Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-26 19:42:02 (7608): vboxwrapper version 26210
2026-03-26 19:42:02 (7608): BOINC client version: 7.16.5
2026-03-26 19:42:03 (7608): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-03-26 19:42:03 (7608): Successfully copied 'init_data.xml' to the shared directory.
2026-03-26 19:42:03 (7608): Create VM. (boinc_9d1e3aeef9a69a57, slot#4)
2026-03-26 19:42:04 (7608): Setting Memory Size for VM. (4400MB)
2026-03-26 19:42:04 (7608): Setting CPU Count for VM. (4)
2026-03-26 19:42:04 (7608): Setting Chipset Options for VM.
2026-03-26 19:42:05 (7608): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-26 19:42:05 (7608): Setting Boot Options for VM.
2026-03-26 19:42:05 (7608): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-26 19:42:06 (7608): Enabling VM Network Access.
2026-03-26 19:42:06 (7608): Disabling USB Support for VM.
2026-03-26 19:42:06 (7608): Disabling COM Port Support for VM.
2026-03-26 19:42:06 (7608): Disabling LPT Port Support for VM.
2026-03-26 19:42:07 (7608): Disabling Audio Support for VM.
2026-03-26 19:42:07 (7608): Disabling Clipboard Support for VM.
2026-03-26 19:42:07 (7608): Disabling Drag and Drop Support for VM.
2026-03-26 19:42:07 (7608): Adding storage controller(s) to VM.
2026-03-26 19:42:08 (7608): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-26 19:42:08 (7608): Adding VirtualBox Guest Additions to VM.
2026-03-26 19:42:08 (7608): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-26 19:42:09 (7608): forwarding host port 51820 to guest port 80
2026-03-26 19:42:09 (7608): Enabling remote desktop for VM.
2026-03-26 19:42:09 (7608): Enabling shared directory for VM.
2026-03-26 19:42:10 (7608): Starting VM using VBoxManage interface. (boinc_9d1e3aeef9a69a57, slot#4)
2026-03-26 19:42:14 (7608): Successfully started VM. (PID = '11056')
2026-03-26 19:42:14 (7608): Reporting VM Process ID to BOINC.
2026-03-26 19:42:14 (7608): Guest Log: BIOS: VirtualBox 5.2.44
2026-03-26 19:42:14 (7608): Guest Log: CPUID EDX: 0x178bfbff
2026-03-26 19:42:14 (7608): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-26 19:42:14 (7608): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-26 19:42:14 (7608): Detected: Web Application Enabled (http://localhost:51820)
2026-03-26 19:42:14 (7608): Detected: Remote Desktop Enabled (localhost:51821)
2026-03-26 19:42:14 (7608): Preference change detected
2026-03-26 19:42:14 (7608): Setting CPU throttle for VM. (100%)
2026-03-26 19:42:14 (7608): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-26 19:42:16 (7608): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-26 19:42:16 (7608): Guest Log: BIOS: Booting from Hard Disk...
2026-03-26 19:42:19 (7608): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-26 19:42:19 (7608): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-26 19:42:19 (7608): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-26 19:42:24 (7608): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-26 19:42:24 (7608): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-26 19:42:29 (7608): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-26 19:42:29 (7608): Guest Log: 00:00:00.000197 main     Log opened 2026-03-26T19:42:27.705014000Z
2026-03-26 19:42:29 (7608): Guest Log: 00:00:00.000306 main     OS Product: Linux
2026-03-26 19:42:29 (7608): Guest Log: 00:00:00.000339 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-26 19:42:29 (7608): Guest Log: 00:00:00.000394 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-26 19:42:29 (7608): Guest Log: 00:00:00.000431 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-26 19:42:29 (7608): Guest Log: 00:00:00.000432 main     Process ID: 1304
2026-03-26 19:42:29 (7608): Guest Log: 00:00:00.000433 main     Package type: LINUX_64BITS_GENERIC
2026-03-26 19:42:29 (7608): Guest Log: 00:00:00.001381 main     5.2.32 r132073 started. Verbose level = 0
2026-03-26 19:42:29 (7608): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-26 19:42:29 (7608): Guest Log: [INFO] Mounting shared directory
2026-03-26 19:42:29 (7608): Guest Log: [INFO] Checking for init_data.xml
2026-03-26 19:42:34 (7608): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-26 19:42:34 (7608): Guest Log: [INFO] Detected branch: prod
2026-03-26 19:42:34 (7608): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-26 19:42:34 (7608): Guest Log: Copying input files
2026-03-26 19:42:36 (7608): Guest Log: Copied input files into RunAtlas.
2026-03-26 19:42:36 (7608): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-26 19:42:36 (7608): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-26 19:42:36 (7608): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-26 19:42:36 (7608): Guest Log: Further information can be found at the LHC@home message board.
2026-03-26 19:42:39 (7608): Guest Log: 00:00:10.004285 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 738 342 000ns (GuestNow=1 774 546 958 969 358 000 ns GuestLast=1 774 554 147 707 700 000 ns fSetTimeLastLoop=true )
2026-03-26 19:43:40 (7608): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-26 19:43:40 (7608): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-26 19:43:40 (7608): Guest Log: 2.6.3.0 1581 1 32072 157729 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-26 19:43:41 (7608): Guest Log: copied the webapp to /var/www
2026-03-26 19:43:41 (7608): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-26 19:43:41 (7608): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-26 19:43:41 (7608): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-26 19:43:41 (7608): Guest Log:  *** Starting ATLAS job. (PandaID=7056945532 taskID=49178853) ***
2026-03-26 21:22:17 (7608): Status Report: Elapsed Time: '6000.000000'
2026-03-26 21:22:17 (7608): Status Report: CPU Time: '21401.546875'
2026-03-26 23:02:20 (7608): Status Report: Elapsed Time: '12000.000000'
2026-03-26 23:02:20 (7608): Status Report: CPU Time: '44822.468750'
2026-03-27 00:42:22 (7608): Status Report: Elapsed Time: '18000.000000'
2026-03-27 00:42:22 (7608): Status Report: CPU Time: '68084.796875'
2026-03-27 02:22:25 (7608): Status Report: Elapsed Time: '24000.000000'
2026-03-27 02:22:25 (7608): Status Report: CPU Time: '91544.500000'
2026-03-27 04:02:29 (7608): Status Report: Elapsed Time: '30000.432014'
2026-03-27 04:02:29 (7608): Status Report: CPU Time: '114680.156250'
2026-03-27 05:27:15 (7608): Guest Log:  *** Job finished ***
2026-03-27 05:27:15 (7608): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:26:58,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:26:58,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:07,119 | INFO     | [monitor] cgroup control has ended
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:07,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203738130240)>', '<ExcThread(monitor, started 140203142399744)>']
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:07,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:07,564 | INFO     | [monitor] control thread has ended
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,503 | INFO     | all workflow threads have been joined
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,503 | INFO     | end of generic workflow (traces error code: 0)
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,503 | INFO     | traces error code: 0
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,608 [wrapper] ==== pilot stdout END ====
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,613 [wrapper] ==== wrapper stdout RESUME ====
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,618 [wrapper] pilotpid: 5996
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,622 [wrapper] Pilot exit status: 0
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,670 [wrapper] pandaids: 7056945532
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,704 [wrapper] cleanup supervisor_pilot  1935 5997
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,710 [wrapper] Test setup, not cleaning
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,714 [wrapper] apfmon messages muted
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,718 [wrapper] ==== wrapper stdout END ====
2026-03-27 05:27:15 (7608): Guest Log: 2026-03-27 03:27:12,722 [wrapper] ==== wrapper stderr END ====
2026-03-27 05:27:15 (7608): Guest Log:  *** Error codes and diagnostics ***
2026-03-27 05:27:15 (7608): Guest Log:     "exeErrorCode": 0,
2026-03-27 05:27:15 (7608): Guest Log:     "exeErrorDiag": "",
2026-03-27 05:27:15 (7608): Guest Log:     "pilotErrorCode": 0,
2026-03-27 05:27:15 (7608): Guest Log:     "pilotErrorDiag": "",
2026-03-27 05:27:15 (7608): Guest Log:  *** Listing of results directory ***
2026-03-27 05:27:15 (7608): Guest Log: total 254712
2026-03-27 05:27:15 (7608): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 16 15:03 pilot3.tar.gz
2026-03-27 05:27:15 (7608): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 16 15:04 queuedata.json
2026-03-27 05:27:15 (7608): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 16 15:04 runpilot2-wrapper.sh
2026-03-27 05:27:15 (7608): Guest Log: -rwxr-xr-x. 1 atlas atlas      8898 Mar 26 17:42 init_data.xml
2026-03-27 05:27:15 (7608): Guest Log: -rwxr-xr-x. 1 atlas atlas    597544 Mar 26 17:42 input.tar.gz
2026-03-27 05:27:15 (7608): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 26 17:42 start_atlas.sh
2026-03-27 05:27:15 (7608): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 26 17:42 EVNT.49129889._000029.pool.root.1 -> /data/./ATLAS.root_0
2026-03-27 05:27:15 (7608): Guest Log: -rw-r--r--. 1 atlas atlas      2659 Mar 26 17:43 pandaJob.out
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas   1012360 Mar 26 17:44 agis_schedconf.cvmfs.json
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas       426 Mar 26 17:44 workernode_map.json
2026-03-27 05:27:15 (7608): Guest Log: drwx------. 5 atlas atlas      4096 Mar 26 17:44 pilot3
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas 246011120 Mar 27 03:25 HITS.49178853._000702.pool.root.1
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas      1029 Mar 27 03:26 memory_monitor_summary.json
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 27 03:26 agis_ddmendpoints.agis.ALL.json
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas    665101 Mar 27 03:26 log.49178853._000702.job.log.tgz.1
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas      6368 Mar 27 03:26 heartbeat.json
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas        95 Mar 27 03:26 pilot_heartbeat.json
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 27 03:27 pilotlog.txt
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas   4804338 Mar 27 03:27 log.49178853._000702.job.log.1
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas       357 Mar 27 03:27 output.list
2026-03-27 05:27:15 (7608): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 27 03:27 runtime_log
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas   5488640 Mar 27 03:27 result.tar.gz
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas       671 Mar 27 03:27 yCRKDmwfOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzgxLDmHcFgZn.diag
2026-03-27 05:27:15 (7608): Guest Log: -rw-r--r--. 1 atlas atlas      8788 Mar 27 03:27 runtime_log.err
2026-03-27 05:27:15 (7608): Guest Log: Looking for outputfile HITS.49178853._000702.pool.root.1
2026-03-27 05:27:15 (7608): Guest Log: HITS file was successfully produced
2026-03-27 05:27:15 (7608): Guest Log: -rw-------. 1 atlas atlas 246011120 Mar 27 03:25 /home/atlas/RunAtlas/HITS.49178853._000702.pool.root.1
2026-03-27 05:27:16 (7608): Guest Log: Successfully finished the ATLAS job!
2026-03-27 05:27:16 (7608): Guest Log: Copying the results back to the shared directory!
2026-03-27 05:27:17 (7608): Guest Log:  *** Contents of shared directory: ***
2026-03-27 05:27:17 (7608): Guest Log: total 490128
2026-03-27 05:27:17 (7608): Guest Log: -rwxrwxrwx. 1 root root 249760618 Mar 26 17:42 ATLAS.root_0
2026-03-27 05:27:17 (7608): Guest Log: -rwxrwxrwx. 1 root root 246011120 Mar 27 03:27 HITS.pool.root.1
2026-03-27 05:27:17 (7608): Guest Log: -rwxrwxrwx. 1 root root      8898 Mar 26 17:42 init_data.xml
2026-03-27 05:27:17 (7608): Guest Log: -rwxrwxrwx. 1 root root    597544 Mar 24 18:47 input.tar.gz
2026-03-27 05:27:17 (7608): Guest Log: -rwxrwxrwx. 1 root root   5488640 Mar 27 03:27 result.tar.gz
2026-03-27 05:27:17 (7608): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 24 18:47 start_atlas.sh
2026-03-27 05:27:17 (7608): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-27 05:27:17 (7608): VM Completion File Detected.
2026-03-27 05:27:17 (7608): Powering off VM.
2026-03-27 05:27:18 (7608): Successfully stopped VM.
2026-03-27 05:27:18 (7608): Deregistering VM. (boinc_9d1e3aeef9a69a57, slot#4)
2026-03-27 05:27:18 (7608): Removing network bandwidth throttle group from VM.
2026-03-27 05:27:18 (7608): Removing VM from VirtualBox.
2026-03-27 05:27:23 (7608): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN