.225225225
[2026-03-25 01:23:03] 2026-03-25 00:22:30,032 | INFO     | intersect: -50894266241.15594
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | chi2: 1.1648367089839509
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | current chi2=1.1648367089839509 (change=-0.14453199733254626 %)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | right removable region: 110
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | sum of square deviations: 483971865.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | sum of deviations: -9047845435.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | mean x: 1774394615.5
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | mean y: 2530422.827586207
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | intersect: 33174806298.286285
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | chi2: 0.8575040505783215
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | current chi2=0.8575040505783215 (change=56.78281782113957 %)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,033 | INFO     | sum of square deviations: 424045160.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | sum of deviations: -9240585793.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | mean x: 1774394768.0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | mean y: 2530894.027027027
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | intersect: 38669278285.63581
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | chi2: 0.8569820438983647
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | current chi2=0.8569820438983647 (change=0.060875127015979386 %)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | left removable region: 20
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | sum of square deviations: 226022842.5
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | sum of deviations: -1403915945.5000002
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | mean x: 1774394737.5
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | mean y: 2548467.9444444445
[2026-03-25 01:23:03] 2026-03-25 00:22:30,034 | INFO     | intersect: 11024005582.78246
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | chi2: 0.004032256270777705
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | current memory leak: -6.21 B/s (using 90 data points, chi2=0.00)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | could have reported an average CPU frequency of 2630 MHz (8 samples)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | ..............................
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | . Timing measurements:
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | . get job = 0 s
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | . initial setup = 2 s
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | . payload setup = 3 s
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | . stage-in = 0 s
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | . payload execution = 7342 s
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | . stage-out = 0 s
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | . log creation = 0 s
[2026-03-25 01:23:03] 2026-03-25 00:22:30,035 | INFO     | ..............................
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | 
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | job summary report
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | --------------------------------------------------
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | PanDA job id: 7056945326
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | task id: 49178919
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | errors: (none)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | pilot state: finished 
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | transexitcode: 0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | exeerrorcode: 0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | exeerrordiag: 
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | exitcode: 0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | exitmsg: OK
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | cpuconsumptiontime: 54292 s
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | nevents: 400
[2026-03-25 01:23:03] 2026-03-25 00:22:30,083 | INFO     | neventsw: 0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,084 | INFO     | pid: 1739
[2026-03-25 01:23:03] 2026-03-25 00:22:30,084 | INFO     | pgrp: 1739
[2026-03-25 01:23:03] 2026-03-25 00:22:30,084 | INFO     | corecount: 8
[2026-03-25 01:23:03] 2026-03-25 00:22:30,084 | INFO     | event service: False
[2026-03-25 01:23:03] 2026-03-25 00:22:30,084 | INFO     | sizes: {0: 2280177, 1: 2280467, 11: 2280467, 7349: 2308006, 7350: 2317034, 7352: 2317090, 7353: 2317412}
[2026-03-25 01:23:03] 2026-03-25 00:22:30,084 | INFO     | --------------------------------------------------
[2026-03-25 01:23:03] 2026-03-25 00:22:30,084 | INFO     | 
[2026-03-25 01:23:03] 2026-03-25 00:22:30,084 | INFO     | executing command: ls -lF /tmp/job_11388534/atlas/pilot/slots/0
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,094 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 01:23:03] 2026-03-25 00:22:30,094 | INFO     | job 7056945326 has completed (purged errors)
[2026-03-25 01:23:03] 2026-03-25 00:22:30,094 | INFO     | overall cleanup function is called
[2026-03-25 01:23:03] 2026-03-25 00:22:31,099 | INFO     | --- collectZombieJob: --- 10, [1739]
[2026-03-25 01:23:03] 2026-03-25 00:22:31,100 | INFO     | zombie collector waiting for pid 1739
[2026-03-25 01:23:03] 2026-03-25 00:22:31,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 01:23:03] 2026-03-25 00:22:31,100 | INFO     | collected zombie processes
[2026-03-25 01:23:03] 2026-03-25 00:22:31,100 | INFO     | will attempt to kill all subprocesses of pid=1739
[2026-03-25 01:23:03] 2026-03-25 00:22:31,189 | INFO     | process IDs to be killed: [1739] (in reverse order)
[2026-03-25 01:23:03] 2026-03-25 00:22:31,219 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 01:23:03] 2026-03-25 00:22:31,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 01:23:03] 2026-03-25 00:22:31,223 | INFO     | did not find any defunct processes belonging to 1739
[2026-03-25 01:23:03] 2026-03-25 00:22:31,226 | INFO     | did not find any defunct processes belonging to 1739
[2026-03-25 01:23:03] 2026-03-25 00:22:31,226 | INFO     | ready for new job
[2026-03-25 01:23:03] 2026-03-25 00:22:31,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 01:23:03] 2026-03-25 00:22:31,227 | INFO     | **************************************
[2026-03-25 01:23:03] 2026-03-25 00:22:31,227 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 01:23:03] 2026-03-25 00:22:31,227 | INFO     | **************************************
[2026-03-25 01:23:03] 2026-03-25 00:22:31,227 | INFO     | 
[2026-03-25 01:23:03] 2026-03-25 00:22:31,240 | INFO     | architecture information:
[2026-03-25 01:23:03] 2026-03-25 00:22:31,240 | INFO     | executing command: cat /etc/os-release
[2026-03-25 01:23:03] 2026-03-25 00:22:31,246 | INFO     | cat /etc/os-release:
[2026-03-25 01:23:03] NAME="CentOS Linux"
[2026-03-25 01:23:03] VERSION="7 (Core)"
[2026-03-25 01:23:03] ID="centos"
[2026-03-25 01:23:03] ID_LIKE="rhel fedora"
[2026-03-25 01:23:03] VERSION_ID="7"
[2026-03-25 01:23:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 01:23:03] ANSI_COLOR="0;31"
[2026-03-25 01:23:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 01:23:03] HOME_URL="https://www.centos.org/"
[2026-03-25 01:23:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 01:23:03] 
[2026-03-25 01:23:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 01:23:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 01:23:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 01:23:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 01:23:03] 
[2026-03-25 01:23:03] 2026-03-25 00:22:31,246 | INFO     | **************************************
[2026-03-25 01:23:03] 2026-03-25 00:22:31,749 | INFO     | executing command: df -mP /tmp/job_11388534/atlas/pilot/slots/0
[2026-03-25 01:23:03] 2026-03-25 00:22:31,755 | INFO     | sufficient remaining disk space (228193206272 B)
[2026-03-25 01:23:03] 2026-03-25 00:22:31,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 01:23:03] 2026-03-25 00:22:31,755 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 01:23:03] 2026-03-25 00:22:31,755 | INFO     | update_server=False
[2026-03-25 01:23:03] 2026-03-25 00:22:31,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 01:23:03] 2026-03-25 00:22:31,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 01:23:03] 2026-03-25 00:22:31,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:23:03] 2026-03-25 00:22:32,043 | INFO     | all data control threads have been joined
[2026-03-25 01:23:03] 2026-03-25 00:22:32,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 01:23:03] 2026-03-25 00:22:32,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:23:03] 2026-03-25 00:22:32,481 | INFO     | aborting loop
[2026-03-25 01:23:03] 2026-03-25 00:22:32,756 | INFO     | [job] queue monitor thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:32,760 | INFO     | [job] retrieve thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:32,837 | INFO     | [payload] failed_post thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:32,973 | INFO     | all payload control threads have been joined
[2026-03-25 01:23:03] 2026-03-25 00:22:32,988 | INFO     | [data] copytool_in thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:33,048 | INFO     | [data] control thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:33,305 | INFO     | all job control threads have been joined
[2026-03-25 01:23:03] 2026-03-25 00:22:33,475 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:33,486 | INFO     | [job] job monitor thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:33,788 | INFO     | [job] validate thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:33,921 | INFO     | [payload] validate_post thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:33,973 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:33,978 | INFO     | [payload] control thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:34,189 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:34,311 | INFO     | [job] control thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:34,475 | INFO     | [data] copytool_out thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:35,760 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:42,595 | INFO     | job.realtimelogging is not enabled
[2026-03-25 01:23:03] 2026-03-25 00:22:43,600 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 01:23:03] 2026-03-25 00:22:57,842 | INFO     | [monitor] cgroup control has ended
[2026-03-25 01:23:03] 2026-03-25 00:22:58,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-25 01:23:03] 2026-03-25 00:23:01,816 | INFO     | PID=28028 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 01:23:03] 2026-03-25 00:23:01,816 | INFO     | .. there are 2 such processes running
[2026-03-25 01:23:03] 2026-03-25 00:23:01,816 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 01:23:03] 2026-03-25 00:23:01,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 01:23:03] 2026-03-25 00:23:01,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 01:23:03] 2026-03-25 00:23:01,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 01:23:03] 2026-03-25 00:23:01,816 | INFO     | [monitor] control thread has ended
[2026-03-25 01:23:03] 2026-03-25 00:23:03,115 | INFO     | all workflow threads have been joined
[2026-03-25 01:23:03] 2026-03-25 00:23:03,115 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 01:23:03] 2026-03-25 00:23:03,115 | INFO     | traces error code: 0
[2026-03-25 01:23:03] 2026-03-25 00:23:03,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 01:23:03] 2026-03-25 00:23:03,165 [wrapper] ==== pilot stdout END ====
[2026-03-25 01:23:03] 2026-03-25 00:23:03,167 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 01:23:03] 2026-03-25 00:23:03,168 [wrapper] pilotpid: 28028
[2026-03-25 01:23:03] 2026-03-25 00:23:03,169 [wrapper] Pilot exit status: 0
[2026-03-25 01:23:03] 2026-03-25 00:23:03,173 [wrapper] pandaids: 7056945326
[2026-03-25 01:23:03] 2026-03-25 00:23:03,194 [wrapper] cleanup supervisor_pilot  4514 28029
[2026-03-25 01:23:03] 2026-03-25 00:23:03,195 [wrapper] Test setup, not cleaning
[2026-03-25 01:23:03] 2026-03-25 00:23:03,196 [wrapper] apfmon messages muted
[2026-03-25 01:23:03] 2026-03-25 00:23:03,197 [wrapper] ==== wrapper stdout END ====
[2026-03-25 01:23:03] 2026-03-25 00:23:03,198 [wrapper] ==== wrapper stderr END ====
[2026-03-25 01:23:03]  *** Error codes and diagnostics ***
[2026-03-25 01:23:03]     "exeErrorCode": 0,
[2026-03-25 01:23:03]     "exeErrorDiag": "",
[2026-03-25 01:23:03]     "pilotErrorCode": 0,
[2026-03-25 01:23:03]     "pilotErrorDiag": "",
[2026-03-25 01:23:03]  *** Listing of results directory ***
[2026-03-25 01:23:03] total 475172
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user      5111 Mar 16 16:04 queuedata.json
[2026-03-25 01:23:03] -rwx------ 1 mf493845 unix-user     36322 Mar 16 16:04 runpilot2-wrapper.sh
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user       100 Mar 24 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 01:23:03] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 22:19 run_atlas
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user       105 Mar 24 22:19 job.xml
[2026-03-25 01:23:03] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:19 start_atlas.sh
[2026-03-25 01:23:03] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 23:19 shared
[2026-03-25 01:23:03] -rw-r--r-- 2 mf493845 unix-user    597539 Mar 24 23:19 input.tar.gz
[2026-03-25 01:23:03] -rw-r--r-- 2 mf493845 unix-user 236356907 Mar 24 23:19 EVNT.49130085._000003.pool.root.1
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user         0 Mar 24 23:19 boinc_setup_complete
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user      6390 Mar 24 23:19 init_data.xml
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user      8192 Mar 24 23:19 boinc_mmap_file
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user         0 Mar 24 23:19 boinc_lockfile
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user      2622 Mar 24 23:19 pandaJob.out
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user   1010852 Mar 24 23:19 agis_schedconf.cvmfs.json
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user   1511579 Mar 24 23:19 agis_ddmendpoints.agis.ALL.json
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user       420 Mar 24 23:19 workernode_map.json
[2026-03-25 01:23:03] drwx------ 5 mf493845 unix-user       440 Mar 24 23:19 pilot3
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user 243431177 Mar 25 01:22 HITS.49178919._000054.pool.root.1
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user      1020 Mar 25 01:22 memory_monitor_summary.json
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user    353818 Mar 25 01:22 log.49178919._000054.job.log.tgz.1
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user        95 Mar 25 01:22 pilot_heartbeat.json
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user      6300 Mar 25 01:22 heartbeat.json
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user      4903 Mar 25 01:23 pilotlog.txt
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user   1083562 Mar 25 01:23 log.49178919._000054.job.log.1
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user       357 Mar 25 01:23 output.list
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user       620 Mar 25 01:23 runtime_log
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user   1454080 Mar 25 01:23 result.tar.gz
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user       645 Mar 25 01:23 VsuKDm4fOM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmTuLDmQm1IJo.diag
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user      9219 Mar 25 01:23 runtime_log.err
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user     21460 Mar 25 01:23 stderr.txt
[2026-03-25 01:23:03] HITS file was successfully produced:
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user 243431177 Mar 25 01:22 shared/HITS.pool.root.1
[2026-03-25 01:23:03]  *** Contents of shared directory: ***
[2026-03-25 01:23:03] total 470568
[2026-03-25 01:23:03] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:19 start_atlas.sh
[2026-03-25 01:23:03] -rw-r--r-- 2 mf493845 unix-user    597539 Mar 24 23:19 input.tar.gz
[2026-03-25 01:23:03] -rw-r--r-- 2 mf493845 unix-user 236356907 Mar 24 23:19 ATLAS.root_0
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user 243431177 Mar 25 01:22 HITS.pool.root.1
[2026-03-25 01:23:03] -rw------- 1 mf493845 unix-user   1454080 Mar 25 01:23 result.tar.gz
01:23:05 (23282): run_atlas exited; CPU time 54407.564332
01:23:05 (23282): called boinc_finish(0)

</stderr_txt>
]]>

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