Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-29 20:27:39 (6916): vboxwrapper version 26210
2026-03-29 20:27:39 (6916): BOINC client version: 7.16.5
2026-03-29 20:27:39 (6916): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-03-29 20:27:39 (6916): Successfully copied 'init_data.xml' to the shared directory.
2026-03-29 20:27:40 (6916): Create VM. (boinc_dc32668b6fdc2f51, slot#4)
2026-03-29 20:27:40 (6916): Setting Memory Size for VM. (4400MB)
2026-03-29 20:27:41 (6916): Setting CPU Count for VM. (4)
2026-03-29 20:27:41 (6916): Setting Chipset Options for VM.
2026-03-29 20:27:41 (6916): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-29 20:27:41 (6916): Setting Boot Options for VM.
2026-03-29 20:27:42 (6916): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-29 20:27:42 (6916): Enabling VM Network Access.
2026-03-29 20:27:42 (6916): Disabling USB Support for VM.
2026-03-29 20:27:43 (6916): Disabling COM Port Support for VM.
2026-03-29 20:27:43 (6916): Disabling LPT Port Support for VM.
2026-03-29 20:27:43 (6916): Disabling Audio Support for VM.
2026-03-29 20:27:43 (6916): Disabling Clipboard Support for VM.
2026-03-29 20:27:44 (6916): Disabling Drag and Drop Support for VM.
2026-03-29 20:27:44 (6916): Adding storage controller(s) to VM.
2026-03-29 20:27:44 (6916): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-29 20:27:45 (6916): Adding VirtualBox Guest Additions to VM.
2026-03-29 20:27:45 (6916): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-29 20:27:45 (6916): forwarding host port 61673 to guest port 80
2026-03-29 20:27:45 (6916): Enabling remote desktop for VM.
2026-03-29 20:27:46 (6916): Enabling shared directory for VM.
2026-03-29 20:27:46 (6916): Starting VM using VBoxManage interface. (boinc_dc32668b6fdc2f51, slot#4)
2026-03-29 20:27:51 (6916): Successfully started VM. (PID = '21644')
2026-03-29 20:27:51 (6916): Reporting VM Process ID to BOINC.
2026-03-29 20:27:51 (6916): Guest Log: BIOS: VirtualBox 5.2.44
2026-03-29 20:27:51 (6916): Guest Log: CPUID EDX: 0x178bfbff
2026-03-29 20:27:51 (6916): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-29 20:27:51 (6916): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-29 20:27:51 (6916): Detected: Web Application Enabled (http://localhost:61673)
2026-03-29 20:27:51 (6916): Detected: Remote Desktop Enabled (localhost:61674)
2026-03-29 20:27:51 (6916): Preference change detected
2026-03-29 20:27:51 (6916): Setting CPU throttle for VM. (100%)
2026-03-29 20:27:51 (6916): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-29 20:27:53 (6916): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-29 20:27:53 (6916): Guest Log: BIOS: Booting from Hard Disk...
2026-03-29 20:27:56 (6916): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-29 20:27:56 (6916): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-29 20:27:56 (6916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-29 20:27:59 (6916): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-29 20:27:59 (6916): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-29 20:28:05 (6916): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-29 20:28:05 (6916): Guest Log: 00:00:00.000154 main     Log opened 2026-03-29T20:28:04.030967000Z
2026-03-29 20:28:05 (6916): Guest Log: 00:00:00.000248 main     OS Product: Linux
2026-03-29 20:28:05 (6916): Guest Log: 00:00:00.000273 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-29 20:28:05 (6916): Guest Log: 00:00:00.000293 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-29 20:28:05 (6916): Guest Log: 00:00:00.000318 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-29 20:28:05 (6916): Guest Log: 00:00:00.000319 main     Process ID: 1324
2026-03-29 20:28:05 (6916): Guest Log: 00:00:00.000319 main     Package type: LINUX_64BITS_GENERIC
2026-03-29 20:28:05 (6916): Guest Log: 00:00:00.001384 main     5.2.32 r132073 started. Verbose level = 0
2026-03-29 20:28:05 (6916): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-29 20:28:05 (6916): Guest Log: [INFO] Mounting shared directory
2026-03-29 20:28:06 (6916): Guest Log: [INFO] Checking for init_data.xml
2026-03-29 20:28:10 (6916): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-29 20:28:10 (6916): Guest Log: [INFO] Detected branch: prod
2026-03-29 20:28:10 (6916): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-29 20:28:10 (6916): Guest Log: Copying input files
2026-03-29 20:28:11 (6916): Guest Log: Copied input files into RunAtlas.
2026-03-29 20:28:11 (6916): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-29 20:28:11 (6916): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-29 20:28:11 (6916): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-29 20:28:11 (6916): Guest Log: Further information can be found at the LHC@home message board.
2026-03-29 20:28:15 (6916): Guest Log: 00:00:10.002998 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 789 155 189 000ns (GuestNow=1 774 805 294 878 290 000 ns GuestLast=1 774 816 084 033 479 000 ns fSetTimeLastLoop=true )
2026-03-29 20:28:20 (6916): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-29 20:28:20 (6916): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-29 20:28:20 (6916): Guest Log: 2.6.3.0 1600 0 32184 157850 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-29 20:28:21 (6916): Guest Log: copied the webapp to /var/www
2026-03-29 20:28:21 (6916): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-29 20:28:21 (6916): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-29 20:28:21 (6916): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-29 20:28:21 (6916): Guest Log:  *** Starting ATLAS job. (PandaID=7056896967 taskID=49176397) ***
2026-03-29 22:07:53 (6916): Status Report: Elapsed Time: '6000.000000'
2026-03-29 22:07:53 (6916): Status Report: CPU Time: '22057.812500'
2026-03-29 23:47:56 (6916): Status Report: Elapsed Time: '12000.000000'
2026-03-29 23:47:56 (6916): Status Report: CPU Time: '45130.093750'
2026-03-30 01:27:59 (6916): Status Report: Elapsed Time: '18000.000000'
2026-03-30 01:27:59 (6916): Status Report: CPU Time: '68925.765625'
2026-03-30 03:08:02 (6916): Status Report: Elapsed Time: '24000.000000'
2026-03-30 03:08:02 (6916): Status Report: CPU Time: '92871.171875'
2026-03-30 03:51:48 (6916): Guest Log:  *** Job finished ***
2026-03-30 03:51:48 (6916): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:50:54,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:50:58,469 | INFO     | [data] queue_monitor thread has finished
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:41,009 | INFO     | [monitor] cgroup control has ended
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:42,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140427352491840)>', '<ExcThread(monitor, started 140426740741888)>']
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:43,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:43,001 | INFO     | [monitor] control thread has ended
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:47,874 | INFO     | all workflow threads have been joined
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:47,874 | INFO     | end of generic workflow (traces error code: 0)
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:47,875 | INFO     | traces error code: 0
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:47,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:47,984 [wrapper] ==== pilot stdout END ====
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:47,989 [wrapper] ==== wrapper stdout RESUME ====
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:47,994 [wrapper] pilotpid: 5989
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:47,999 [wrapper] Pilot exit status: 0
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:48,044 [wrapper] pandaids: 7056896967
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:48,077 [wrapper] cleanup supervisor_pilot 31574 5990
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:48,084 [wrapper] Test setup, not cleaning
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:48,089 [wrapper] apfmon messages muted
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:48,094 [wrapper] ==== wrapper stdout END ====
2026-03-30 03:51:48 (6916): Guest Log: 2026-03-30 00:51:48,100 [wrapper] ==== wrapper stderr END ====
2026-03-30 03:51:48 (6916): Guest Log:  *** Error codes and diagnostics ***
2026-03-30 03:51:48 (6916): Guest Log:     "exeErrorCode": 0,
2026-03-30 03:51:48 (6916): Guest Log:     "exeErrorDiag": "",
2026-03-30 03:51:48 (6916): Guest Log:     "pilotErrorCode": 0,
2026-03-30 03:51:48 (6916): Guest Log:     "pilotErrorDiag": "",
2026-03-30 03:51:48 (6916): Guest Log:  *** Listing of results directory ***
2026-03-30 03:51:48 (6916): Guest Log: total 246980
2026-03-30 03:51:48 (6916): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 16 12:24 pilot3.tar.gz
2026-03-30 03:51:48 (6916): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 16 13:07 runpilot2-wrapper.sh
2026-03-30 03:51:48 (6916): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 16 13:10 queuedata.json
2026-03-30 03:51:48 (6916): Guest Log: -rwxr-xr-x. 1 atlas atlas      8899 Mar 29 17:28 init_data.xml
2026-03-30 03:51:48 (6916): Guest Log: -rwxr-xr-x. 1 atlas atlas    597556 Mar 29 17:28 input.tar.gz
2026-03-30 03:51:48 (6916): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 29 17:28 start_atlas.sh
2026-03-30 03:51:48 (6916): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 29 17:28 EVNT.49133815._000014.pool.root.1 -> /data/./ATLAS.root_0
2026-03-30 03:51:48 (6916): Guest Log: -rw-r--r--. 1 atlas atlas      2626 Mar 29 17:28 pandaJob.out
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas   1003389 Mar 29 17:29 agis_schedconf.cvmfs.json
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas       426 Mar 29 17:29 workernode_map.json
2026-03-30 03:51:48 (6916): Guest Log: drwx------. 5 atlas atlas      4096 Mar 29 17:29 pilot3
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas 240604675 Mar 30 00:50 HITS.49176397._000336.pool.root.1
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas        95 Mar 30 00:50 pilot_heartbeat.json
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas      1030 Mar 30 00:50 memory_monitor_summary.json
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 30 00:50 agis_ddmendpoints.agis.ALL.json
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas    562029 Mar 30 00:50 log.49176397._000336.job.log.tgz.1
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas      6369 Mar 30 00:50 heartbeat.json
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas      4608 Mar 30 00:51 pilotlog.txt
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas   3656218 Mar 30 00:51 log.49176397._000336.job.log.1
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas       357 Mar 30 00:51 output.list
2026-03-30 03:51:48 (6916): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 30 00:51 runtime_log
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas   4239360 Mar 30 00:51 result.tar.gz
2026-03-30 03:51:48 (6916): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Mar 30 00:51 runtime_log.err
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas       671 Mar 30 00:51 GOKMDmsqMM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZGtLDmTP6dHo.diag
2026-03-30 03:51:48 (6916): Guest Log: Looking for outputfile HITS.49176397._000336.pool.root.1
2026-03-30 03:51:48 (6916): Guest Log: HITS file was successfully produced
2026-03-30 03:51:48 (6916): Guest Log: -rw-------. 1 atlas atlas 240604675 Mar 30 00:50 /home/atlas/RunAtlas/HITS.49176397._000336.pool.root.1
2026-03-30 03:51:50 (6916): Guest Log: Successfully finished the ATLAS job!
2026-03-30 03:51:50 (6916): Guest Log: Copying the results back to the shared directory!
2026-03-30 03:51:50 (6916): Guest Log:  *** Contents of shared directory: ***
2026-03-30 03:51:50 (6916): Guest Log: total 480572
2026-03-30 03:51:50 (6916): Guest Log: -rwxrwxrwx. 1 root root 246630962 Mar 29 17:27 ATLAS.root_0
2026-03-30 03:51:50 (6916): Guest Log: -rwxrwxrwx. 1 root root 240604675 Mar 30 00:51 HITS.pool.root.1
2026-03-30 03:51:50 (6916): Guest Log: -rwxrwxrwx. 1 root root      8899 Mar 29 17:27 init_data.xml
2026-03-30 03:51:50 (6916): Guest Log: -rwxrwxrwx. 1 root root    597556 Mar 24 18:49 input.tar.gz
2026-03-30 03:51:50 (6916): Guest Log: -rwxrwxrwx. 1 root root   4239360 Mar 30 00:51 result.tar.gz
2026-03-30 03:51:50 (6916): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 24 18:49 start_atlas.sh
2026-03-30 03:51:50 (6916): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-30 03:51:50 (6916): VM Completion File Detected.
2026-03-30 03:51:50 (6916): Powering off VM.
2026-03-30 03:51:50 (6916): Successfully stopped VM.
2026-03-30 03:51:50 (6916): Deregistering VM. (boinc_dc32668b6fdc2f51, slot#4)
2026-03-30 03:51:51 (6916): Removing network bandwidth throttle group from VM.
2026-03-30 03:51:51 (6916): Removing VM from VirtualBox.
2026-03-30 03:51:56 (6916): called boinc_finish(0)

</stderr_txt>
]]>

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