Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:56:42 (1924): wrapper (7.7.26015): starting
22:56:42 (1924): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 22:56:42] Arguments: --nthreads 8
[2026-03-24 22:56:42] Threads: 8
[2026-03-24 22:56:42] Checking for CVMFS
[2026-03-24 22:56:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 22:56:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 22:56:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 22:56:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 22:56:42] 2.11.0.0 5850 29491 72420 157658 1 188 2197453 4096001 2751 130560 9 5402190 99.860 1616612 240 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 22:56:42] CVMFS is ok
[2026-03-24 22:56:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 22:56:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 22:56:42] Further information can be found at the LHC@home message board.
[2026-03-24 22:56:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 22:56:42] Checking for apptainer binary...
[2026-03-24 22:56:42] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 22:56:42] apptainer is not installed, using version from CVMFS
[2026-03-24 22:56:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 22:56:42] WARNING: Environment variable TMPDIR already has value [/tmp/job_11388129/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node050
[2026-03-24 22:56:42] apptainer works
[2026-03-24 22:56:42] Set ATHENA_PROC_NUMBER=8
[2026-03-24 22:56:42] Set ATHENA_CORE_NUMBER=8
[2026-03-24 22:56:42] Starting ATLAS job with PandaID=7056942434
[2026-03-24 22:56:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11388129/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 00:57:28]  *** The last 200 lines of the pilot log: ***
[2026-03-25 00:57:28] 2026-03-24 23:56:55,205 | INFO     | time since job start (7203s) is within the limit (345600.0s)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,923 | INFO     | job 7056942434 has state=finished
[2026-03-25 00:57:28] 2026-03-24 23:56:55,923 | INFO     | preparing for final server update for job 7056942434 in state='finished'
[2026-03-25 00:57:28] 2026-03-24 23:56:55,923 | INFO     | reading metadata from: /tmp/job_11388129/atlas/pilot/slots/0/PanDA_Pilot-7056942434/jobReport.json
[2026-03-25 00:57:28] 2026-03-24 23:56:55,924 | INFO     | added worker_node to metadata from /tmp/job_11388129/atlas/pilot/slots/0/workernode_map.json
[2026-03-25 00:57:28] 2026-03-24 23:56:55,924 | INFO     | this job has now completed (state=finished)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,924 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,924 | INFO     | log transfer has been attempted: DONE
[2026-03-25 00:57:28] 2026-03-24 23:56:55,924 | INFO     | job 7056942434 has finished - writing final server update
[2026-03-25 00:57:28] 2026-03-24 23:56:55,924 | INFO     | total number of processed events: 400 (read)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,942 | INFO     | using path: /tmp/job_11388129/atlas/pilot/slots/0/PanDA_Pilot-7056942434/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,942 | INFO     | extracted standard info from prmon json
[2026-03-25 00:57:28] 2026-03-24 23:56:55,942 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 00:57:28] 2026-03-24 23:56:55,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 00:57:28] 2026-03-24 23:56:55,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 00:57:28] 2026-03-24 23:56:55,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 00:57:28] 2026-03-24 23:56:55,944 | INFO     | fitting pss+swap vs Time
[2026-03-25 00:57:28] 2026-03-24 23:56:55,944 | INFO     | sum of square deviations: 509440249.5
[2026-03-25 00:57:28] 2026-03-24 23:56:55,944 | INFO     | sum of deviations: 15479825429.999998
[2026-03-25 00:57:28] 2026-03-24 23:56:55,944 | INFO     | mean x: 1774392998.5
[2026-03-25 00:57:28] 2026-03-24 23:56:55,944 | INFO     | mean y: 2496289.9322033897
[2026-03-25 00:57:28] 2026-03-24 23:56:55,944 | INFO     | intersect: -53914118834.12318
[2026-03-25 00:57:28] 2026-03-24 23:56:55,944 | INFO     | chi2: 1.1257731492373555
[2026-03-25 00:57:28] 2026-03-24 23:56:55,945 | INFO     | sum of square deviations: 447383272.0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,945 | INFO     | sum of deviations: 14357885919.000002
[2026-03-25 00:57:28] 2026-03-24 23:56:55,945 | INFO     | mean x: 1774392846.0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,945 | INFO     | mean y: 2493531.4424778763
[2026-03-25 00:57:28] 2026-03-24 23:56:55,945 | INFO     | intersect: -56943153864.95311
[2026-03-25 00:57:28] 2026-03-24 23:56:55,945 | INFO     | chi2: 1.127408383102481
[2026-03-25 00:57:28] 2026-03-24 23:56:55,945 | INFO     | current chi2=1.127408383102481 (change=-0.14525429623484218 %)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,945 | INFO     | right removable region: 112
[2026-03-25 00:57:28] 2026-03-24 23:56:55,945 | INFO     | sum of square deviations: 447383272.0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | sum of deviations: 2419476306.0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | mean x: 1774393151.0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | mean y: 2527564.053097345
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | intersect: -9593499947.617434
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | chi2: 0.0024848248917661627
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | current chi2=0.0024848248917661627 (change=99.77927836585467 %)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | sum of square deviations: 390582207.0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | sum of deviations: 2272623411.4999995
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | mean x: 1774393303.5
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | mean y: 2527942.6203703703
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | intersect: -10321874169.078804
[2026-03-25 00:57:28] 2026-03-24 23:56:55,946 | INFO     | chi2: 0.0022539404670901013
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | current chi2=0.0022539404670901013 (change=9.291778484718636 %)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | left removable region: 20
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | sum of square deviations: 241429643.0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | sum of deviations: 1907070175.4999995
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | mean x: 1774393425.5
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | mean y: 2525396.8804347827
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | intersect: -14013536339.88952
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | chi2: 0.00022498574578060134
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | current memory leak: 7.90 B/s (using 92 data points, chi2=0.00)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | could have reported an average CPU frequency of 2786 MHz (7 samples)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | ..............................
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | . Timing measurements:
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | . get job = 0 s
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | . initial setup = 2 s
[2026-03-25 00:57:28] 2026-03-24 23:56:55,947 | INFO     | . payload setup = 3 s
[2026-03-25 00:57:28] 2026-03-24 23:56:55,948 | INFO     | . stage-in = 0 s
[2026-03-25 00:57:28] 2026-03-24 23:56:55,948 | INFO     | . payload execution = 7180 s
[2026-03-25 00:57:28] 2026-03-24 23:56:55,948 | INFO     | . stage-out = 0 s
[2026-03-25 00:57:28] 2026-03-24 23:56:55,948 | INFO     | . log creation = 0 s
[2026-03-25 00:57:28] 2026-03-24 23:56:55,948 | INFO     | ..............................
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | 
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | job summary report
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | --------------------------------------------------
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | PanDA job id: 7056942434
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | task id: 49178731
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | errors: (none)
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | pilot state: finished 
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | transexitcode: 0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | exeerrorcode: 0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | exeerrordiag: 
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | exitcode: 0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | exitmsg: OK
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | cpuconsumptiontime: 53786 s
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | nevents: 400
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | neventsw: 0
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | pid: 24966
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | pgrp: 24966
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | corecount: 8
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | event service: False
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | sizes: {0: 2280421, 11: 2280421, 7188: 2316964, 7190: 2316964, 7192: 2317158}
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | --------------------------------------------------
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | 
[2026-03-25 00:57:28] 2026-03-24 23:56:55,996 | INFO     | executing command: ls -lF /tmp/job_11388129/atlas/pilot/slots/0
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,007 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 00:57:28] 2026-03-24 23:56:56,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,007 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 00:57:28] 2026-03-24 23:56:56,007 | INFO     | job 7056942434 has completed (purged errors)
[2026-03-25 00:57:28] 2026-03-24 23:56:56,007 | INFO     | overall cleanup function is called
[2026-03-25 00:57:28] 2026-03-24 23:56:57,013 | INFO     | --- collectZombieJob: --- 10, [24966]
[2026-03-25 00:57:28] 2026-03-24 23:56:57,013 | INFO     | zombie collector waiting for pid 24966
[2026-03-25 00:57:28] 2026-03-24 23:56:57,013 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 00:57:28] 2026-03-24 23:56:57,013 | INFO     | collected zombie processes
[2026-03-25 00:57:28] 2026-03-24 23:56:57,013 | INFO     | will attempt to kill all subprocesses of pid=24966
[2026-03-25 00:57:28] 2026-03-24 23:56:57,104 | INFO     | process IDs to be killed: [24966] (in reverse order)
[2026-03-25 00:57:28] 2026-03-24 23:56:57,137 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 00:57:28] 2026-03-24 23:56:57,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 00:57:28] 2026-03-24 23:56:57,140 | INFO     | did not find any defunct processes belonging to 24966
[2026-03-25 00:57:28] 2026-03-24 23:56:57,143 | INFO     | did not find any defunct processes belonging to 24966
[2026-03-25 00:57:28] 2026-03-24 23:56:57,143 | INFO     | ready for new job
[2026-03-25 00:57:28] 2026-03-24 23:56:57,143 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 00:57:28] 2026-03-24 23:56:57,144 | INFO     | **************************************
[2026-03-25 00:57:28] 2026-03-24 23:56:57,144 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 00:57:28] 2026-03-24 23:56:57,144 | INFO     | **************************************
[2026-03-25 00:57:28] 2026-03-24 23:56:57,144 | INFO     | 
[2026-03-25 00:57:28] 2026-03-24 23:56:57,159 | INFO     | architecture information:
[2026-03-25 00:57:28] 2026-03-24 23:56:57,159 | INFO     | executing command: cat /etc/os-release
[2026-03-25 00:57:28] 2026-03-24 23:56:57,165 | INFO     | cat /etc/os-release:
[2026-03-25 00:57:28] NAME="CentOS Linux"
[2026-03-25 00:57:28] VERSION="7 (Core)"
[2026-03-25 00:57:28] ID="centos"
[2026-03-25 00:57:28] ID_LIKE="rhel fedora"
[2026-03-25 00:57:28] VERSION_ID="7"
[2026-03-25 00:57:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 00:57:28] ANSI_COLOR="0;31"
[2026-03-25 00:57:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 00:57:28] HOME_URL="https://www.centos.org/"
[2026-03-25 00:57:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 00:57:28] 
[2026-03-25 00:57:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 00:57:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 00:57:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 00:57:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 00:57:28] 
[2026-03-25 00:57:28] 2026-03-24 23:56:57,165 | INFO     | **************************************
[2026-03-25 00:57:28] 2026-03-24 23:56:57,667 | INFO     | executing command: df -mP /tmp/job_11388129/atlas/pilot/slots/0
[2026-03-25 00:57:28] 2026-03-24 23:56:57,673 | INFO     | sufficient remaining disk space (228017045504 B)
[2026-03-25 00:57:28] 2026-03-24 23:56:57,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 00:57:28] 2026-03-24 23:56:57,673 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 00:57:28] 2026-03-24 23:56:57,673 | INFO     | update_server=False
[2026-03-25 00:57:28] 2026-03-24 23:56:57,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 00:57:28] 2026-03-24 23:56:57,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 00:57:28] 2026-03-24 23:56:57,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 00:57:28] 2026-03-24 23:56:57,770 | INFO     | all payload control threads have been joined
[2026-03-25 00:57:28] 2026-03-24 23:56:57,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 00:57:28] 2026-03-24 23:56:57,927 | INFO     | aborting loop
[2026-03-25 00:57:28] 2026-03-24 23:56:58,474 | INFO     | all data control threads have been joined
[2026-03-25 00:57:28] 2026-03-24 23:56:58,679 | INFO     | [job] retrieve thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:58,679 | INFO     | [job] queue monitor thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:58,775 | INFO     | [payload] control thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:58,932 | INFO     | [job] job monitor thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:59,077 | INFO     | [payload] validate_post thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:59,235 | INFO     | [job] validate thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:59,315 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:59,319 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:59,334 | INFO     | all job control threads have been joined
[2026-03-25 00:57:28] 2026-03-24 23:56:59,446 | INFO     | [data] copytool_in thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:59,479 | INFO     | [data] control thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:59,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 00:57:28] 2026-03-24 23:56:59,679 | INFO     | [data] copytool_out thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:56:59,834 | INFO     | [payload] failed_post thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:57:00,097 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:57:00,339 | INFO     | [job] control thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:57:03,634 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:57:04,101 | INFO     | [monitor] cgroup control has ended
[2026-03-25 00:57:28] 2026-03-24 23:57:08,167 | INFO     | job.realtimelogging is not enabled
[2026-03-25 00:57:28] 2026-03-24 23:57:09,172 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 00:57:28] 2026-03-24 23:57:09,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-25 00:57:28] 2026-03-24 23:57:14,290 | INFO     | all workflow threads have been joined
[2026-03-25 00:57:28] 2026-03-24 23:57:14,290 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 00:57:28] 2026-03-24 23:57:14,290 | INFO     | traces error code: 0
[2026-03-25 00:57:28] 2026-03-24 23:57:14,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 00:57:28] 2026-03-24 23:57:28,383 | INFO     | PID=9765 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-25 00:57:28] 2026-03-24 23:57:28,383 | INFO     | .. there are 2 such processes running
[2026-03-25 00:57:28] 2026-03-24 23:57:28,383 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 00:57:28] 2026-03-24 23:57:28,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 00:57:28] 2026-03-24 23:57:28,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 00:57:28] 2026-03-24 23:57:28,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 00:57:28] 2026-03-24 23:57:28,383 | INFO     | [monitor] control thread has ended
[2026-03-25 00:57:28] 2026-03-24 23:57:28,435 [wrapper] ==== pilot stdout END ====
[2026-03-25 00:57:28] 2026-03-24 23:57:28,436 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 00:57:28] 2026-03-24 23:57:28,437 [wrapper] pilotpid: 9765
[2026-03-25 00:57:28] 2026-03-24 23:57:28,438 [wrapper] Pilot exit status: 0
[2026-03-25 00:57:28] 2026-03-24 23:57:28,443 [wrapper] pandaids: 7056942434
[2026-03-25 00:57:28] 2026-03-24 23:57:28,464 [wrapper] cleanup supervisor_pilot  6039 9766
[2026-03-25 00:57:28] 2026-03-24 23:57:28,465 [wrapper] Test setup, not cleaning
[2026-03-25 00:57:28] 2026-03-24 23:57:28,466 [wrapper] apfmon messages muted
[2026-03-25 00:57:28] 2026-03-24 23:57:28,467 [wrapper] ==== wrapper stdout END ====
[2026-03-25 00:57:28] 2026-03-24 23:57:28,468 [wrapper] ==== wrapper stderr END ====
[2026-03-25 00:57:28]  *** Error codes and diagnostics ***
[2026-03-25 00:57:28]     "exeErrorCode": 0,
[2026-03-25 00:57:28]     "exeErrorDiag": "",
[2026-03-25 00:57:28]     "pilotErrorCode": 0,
[2026-03-25 00:57:28]     "pilotErrorDiag": "",
[2026-03-25 00:57:28]  *** Listing of results directory ***
[2026-03-25 00:57:28] total 473096
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user    585013 Mar 16 15:08 pilot3.tar.gz
[2026-03-25 00:57:28] -rwx------ 1 mf493845 unix-user     36322 Mar 16 15:08 runpilot2-wrapper.sh
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user      5111 Mar 16 15:10 queuedata.json
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user       100 Mar 24 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 00:57:28] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 21:54 run_atlas
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user       105 Mar 24 21:54 job.xml
[2026-03-25 00:57:28] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 22:56 start_atlas.sh
[2026-03-25 00:57:28] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 22:56 shared
[2026-03-25 00:57:28] -rw-r--r-- 2 mf493845 unix-user    597537 Mar 24 22:56 input.tar.gz
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user      6389 Mar 24 22:56 init_data.xml
[2026-03-25 00:57:28] -rw-r--r-- 2 mf493845 unix-user 244429010 Mar 24 22:56 EVNT.49129589._000009.pool.root.1
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user         0 Mar 24 22:56 boinc_setup_complete
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user      8192 Mar 24 22:56 boinc_mmap_file
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user         0 Mar 24 22:56 boinc_lockfile
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user      2608 Mar 24 22:56 pandaJob.out
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user   1010852 Mar 24 22:56 agis_schedconf.cvmfs.json
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user   1511579 Mar 24 22:56 agis_ddmendpoints.agis.ALL.json
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user       413 Mar 24 22:56 workernode_map.json
[2026-03-25 00:57:28] drwx------ 5 mf493845 unix-user       440 Mar 24 22:56 pilot3
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user 233281092 Mar 25 00:56 HITS.49178731._000207.pool.root.1
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user        95 Mar 25 00:56 pilot_heartbeat.json
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user      1018 Mar 25 00:56 memory_monitor_summary.json
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user    353399 Mar 25 00:56 log.49178731._000207.job.log.tgz.1
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user      6294 Mar 25 00:56 heartbeat.json
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user       819 Mar 25 00:57 pilotlog.txt
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user   1059308 Mar 25 00:57 log.49178731._000207.job.log.1
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user       357 Mar 25 00:57 output.list
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user       620 Mar 25 00:57 runtime_log
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user   1433600 Mar 25 00:57 result.tar.gz
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user       643 Mar 25 00:57 VhFODmcnNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrcxLDmUjYLzn.diag
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user      9219 Mar 25 00:57 runtime_log.err
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user     21706 Mar 25 00:57 stderr.txt
[2026-03-25 00:57:28] HITS file was successfully produced:
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user 233281092 Mar 25 00:56 shared/HITS.pool.root.1
[2026-03-25 00:57:28]  *** Contents of shared directory: ***
[2026-03-25 00:57:28] total 468520
[2026-03-25 00:57:28] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 22:56 start_atlas.sh
[2026-03-25 00:57:28] -rw-r--r-- 2 mf493845 unix-user    597537 Mar 24 22:56 input.tar.gz
[2026-03-25 00:57:28] -rw-r--r-- 2 mf493845 unix-user 244429010 Mar 24 22:56 ATLAS.root_0
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user 233281092 Mar 25 00:56 HITS.pool.root.1
[2026-03-25 00:57:28] -rw------- 1 mf493845 unix-user   1433600 Mar 25 00:57 result.tar.gz
00:57:30 (1924): run_atlas exited; CPU time 53897.145488
00:57:30 (1924): called boinc_finish(0)

</stderr_txt>
]]>

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