Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:51:18 (729888): wrapper (7.7.26015): starting
12:51:18 (729888): wrapper: running run_atlas (--nthreads 4)
[2026-03-25 12:51:18] Arguments: --nthreads 4
[2026-03-25 12:51:18] Threads: 4
[2026-03-25 12:51:18] Checking for CVMFS
[2026-03-25 12:51:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-25 12:51:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-25 12:51:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-25 12:51:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-25 12:51:18] 2.13.3.0 167085 1544 50260 157690 0 60 3021886 4096000 4798 130560 0 2393420 99.992 66336 4463 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-25 12:51:18] CVMFS is ok
[2026-03-25 12:51:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-25 12:51:18] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-25 12:51:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-25 12:51:18] Further information can be found at the LHC@home message board.
[2026-03-25 12:51:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-25 12:51:18] Checking for apptainer binary...
[2026-03-25 12:51:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-25 12:51:18] Running /usr/bin/apptainer --version
[2026-03-25 12:51:18] apptainer version 1.4.5
[2026-03-25 12:51:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-25 12:51:18] X-32-ubuntu
[2026-03-25 12:51:18] apptainer works
[2026-03-25 12:51:18] Set ATHENA_PROC_NUMBER=4
[2026-03-25 12:51:18] Set ATHENA_CORE_NUMBER=4
[2026-03-25 12:51:18] Starting ATLAS job with PandaID=7056969249
[2026-03-25 12:51:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 17:58:14]  *** The last 200 lines of the pilot log: ***
[2026-03-25 17:58:14] 2026-03-25 21:57:42,056 | INFO     | preparing for final server update for job 7056969249 in state='finished'
[2026-03-25 17:58:14] 2026-03-25 21:57:42,056 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7056969249/jobReport.json
[2026-03-25 17:58:14] 2026-03-25 21:57:42,058 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-03-25 17:58:14] 2026-03-25 21:57:42,058 | INFO     | this job has now completed (state=finished)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,058 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,058 | INFO     | log transfer has been attempted: DONE
[2026-03-25 17:58:14] 2026-03-25 21:57:42,058 | INFO     | job 7056969249 has finished - writing final server update
[2026-03-25 17:58:14] 2026-03-25 21:57:42,058 | INFO     | total number of processed events: 400 (read)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,063 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7056969249/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,063 | INFO     | extracted standard info from prmon json
[2026-03-25 17:58:14] 2026-03-25 21:57:42,063 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 17:58:14] 2026-03-25 21:57:42,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 17:58:14] 2026-03-25 21:57:42,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 17:58:14] 2026-03-25 21:57:42,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 17:58:14] 2026-03-25 21:57:42,067 | INFO     | fitting pss+swap vs Time
[2026-03-25 17:58:14] 2026-03-25 21:57:42,067 | INFO     | sum of square deviations: 8456158550.0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,069 | INFO     | sum of deviations: 25596121733.000004
[2026-03-25 17:58:14] 2026-03-25 21:57:42,069 | INFO     | mean x: 1774466662.0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,069 | INFO     | mean y: 2329612.5747508304
[2026-03-25 17:58:14] 2026-03-25 21:57:42,069 | INFO     | intersect: -5368840336.893873
[2026-03-25 17:58:14] 2026-03-25 21:57:42,069 | INFO     | chi2: 1.1533799628724386
[2026-03-25 17:58:14] 2026-03-25 21:57:42,070 | INFO     | sum of square deviations: 8041713570.0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,071 | INFO     | sum of deviations: 25036822218.5
[2026-03-25 17:58:14] 2026-03-25 21:57:42,071 | INFO     | mean x: 1774466509.5
[2026-03-25 17:58:14] 2026-03-25 21:57:42,072 | INFO     | mean y: 2329406.7871621624
[2026-03-25 17:58:14] 2026-03-25 21:57:42,072 | INFO     | intersect: -5522239721.958087
[2026-03-25 17:58:14] 2026-03-25 21:57:42,072 | INFO     | chi2: 1.153664451546776
[2026-03-25 17:58:14] 2026-03-25 21:57:42,072 | INFO     | current chi2=1.153664451546776 (change=-0.024665650825846253 %)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,072 | INFO     | right removable region: 295
[2026-03-25 17:58:14] 2026-03-25 21:57:42,072 | INFO     | sum of square deviations: 8041713570.0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,074 | INFO     | sum of deviations: -5435843071.5
[2026-03-25 17:58:14] 2026-03-25 21:57:42,074 | INFO     | mean x: 1774466814.5
[2026-03-25 17:58:14] 2026-03-25 21:57:42,074 | INFO     | mean y: 2340916.679054054
[2026-03-25 17:58:14] 2026-03-25 21:57:42,074 | INFO     | intersect: 1201802083.1635623
[2026-03-25 17:58:14] 2026-03-25 21:57:42,074 | INFO     | chi2: 0.03223943628123316
[2026-03-25 17:58:14] 2026-03-25 21:57:42,074 | INFO     | current chi2=0.03223943628123316 (change=97.20478616596195 %)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,075 | INFO     | sum of square deviations: 7641036290.0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,076 | INFO     | sum of deviations: -2332238131.9999986
[2026-03-25 17:58:14] 2026-03-25 21:57:42,076 | INFO     | mean x: 1774466967.0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,077 | INFO     | mean y: 2339733.9140893472
[2026-03-25 17:58:14] 2026-03-25 21:57:42,077 | INFO     | intersect: 543952071.2128804
[2026-03-25 17:58:14] 2026-03-25 21:57:42,077 | INFO     | chi2: 0.028381884233072238
[2026-03-25 17:58:14] 2026-03-25 21:57:42,077 | INFO     | current chi2=0.028381884233072238 (change=11.965321026430082 %)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,077 | INFO     | left removable region: 20
[2026-03-25 17:58:14] 2026-03-25 21:57:42,077 | INFO     | sum of square deviations: 6448679050.0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,079 | INFO     | sum of deviations: 5474284143.0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,079 | INFO     | mean x: 1774467089.0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,079 | INFO     | mean y: 2336374.1054545455
[2026-03-25 17:58:14] 2026-03-25 21:57:42,079 | INFO     | intersect: -1504008874.6301093
[2026-03-25 17:58:14] 2026-03-25 21:57:42,079 | INFO     | chi2: 0.011953448747848863
[2026-03-25 17:58:14] 2026-03-25 21:57:42,079 | INFO     | current memory leak: 0.85 B/s (using 275 data points, chi2=0.01)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | could have reported an average CPU frequency of 4004 MHz (14 samples)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | ..............................
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | . Timing measurements:
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | . get job = 0 s
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | . initial setup = 5 s
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | . payload setup = 6 s
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | . stage-in = 0 s
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | . payload execution = 18341 s
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | . stage-out = 1 s
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | . log creation = 0 s
[2026-03-25 17:58:14] 2026-03-25 21:57:42,080 | INFO     | ..............................
[2026-03-25 17:58:14] 2026-03-25 21:57:42,533 | INFO     | 
[2026-03-25 17:58:14] 2026-03-25 21:57:42,533 | INFO     | job summary report
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | --------------------------------------------------
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | PanDA job id: 7056969249
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | task id: 49180702
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | errors: (none)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | pilot state: finished 
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | transexitcode: 0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | exeerrorcode: 0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | exeerrordiag: 
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | exitcode: 0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | exitmsg: OK
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | cpuconsumptiontime: 71218 s
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | nevents: 400
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | neventsw: 0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | pid: 749213
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | pgrp: 749213
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | corecount: 4
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | event service: False
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | sizes: {0: 2280317, 11: 2280317, 18351: 2312869, 18354: 2321867, 18358: 2321923, 18360: 2322117}
[2026-03-25 17:58:14] 2026-03-25 21:57:42,534 | INFO     | --------------------------------------------------
[2026-03-25 17:58:14] 2026-03-25 21:57:42,535 | INFO     | 
[2026-03-25 17:58:14] 2026-03-25 21:57:42,535 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-03-25 17:58:14] 2026-03-25 21:57:42,553 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,553 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,555 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 17:58:14] 2026-03-25 21:57:42,555 | INFO     | job 7056969249 has completed (purged errors)
[2026-03-25 17:58:14] 2026-03-25 21:57:42,555 | INFO     | overall cleanup function is called
[2026-03-25 17:58:14] 2026-03-25 21:57:43,562 | INFO     | --- collectZombieJob: --- 10, [749213]
[2026-03-25 17:58:14] 2026-03-25 21:57:43,562 | INFO     | zombie collector waiting for pid 749213
[2026-03-25 17:58:14] 2026-03-25 21:57:43,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 17:58:14] 2026-03-25 21:57:43,563 | INFO     | collected zombie processes
[2026-03-25 17:58:14] 2026-03-25 21:57:43,563 | INFO     | will attempt to kill all subprocesses of pid=749213
[2026-03-25 17:58:14] 2026-03-25 21:57:43,729 | INFO     | process IDs to be killed: [749213] (in reverse order)
[2026-03-25 17:58:14] 2026-03-25 21:57:43,791 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 17:58:14] 2026-03-25 21:57:43,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 17:58:14] 2026-03-25 21:57:43,796 | INFO     | did not find any defunct processes belonging to 749213
[2026-03-25 17:58:14] 2026-03-25 21:57:43,801 | INFO     | did not find any defunct processes belonging to 749213
[2026-03-25 17:58:14] 2026-03-25 21:57:43,801 | INFO     | ready for new job
[2026-03-25 17:58:14] 2026-03-25 21:57:43,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 17:58:14] 2026-03-25 21:57:43,803 | INFO     | **************************************
[2026-03-25 17:58:14] 2026-03-25 21:57:43,803 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 17:58:14] 2026-03-25 21:57:43,804 | INFO     | **************************************
[2026-03-25 17:58:14] 2026-03-25 21:57:43,804 | INFO     | 
[2026-03-25 17:58:14] 2026-03-25 21:57:43,805 | INFO     | architecture information:
[2026-03-25 17:58:14] 2026-03-25 21:57:43,805 | INFO     | executing command: cat /etc/os-release
[2026-03-25 17:58:14] 2026-03-25 21:57:43,818 | INFO     | cat /etc/os-release:
[2026-03-25 17:58:14] NAME="CentOS Linux"
[2026-03-25 17:58:14] VERSION="7 (Core)"
[2026-03-25 17:58:14] ID="centos"
[2026-03-25 17:58:14] ID_LIKE="rhel fedora"
[2026-03-25 17:58:14] VERSION_ID="7"
[2026-03-25 17:58:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 17:58:14] ANSI_COLOR="0;31"
[2026-03-25 17:58:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 17:58:14] HOME_URL="https://www.centos.org/"
[2026-03-25 17:58:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 17:58:14] 
[2026-03-25 17:58:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 17:58:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 17:58:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 17:58:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 17:58:14] 
[2026-03-25 17:58:14] 2026-03-25 21:57:43,819 | INFO     | **************************************
[2026-03-25 17:58:14] 2026-03-25 21:57:44,321 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-03-25 17:58:14] 2026-03-25 21:57:44,336 | INFO     | sufficient remaining disk space (1792298450944 B)
[2026-03-25 17:58:14] 2026-03-25 21:57:44,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 17:58:14] 2026-03-25 21:57:44,336 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 17:58:14] 2026-03-25 21:57:44,336 | INFO     | update_server=False
[2026-03-25 17:58:14] 2026-03-25 21:57:44,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 17:58:14] 2026-03-25 21:57:44,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 17:58:14] 2026-03-25 21:57:44,533 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-25 17:58:14] 2026-03-25 21:57:44,533 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-25 17:58:14] 2026-03-25 21:57:44,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:58:14] 2026-03-25 21:57:44,534 | INFO     | will abort loop
[2026-03-25 17:58:14] 2026-03-25 21:57:45,111 | INFO     | all data control threads have been joined
[2026-03-25 17:58:14] 2026-03-25 21:57:45,341 | INFO     | [job] retrieve thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:45,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 17:58:14] 2026-03-25 21:57:45,538 | INFO     | [job] job monitor thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:45,626 | INFO     | all job control threads have been joined
[2026-03-25 17:58:14] 2026-03-25 21:57:45,691 | INFO     | all payload control threads have been joined
[2026-03-25 17:58:14] 2026-03-25 21:57:45,905 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:45,983 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:46,065 | INFO     | [job] validate thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:46,116 | INFO     | [data] control thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:46,309 | INFO     | [payload] failed_post thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:46,342 | INFO     | [data] copytool_out thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:46,353 | INFO     | [data] copytool_in thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:46,405 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:46,631 | INFO     | [job] control thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:46,696 | INFO     | [payload] control thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:46,851 | INFO     | [payload] validate_post thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:47,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 17:58:14] 2026-03-25 21:57:48,159 | INFO     | [job] queue monitor thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:49,432 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:57:54,675 | INFO     | job.realtimelogging is not enabled
[2026-03-25 17:58:14] 2026-03-25 21:57:55,680 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 17:58:14] 2026-03-25 21:58:00,227 | INFO     | [monitor] cgroup control has ended
[2026-03-25 17:58:14] 2026-03-25 21:58:01,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128508187379520)>', '<ExcThread(monitor, started 128507552192256)>']
[2026-03-25 17:58:14] 2026-03-25 21:58:06,667 | INFO     | all workflow threads have been joined
[2026-03-25 17:58:14] 2026-03-25 21:58:06,667 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 17:58:14] 2026-03-25 21:58:06,668 | INFO     | traces error code: 0
[2026-03-25 17:58:14] 2026-03-25 21:58:06,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 17:58:14] 2026-03-25 21:58:14,554 | INFO     | PID=736164 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-25 17:58:14] 2026-03-25 21:58:14,555 | INFO     | .. there are 8 such processes running
[2026-03-25 17:58:14] 2026-03-25 21:58:14,555 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 17:58:14] 2026-03-25 21:58:14,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 17:58:14] 2026-03-25 21:58:14,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 17:58:14] 2026-03-25 21:58:14,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 17:58:14] 2026-03-25 21:58:14,555 | INFO     | [monitor] control thread has ended
[2026-03-25 17:58:14] 2026-03-25 21:58:14,631 [wrapper] ==== pilot stdout END ====
[2026-03-25 17:58:14] 2026-03-25 21:58:14,633 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 17:58:14] 2026-03-25 21:58:14,635 [wrapper] pilotpid: 736164
[2026-03-25 17:58:14] 2026-03-25 21:58:14,637 [wrapper] Pilot exit status: 0
[2026-03-25 17:58:14] 2026-03-25 21:58:14,644 [wrapper] pandaids: 7056969249
[2026-03-25 17:58:14] 2026-03-25 21:58:14,685 [wrapper] cleanup supervisor_pilot  862817 736165
[2026-03-25 17:58:14] 2026-03-25 21:58:14,688 [wrapper] Test setup, not cleaning
[2026-03-25 17:58:14] 2026-03-25 21:58:14,690 [wrapper] apfmon messages muted
[2026-03-25 17:58:14] 2026-03-25 21:58:14,692 [wrapper] ==== wrapper stdout END ====
[2026-03-25 17:58:14] 2026-03-25 21:58:14,694 [wrapper] ==== wrapper stderr END ====
[2026-03-25 17:58:14]  *** Error codes and diagnostics ***
[2026-03-25 17:58:14]     "exeErrorCode": 0,
[2026-03-25 17:58:14]     "exeErrorDiag": "",
[2026-03-25 17:58:14]     "pilotErrorCode": 0,
[2026-03-25 17:58:14]     "pilotErrorDiag": "",
[2026-03-25 17:58:14]  *** Listing of results directory ***
[2026-03-25 17:58:14] total 482724
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc    585013 Mar 16 12:03 pilot3.tar.gz
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc      5111 Mar 16 12:39 queuedata.json
[2026-03-25 17:58:14] -rwx------ 1 boinc boinc     36322 Mar 16 12:39 runpilot2-wrapper.sh
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc       100 Mar 25 12:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 17:58:14] -rwxr-xr-x 1 boinc boinc      7986 Mar 25 12:51 run_atlas
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc       105 Mar 25 12:51 job.xml
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc      9668 Mar 25 12:51 init_data.xml
[2026-03-25 17:58:14] -rw-r--r-- 2 boinc boinc 239847052 Mar 25 12:51 EVNT.49133729._000004.pool.root.1
[2026-03-25 17:58:14] -rw-r--r-- 2 boinc boinc     15845 Mar 25 12:51 start_atlas.sh
[2026-03-25 17:58:14] drwxrwx--x 2 boinc boinc      4096 Mar 25 12:51 shared
[2026-03-25 17:58:14] -rw-r--r-- 2 boinc boinc    597543 Mar 25 12:51 input.tar.gz
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc         0 Mar 25 12:51 boinc_lockfile
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc      2624 Mar 25 12:51 pandaJob.out
[2026-03-25 17:58:14] -rw------- 1 boinc boinc   1011933 Mar 25 12:51 agis_schedconf.cvmfs.json
[2026-03-25 17:58:14] -rw------- 1 boinc boinc       426 Mar 25 12:51 workernode_map.json
[2026-03-25 17:58:14] drwx------ 5 boinc boinc      4096 Mar 25 12:51 pilot3
[2026-03-25 17:58:14] -rw------- 1 boinc boinc 244410376 Mar 25 17:57 HITS.49180702._000094.pool.root.1
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc       530 Mar 25 17:57 boinc_task_state.xml
[2026-03-25 17:58:14] -rw------- 1 boinc boinc      1025 Mar 25 17:57 memory_monitor_summary.json
[2026-03-25 17:58:14] -rw------- 1 boinc boinc   1511579 Mar 25 17:57 agis_ddmendpoints.agis.ALL.json
[2026-03-25 17:58:14] -rw------- 1 boinc boinc    471228 Mar 25 17:57 log.49180702._000094.job.log.tgz.1
[2026-03-25 17:58:14] -rw------- 1 boinc boinc        95 Mar 25 17:57 pilot_heartbeat.json
[2026-03-25 17:58:14] -rw------- 1 boinc boinc      6285 Mar 25 17:57 heartbeat.json
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc      8192 Mar 25 17:57 boinc_mmap_file
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc        28 Mar 25 17:57 wrapper_checkpoint.txt
[2026-03-25 17:58:14] -rw------- 1 boinc boinc       821 Mar 25 17:58 pilotlog.txt
[2026-03-25 17:58:14] -rw------- 1 boinc boinc   2579537 Mar 25 17:58 log.49180702._000094.job.log.1
[2026-03-25 17:58:14] -rw------- 1 boinc boinc       357 Mar 25 17:58 output.list
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc       620 Mar 25 17:58 runtime_log
[2026-03-25 17:58:14] -rw------- 1 boinc boinc   3072000 Mar 25 17:58 result.tar.gz
[2026-03-25 17:58:14] -rw------- 1 boinc boinc       648 Mar 25 17:58 SvnLDmq9PM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhCvLDmIFLmVm.diag
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc      8785 Mar 25 17:58 runtime_log.err
[2026-03-25 17:58:14] -rw-r--r-- 1 boinc boinc     21283 Mar 25 17:58 stderr.txt
[2026-03-25 17:58:14] HITS file was successfully produced:
[2026-03-25 17:58:14] -rw------- 1 boinc boinc 244410376 Mar 25 17:57 shared/HITS.pool.root.1
[2026-03-25 17:58:14]  *** Contents of shared directory: ***
[2026-03-25 17:58:14] total 476520
[2026-03-25 17:58:14] -rw-r--r-- 2 boinc boinc 239847052 Mar 25 12:51 ATLAS.root_0
[2026-03-25 17:58:14] -rw-r--r-- 2 boinc boinc     15845 Mar 25 12:51 start_atlas.sh
[2026-03-25 17:58:14] -rw-r--r-- 2 boinc boinc    597543 Mar 25 12:51 input.tar.gz
[2026-03-25 17:58:14] -rw------- 1 boinc boinc 244410376 Mar 25 17:57 HITS.pool.root.1
[2026-03-25 17:58:14] -rw------- 1 boinc boinc   3072000 Mar 25 17:58 result.tar.gz
17:58:16 (729888): run_atlas exited; CPU time 71561.760806
17:58:16 (729888): called boinc_finish(0)

</stderr_txt>
]]>

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