Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:33:32 (22359): wrapper (7.7.26015): starting
23:33:32 (22359): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 23:33:32] Arguments: --nthreads 8
[2026-03-24 23:33:32] Threads: 8
[2026-03-24 23:33:32] Checking for CVMFS
[2026-03-24 23:33:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 23:33:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 23:33:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 23:33:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 23:33:32] 2.11.0.0 7984 236202 95576 157660 2 186 3515347 4096000 1862 130560 2 15401993 99.464 15380526 422 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 23:33:32] CVMFS is ok
[2026-03-24 23:33:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 23:33:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 23:33:32] Further information can be found at the LHC@home message board.
[2026-03-24 23:33:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 23:33:32] Checking for apptainer binary...
[2026-03-24 23:33:32] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 23:33:32] apptainer is not installed, using version from CVMFS
[2026-03-24 23:33:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 23:33:32] WARNING: Environment variable TMPDIR already has value [/tmp/job_11388630/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node221
[2026-03-24 23:33:32] apptainer works
[2026-03-24 23:33:32] Set ATHENA_PROC_NUMBER=8
[2026-03-24 23:33:32] Set ATHENA_CORE_NUMBER=8
[2026-03-24 23:33:32] Starting ATLAS job with PandaID=7056961698
[2026-03-24 23:33:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11388630/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 01:28:58]  *** The last 200 lines of the pilot log: ***
[2026-03-25 01:28:58] 2026-03-25 00:28:25,605 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,605 | INFO     | log transfer has been attempted: DONE
[2026-03-25 01:28:58] 2026-03-25 00:28:25,605 | INFO     | job 7056961698 has finished - writing final server update
[2026-03-25 01:28:58] 2026-03-25 00:28:25,605 | INFO     | total number of processed events: 400 (read)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,622 | INFO     | using path: /tmp/job_11388630/atlas/pilot/slots/0/PanDA_Pilot-7056961698/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,623 | INFO     | extracted standard info from prmon json
[2026-03-25 01:28:58] 2026-03-25 00:28:25,623 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 01:28:58] 2026-03-25 00:28:25,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 01:28:58] 2026-03-25 00:28:25,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 01:28:58] 2026-03-25 00:28:25,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 01:28:58] 2026-03-25 00:28:25,624 | INFO     | fitting pss+swap vs Time
[2026-03-25 01:28:58] 2026-03-25 00:28:25,624 | INFO     | sum of square deviations: 447383272.0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | sum of deviations: 34611746479.99999
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | mean x: 1774395053.0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | mean y: 2448559.8053097343
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | intersect: -137273385324.75294
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | chi2: 3.7843775149349184
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | sum of square deviations: 390582207.0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | sum of deviations: 32985785227.5
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | mean x: 1774394900.5
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | mean y: 2444196.175925926
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | intersect: -149850283469.5885
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | chi2: 3.798150583490721
[2026-03-25 01:28:58] 2026-03-25 00:28:25,625 | INFO     | current chi2=3.798150583490721 (change=-0.36394541774566347 %)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,626 | INFO     | right removable region: 107
[2026-03-25 01:28:58] 2026-03-25 00:28:25,626 | INFO     | sum of square deviations: 390582207.0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,626 | INFO     | sum of deviations: 1830103608.5000002
[2026-03-25 01:28:58] 2026-03-25 00:28:25,626 | INFO     | mean x: 1774395205.5
[2026-03-25 01:28:58] 2026-03-25 00:28:25,626 | INFO     | mean y: 2535955.8055555555
[2026-03-25 01:28:58] 2026-03-25 00:28:25,626 | INFO     | intersect: -8311532146.356225
[2026-03-25 01:28:58] 2026-03-25 00:28:25,626 | INFO     | chi2: 0.04229115999374448
[2026-03-25 01:28:58] 2026-03-25 00:28:25,626 | INFO     | current chi2=0.04229115999374448 (change=98.88248041251583 %)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,626 | INFO     | sum of square deviations: 338804492.0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | sum of deviations: -909622240.0000001
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | mean x: 1774395358.0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | mean y: 2543857.786407767
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | intersect: 4766440200.074461
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | chi2: 0.0032624237952290206
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | current chi2=0.0032624237952290206 (change=92.28580205482284 %)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | sum of square deviations: 291817564.5
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | sum of deviations: -1077499577.4999995
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | mean x: 1774395510.5
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | mean y: 2544388.4183673467
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | intersect: 6554276173.849144
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | chi2: 0.0028428004340823113
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | current chi2=0.0028428004340823113 (change=12.862319167741726 %)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,627 | INFO     | left removable region: 30
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | sum of square deviations: 141539398.0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | sum of deviations: 48934322.00000006
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | mean x: 1774395785.0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | mean y: 2539333.961038961
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | intersect: -610921341.4802461
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | chi2: 0.0013186455839805228
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | current memory leak: 0.35 B/s (using 77 data points, chi2=0.00)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | could have reported an average CPU frequency of 2365 MHz (7 samples)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | ..............................
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | . Timing measurements:
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | . get job = 0 s
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | . initial setup = 2 s
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | . payload setup = 3 s
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | . stage-in = 0 s
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | . payload execution = 6862 s
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | . stage-out = 0 s
[2026-03-25 01:28:58] 2026-03-25 00:28:25,628 | INFO     | . log creation = 0 s
[2026-03-25 01:28:58] 2026-03-25 00:28:25,629 | INFO     | ..............................
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | 
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | job summary report
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | --------------------------------------------------
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | PanDA job id: 7056961698
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | task id: 49180110
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | errors: (none)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | pilot state: finished 
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | transexitcode: 0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | exeerrorcode: 0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | exeerrordiag: 
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | exitcode: 0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | exitmsg: OK
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | cpuconsumptiontime: 49081 s
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | nevents: 400
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | neventsw: 0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | pid: 30736
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | pgrp: 30736
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | corecount: 8
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | event service: False
[2026-03-25 01:28:58] 2026-03-25 00:28:25,676 | INFO     | sizes: {0: 2280400, 11: 2280400, 6870: 2316653, 6874: 2316653, 6875: 2316847}
[2026-03-25 01:28:58] 2026-03-25 00:28:25,677 | INFO     | --------------------------------------------------
[2026-03-25 01:28:58] 2026-03-25 00:28:25,677 | INFO     | 
[2026-03-25 01:28:58] 2026-03-25 00:28:25,677 | INFO     | executing command: ls -lF /tmp/job_11388630/atlas/pilot/slots/0
[2026-03-25 01:28:58] 2026-03-25 00:28:25,686 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,686 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,686 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,686 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | job 7056961698 has completed (purged errors)
[2026-03-25 01:28:58] 2026-03-25 00:28:25,687 | INFO     | overall cleanup function is called
[2026-03-25 01:28:58] 2026-03-25 00:28:26,693 | INFO     | --- collectZombieJob: --- 10, [30736]
[2026-03-25 01:28:58] 2026-03-25 00:28:26,693 | INFO     | zombie collector waiting for pid 30736
[2026-03-25 01:28:58] 2026-03-25 00:28:26,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 01:28:58] 2026-03-25 00:28:26,693 | INFO     | collected zombie processes
[2026-03-25 01:28:58] 2026-03-25 00:28:26,693 | INFO     | will attempt to kill all subprocesses of pid=30736
[2026-03-25 01:28:58] 2026-03-25 00:28:26,793 | INFO     | process IDs to be killed: [30736] (in reverse order)
[2026-03-25 01:28:58] 2026-03-25 00:28:26,829 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 01:28:58] 2026-03-25 00:28:26,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 01:28:58] 2026-03-25 00:28:26,833 | INFO     | did not find any defunct processes belonging to 30736
[2026-03-25 01:28:58] 2026-03-25 00:28:26,836 | INFO     | did not find any defunct processes belonging to 30736
[2026-03-25 01:28:58] 2026-03-25 00:28:26,836 | INFO     | ready for new job
[2026-03-25 01:28:58] 2026-03-25 00:28:26,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 01:28:58] 2026-03-25 00:28:26,837 | INFO     | **************************************
[2026-03-25 01:28:58] 2026-03-25 00:28:26,837 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 01:28:58] 2026-03-25 00:28:26,837 | INFO     | **************************************
[2026-03-25 01:28:58] 2026-03-25 00:28:26,837 | INFO     | 
[2026-03-25 01:28:58] 2026-03-25 00:28:26,850 | INFO     | architecture information:
[2026-03-25 01:28:58] 2026-03-25 00:28:26,850 | INFO     | executing command: cat /etc/os-release
[2026-03-25 01:28:58] 2026-03-25 00:28:26,856 | INFO     | cat /etc/os-release:
[2026-03-25 01:28:58] NAME="CentOS Linux"
[2026-03-25 01:28:58] VERSION="7 (Core)"
[2026-03-25 01:28:58] ID="centos"
[2026-03-25 01:28:58] ID_LIKE="rhel fedora"
[2026-03-25 01:28:58] VERSION_ID="7"
[2026-03-25 01:28:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 01:28:58] ANSI_COLOR="0;31"
[2026-03-25 01:28:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 01:28:58] HOME_URL="https://www.centos.org/"
[2026-03-25 01:28:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 01:28:58] 
[2026-03-25 01:28:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 01:28:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 01:28:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 01:28:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 01:28:58] 
[2026-03-25 01:28:58] 2026-03-25 00:28:26,856 | INFO     | **************************************
[2026-03-25 01:28:58] 2026-03-25 00:28:27,359 | INFO     | executing command: df -mP /tmp/job_11388630/atlas/pilot/slots/0
[2026-03-25 01:28:58] 2026-03-25 00:28:27,365 | INFO     | sufficient remaining disk space (224318717952 B)
[2026-03-25 01:28:58] 2026-03-25 00:28:27,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 01:28:58] 2026-03-25 00:28:27,365 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 01:28:58] 2026-03-25 00:28:27,365 | INFO     | update_server=False
[2026-03-25 01:28:58] 2026-03-25 00:28:27,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 01:28:58] 2026-03-25 00:28:27,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 01:28:58] 2026-03-25 00:28:27,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:28:58] 2026-03-25 00:28:27,539 | INFO     | all payload control threads have been joined
[2026-03-25 01:28:58] 2026-03-25 00:28:27,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:28:58] 2026-03-25 00:28:27,902 | INFO     | aborting loop
[2026-03-25 01:28:58] 2026-03-25 00:28:28,138 | INFO     | all data control threads have been joined
[2026-03-25 01:28:58] 2026-03-25 00:28:28,339 | INFO     | all job control threads have been joined
[2026-03-25 01:28:58] 2026-03-25 00:28:28,370 | INFO     | [job] retrieve thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:28,370 | INFO     | [job] queue monitor thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:28,371 | INFO     | [payload] failed_post thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:28,544 | INFO     | [payload] control thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:28,557 | INFO     | [data] copytool_in thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:28,907 | INFO     | [job] job monitor thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:29,030 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:29,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:29,143 | INFO     | [data] control thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:29,344 | INFO     | [job] control thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:29,370 | INFO     | [data] copytool_out thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:29,576 | INFO     | [payload] validate_post thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:29,578 | INFO     | [job] validate thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:29,672 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:29,695 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:30,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 01:28:58] 2026-03-25 00:28:34,356 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 01:28:58] 2026-03-25 00:28:50,359 | INFO     | [monitor] cgroup control has ended
[2026-03-25 01:28:58] 2026-03-25 00:28:50,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-25 01:28:58] 2026-03-25 00:28:55,983 | INFO     | all workflow threads have been joined
[2026-03-25 01:28:58] 2026-03-25 00:28:55,983 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 01:28:58] 2026-03-25 00:28:55,983 | INFO     | traces error code: 0
[2026-03-25 01:28:58] 2026-03-25 00:28:55,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 01:28:58] 2026-03-25 00:28:58,159 | INFO     | PID=26179 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 01:28:58] 2026-03-25 00:28:58,159 | INFO     | .. there are 4 such processes running
[2026-03-25 01:28:58] 2026-03-25 00:28:58,159 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 01:28:58] 2026-03-25 00:28:58,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 01:28:58] 2026-03-25 00:28:58,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 01:28:58] 2026-03-25 00:28:58,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 01:28:58] 2026-03-25 00:28:58,159 | INFO     | [monitor] control thread has ended
[2026-03-25 01:28:58] 2026-03-25 00:28:58,210 [wrapper] ==== pilot stdout END ====
[2026-03-25 01:28:58] 2026-03-25 00:28:58,211 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 01:28:58] 2026-03-25 00:28:58,212 [wrapper] pilotpid: 26179
[2026-03-25 01:28:58] 2026-03-25 00:28:58,213 [wrapper] Pilot exit status: 0
[2026-03-25 01:28:58] 2026-03-25 00:28:58,217 [wrapper] pandaids: 7056961698
[2026-03-25 01:28:58] 2026-03-25 00:28:58,241 [wrapper] cleanup supervisor_pilot 26880 26180
[2026-03-25 01:28:58] 2026-03-25 00:28:58,242 [wrapper] Test setup, not cleaning
[2026-03-25 01:28:58] 2026-03-25 00:28:58,243 [wrapper] apfmon messages muted
[2026-03-25 01:28:58] 2026-03-25 00:28:58,244 [wrapper] ==== wrapper stdout END ====
[2026-03-25 01:28:58] 2026-03-25 00:28:58,246 [wrapper] ==== wrapper stderr END ====
[2026-03-25 01:28:58]  *** Error codes and diagnostics ***
[2026-03-25 01:28:58]     "exeErrorCode": 0,
[2026-03-25 01:28:58]     "exeErrorDiag": "",
[2026-03-25 01:28:58]     "pilotErrorCode": 0,
[2026-03-25 01:28:58]     "pilotErrorDiag": "",
[2026-03-25 01:28:58]  *** Listing of results directory ***
[2026-03-25 01:28:58] total 492228
[2026-03-25 01:28:58] -rwx------ 1 mf493845 unix-user     36322 Mar 16 17:00 runpilot2-wrapper.sh
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user    585013 Mar 16 17:03 pilot3.tar.gz
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user      5111 Mar 16 17:04 queuedata.json
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user       100 Mar 24 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 01:28:58] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 22:29 run_atlas
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user       105 Mar 24 22:29 job.xml
[2026-03-25 01:28:58] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:33 start_atlas.sh
[2026-03-25 01:28:58] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 23:33 shared
[2026-03-25 01:28:58] -rw-r--r-- 2 mf493845 unix-user    597543 Mar 24 23:33 input.tar.gz
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user      6389 Mar 24 23:33 init_data.xml
[2026-03-25 01:28:58] -rw-r--r-- 2 mf493845 unix-user 250451476 Mar 24 23:33 EVNT.49132718._000032.pool.root.1
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user         0 Mar 24 23:33 boinc_setup_complete
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user      8192 Mar 24 23:33 boinc_mmap_file
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user         0 Mar 24 23:33 boinc_lockfile
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user      2592 Mar 24 23:33 pandaJob.out
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user   1010852 Mar 24 23:33 agis_schedconf.cvmfs.json
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user   1511579 Mar 24 23:33 agis_ddmendpoints.agis.ALL.json
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user       416 Mar 24 23:33 workernode_map.json
[2026-03-25 01:28:58] drwx------ 5 mf493845 unix-user       440 Mar 24 23:33 pilot3
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user 246946483 Mar 25 01:27 HITS.49180110._000406.pool.root.1
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user        95 Mar 25 01:28 pilot_heartbeat.json
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user      1015 Mar 25 01:28 memory_monitor_summary.json
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user    348300 Mar 25 01:28 log.49180110._000406.job.log.tgz.1
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user      6305 Mar 25 01:28 heartbeat.json
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user       820 Mar 25 01:28 pilotlog.txt
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user   1017840 Mar 25 01:28 log.49180110._000406.job.log.1
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user       357 Mar 25 01:28 output.list
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user       620 Mar 25 01:28 runtime_log
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user   1382400 Mar 25 01:28 result.tar.gz
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user      9219 Mar 25 01:28 runtime_log.err
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user       644 Mar 25 01:28 QpTMDmHYPM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEMyLDmOIuNEm.diag
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user     21512 Mar 25 01:28 stderr.txt
[2026-03-25 01:28:58] HITS file was successfully produced:
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user 246946483 Mar 25 01:27 shared/HITS.pool.root.1
[2026-03-25 01:28:58]  *** Contents of shared directory: ***
[2026-03-25 01:28:58] total 487696
[2026-03-25 01:28:58] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:33 start_atlas.sh
[2026-03-25 01:28:58] -rw-r--r-- 2 mf493845 unix-user    597543 Mar 24 23:33 input.tar.gz
[2026-03-25 01:28:58] -rw-r--r-- 2 mf493845 unix-user 250451476 Mar 24 23:33 ATLAS.root_0
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user 246946483 Mar 25 01:27 HITS.pool.root.1
[2026-03-25 01:28:58] -rw------- 1 mf493845 unix-user   1382400 Mar 25 01:28 result.tar.gz
01:28:59 (22359): run_atlas exited; CPU time 49187.369992
01:28:59 (22359): called boinc_finish(0)

</stderr_txt>
]]>

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