Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:31:28 (28000): wrapper (7.7.26015): starting
23:31:28 (28000): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 23:31:28] Arguments: --nthreads 8
[2026-03-24 23:31:28] Threads: 8
[2026-03-24 23:31:28] Checking for CVMFS
[2026-03-24 23:31:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 23:31:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 23:31:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 23:31:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 23:31:28] 2.11.0.0 7984 236200 95924 157660 0 186 3431955 4096001 1030 130560 2 15309430 99.461 15335184 423 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 23:31:28] CVMFS is ok
[2026-03-24 23:31:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 23:31:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 23:31:28] Further information can be found at the LHC@home message board.
[2026-03-24 23:31:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 23:31:28] Checking for apptainer binary...
[2026-03-24 23:31:28] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 23:31:28] apptainer is not installed, using version from CVMFS
[2026-03-24 23:31:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 23:31:28] WARNING: Environment variable TMPDIR already has value [/tmp/job_11388629/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node221
[2026-03-24 23:31:28] apptainer works
[2026-03-24 23:31:28] Set ATHENA_PROC_NUMBER=8
[2026-03-24 23:31:28] Set ATHENA_CORE_NUMBER=8
[2026-03-24 23:31:28] Starting ATLAS job with PandaID=7056961611
[2026-03-24 23:31:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11388629/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 01:28:01]  *** The last 200 lines of the pilot log: ***
[2026-03-25 01:28:01] 2026-03-25 00:27:30,278 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,278 | INFO     | log transfer has been attempted: DONE
[2026-03-25 01:28:01] 2026-03-25 00:27:30,278 | INFO     | job 7056961611 has finished - writing final server update
[2026-03-25 01:28:01] 2026-03-25 00:27:30,278 | INFO     | total number of processed events: 400 (read)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,295 | INFO     | using path: /tmp/job_11388629/atlas/pilot/slots/0/PanDA_Pilot-7056961611/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,296 | INFO     | extracted standard info from prmon json
[2026-03-25 01:28:01] 2026-03-25 00:27:30,296 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 01:28:01] 2026-03-25 00:27:30,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 01:28:01] 2026-03-25 00:27:30,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 01:28:01] 2026-03-25 00:27:30,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 01:28:01] 2026-03-25 00:27:30,297 | INFO     | fitting pss+swap vs Time
[2026-03-25 01:28:01] 2026-03-25 00:27:30,297 | INFO     | sum of square deviations: 459366752.5
[2026-03-25 01:28:01] 2026-03-25 00:27:30,297 | INFO     | sum of deviations: 50279306059.00001
[2026-03-25 01:28:01] 2026-03-25 00:27:30,297 | INFO     | mean x: 1774394959.5
[2026-03-25 01:28:01] 2026-03-25 00:27:30,297 | INFO     | mean y: 2397451.50877193
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | intersect: -194211369114.55856
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | chi2: 6.190185660297147
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | sum of square deviations: 401533110.0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | sum of deviations: 47875456245.0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | mean x: 1774394807.0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | mean y: 2391109.376146789
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | intersect: -211561633944.20837
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | chi2: 6.222344556298705
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | current chi2=6.222344556298705 (change=-0.5195142402241691 %)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | right removable region: 108
[2026-03-25 01:28:01] 2026-03-25 00:27:30,298 | INFO     | sum of square deviations: 401533110.0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | sum of deviations: 10464865309.000002
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | mean x: 1774395112.0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | mean y: 2502435.7981651374
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | intersect: -46242266400.39562
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | chi2: 0.7582063562158277
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | current chi2=0.7582063562158277 (change=87.75147632358039 %)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | sum of square deviations: 348769330.0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | sum of deviations: -889369141.9999999
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | mean x: 1774395264.5
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | mean y: 2534528.6346153845
[2026-03-25 01:28:01] 2026-03-25 00:27:30,299 | INFO     | intersect: 4527279849.437989
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | chi2: 0.0043859147509697416
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | current chi2=0.0043859147509697416 (change=99.42154075668007 %)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | sum of square deviations: 300842850.0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | sum of deviations: -1203499500.0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | mean x: 1774395417.0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | mean y: 2535506.8282828284
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | intersect: 7100872718.970075
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | chi2: 0.003455767657309889
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | current chi2=0.003455767657309889 (change=21.207596282034295 %)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | left removable region: 30
[2026-03-25 01:28:01] 2026-03-25 00:27:30,300 | INFO     | sum of square deviations: 147126479.5
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | sum of deviations: -149930771.50000015
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | mean x: 1774395691.5
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | mean y: 2530545.217948718
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | intersect: 1810746957.9057224
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | chi2: 0.0020707906701816917
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | current memory leak: -1.02 B/s (using 78 data points, chi2=0.00)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | could have reported an average CPU frequency of 2364 MHz (7 samples)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | ..............................
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | . Timing measurements:
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | . get job = 0 s
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | . initial setup = 2 s
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | . payload setup = 3 s
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | . stage-in = 0 s
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | . payload execution = 6931 s
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | . stage-out = 0 s
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | . log creation = 0 s
[2026-03-25 01:28:01] 2026-03-25 00:27:30,301 | INFO     | ..............................
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | 
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | job summary report
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | --------------------------------------------------
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | PanDA job id: 7056961611
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | task id: 49180110
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | errors: (none)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | pilot state: finished 
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | transexitcode: 0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | exeerrorcode: 0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | exeerrordiag: 
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | exitcode: 0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | exitmsg: OK
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | cpuconsumptiontime: 48903 s
[2026-03-25 01:28:01] 2026-03-25 00:27:30,347 | INFO     | nevents: 400
[2026-03-25 01:28:01] 2026-03-25 00:27:30,348 | INFO     | neventsw: 0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,348 | INFO     | pid: 10303
[2026-03-25 01:28:01] 2026-03-25 00:27:30,348 | INFO     | pgrp: 10303
[2026-03-25 01:28:01] 2026-03-25 00:27:30,348 | INFO     | corecount: 8
[2026-03-25 01:28:01] 2026-03-25 00:27:30,348 | INFO     | event service: False
[2026-03-25 01:28:01] 2026-03-25 00:27:30,348 | INFO     | sizes: {0: 2279856, 1: 2280428, 11: 2280428, 6939: 2307681, 6940: 2316709, 6942: 2316765, 6944: 2317087}
[2026-03-25 01:28:01] 2026-03-25 00:27:30,348 | INFO     | --------------------------------------------------
[2026-03-25 01:28:01] 2026-03-25 00:27:30,348 | INFO     | 
[2026-03-25 01:28:01] 2026-03-25 00:27:30,348 | INFO     | executing command: ls -lF /tmp/job_11388629/atlas/pilot/slots/0
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,357 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,357 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 01:28:01] 2026-03-25 00:27:30,357 | INFO     | job 7056961611 has completed (purged errors)
[2026-03-25 01:28:01] 2026-03-25 00:27:30,357 | INFO     | overall cleanup function is called
[2026-03-25 01:28:01] 2026-03-25 00:27:31,363 | INFO     | --- collectZombieJob: --- 10, [10303]
[2026-03-25 01:28:01] 2026-03-25 00:27:31,363 | INFO     | zombie collector waiting for pid 10303
[2026-03-25 01:28:01] 2026-03-25 00:27:31,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 01:28:01] 2026-03-25 00:27:31,363 | INFO     | collected zombie processes
[2026-03-25 01:28:01] 2026-03-25 00:27:31,363 | INFO     | will attempt to kill all subprocesses of pid=10303
[2026-03-25 01:28:01] 2026-03-25 00:27:31,467 | INFO     | process IDs to be killed: [10303] (in reverse order)
[2026-03-25 01:28:01] 2026-03-25 00:27:31,502 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 01:28:01] 2026-03-25 00:27:31,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 01:28:01] 2026-03-25 00:27:31,506 | INFO     | did not find any defunct processes belonging to 10303
[2026-03-25 01:28:01] 2026-03-25 00:27:31,510 | INFO     | did not find any defunct processes belonging to 10303
[2026-03-25 01:28:01] 2026-03-25 00:27:31,510 | INFO     | ready for new job
[2026-03-25 01:28:01] 2026-03-25 00:27:31,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 01:28:01] 2026-03-25 00:27:31,510 | INFO     | **************************************
[2026-03-25 01:28:01] 2026-03-25 00:27:31,511 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 01:28:01] 2026-03-25 00:27:31,511 | INFO     | **************************************
[2026-03-25 01:28:01] 2026-03-25 00:27:31,511 | INFO     | 
[2026-03-25 01:28:01] 2026-03-25 00:27:31,524 | INFO     | architecture information:
[2026-03-25 01:28:01] 2026-03-25 00:27:31,524 | INFO     | executing command: cat /etc/os-release
[2026-03-25 01:28:01] 2026-03-25 00:27:31,530 | INFO     | cat /etc/os-release:
[2026-03-25 01:28:01] NAME="CentOS Linux"
[2026-03-25 01:28:01] VERSION="7 (Core)"
[2026-03-25 01:28:01] ID="centos"
[2026-03-25 01:28:01] ID_LIKE="rhel fedora"
[2026-03-25 01:28:01] VERSION_ID="7"
[2026-03-25 01:28:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 01:28:01] ANSI_COLOR="0;31"
[2026-03-25 01:28:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 01:28:01] HOME_URL="https://www.centos.org/"
[2026-03-25 01:28:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 01:28:01] 
[2026-03-25 01:28:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 01:28:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 01:28:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 01:28:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 01:28:01] 
[2026-03-25 01:28:01] 2026-03-25 00:27:31,530 | INFO     | **************************************
[2026-03-25 01:28:01] 2026-03-25 00:27:32,033 | INFO     | executing command: df -mP /tmp/job_11388629/atlas/pilot/slots/0
[2026-03-25 01:28:01] 2026-03-25 00:27:32,039 | INFO     | sufficient remaining disk space (223338299392 B)
[2026-03-25 01:28:01] 2026-03-25 00:27:32,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 01:28:01] 2026-03-25 00:27:32,039 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 01:28:01] 2026-03-25 00:27:32,039 | INFO     | update_server=False
[2026-03-25 01:28:01] 2026-03-25 00:27:32,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 01:28:01] 2026-03-25 00:27:32,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:28:01] 2026-03-25 00:27:32,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:28:01] 2026-03-25 00:27:32,039 | INFO     | aborting loop
[2026-03-25 01:28:01] 2026-03-25 00:27:32,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 01:28:01] 2026-03-25 00:27:32,494 | INFO     | all job control threads have been joined
[2026-03-25 01:28:01] 2026-03-25 00:27:32,889 | INFO     | all payload control threads have been joined
[2026-03-25 01:28:01] 2026-03-25 00:27:33,044 | INFO     | [job] retrieve thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:33,044 | INFO     | [job] queue monitor thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:33,044 | INFO     | [job] job monitor thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:33,096 | INFO     | all data control threads have been joined
[2026-03-25 01:28:01] 2026-03-25 00:27:33,194 | INFO     | [payload] validate_post thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:33,413 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:33,499 | INFO     | [job] control thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:33,764 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:33,867 | INFO     | [payload] failed_post thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:33,894 | INFO     | [payload] control thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:34,059 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:34,096 | INFO     | [data] control thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:34,125 | INFO     | [data] copytool_in thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:34,177 | INFO     | [job] validate thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:34,217 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:34,318 | INFO     | [data] copytool_out thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:34,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 01:28:01] 2026-03-25 00:27:38,656 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 01:28:01] 2026-03-25 00:27:46,581 | INFO     | [monitor] cgroup control has ended
[2026-03-25 01:28:01] 2026-03-25 00:27:46,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058988288)>']
[2026-03-25 01:28:01] 2026-03-25 00:27:51,974 | INFO     | all workflow threads have been joined
[2026-03-25 01:28:01] 2026-03-25 00:27:51,975 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 01:28:01] 2026-03-25 00:27:51,975 | INFO     | traces error code: 0
[2026-03-25 01:28:01] 2026-03-25 00:27:51,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 01:28:01] 2026-03-25 00:28:01,791 | INFO     | PID=31796 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 01:28:01] 2026-03-25 00:28:01,791 | INFO     | .. there are 5 such processes running
[2026-03-25 01:28:01] 2026-03-25 00:28:01,791 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 01:28:01] 2026-03-25 00:28:01,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 01:28:01] 2026-03-25 00:28:01,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 01:28:01] 2026-03-25 00:28:01,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 01:28:01] 2026-03-25 00:28:01,791 | INFO     | [monitor] control thread has ended
[2026-03-25 01:28:01] 2026-03-25 00:28:01,842 [wrapper] ==== pilot stdout END ====
[2026-03-25 01:28:01] 2026-03-25 00:28:01,843 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 01:28:01] 2026-03-25 00:28:01,844 [wrapper] pilotpid: 31796
[2026-03-25 01:28:01] 2026-03-25 00:28:01,845 [wrapper] Pilot exit status: 0
[2026-03-25 01:28:01] 2026-03-25 00:28:01,848 [wrapper] pandaids: 7056961611
[2026-03-25 01:28:01] 2026-03-25 00:28:01,871 [wrapper] cleanup supervisor_pilot 26468 31797
[2026-03-25 01:28:01] 2026-03-25 00:28:01,872 [wrapper] Test setup, not cleaning
[2026-03-25 01:28:01] 2026-03-25 00:28:01,873 [wrapper] apfmon messages muted
[2026-03-25 01:28:01] 2026-03-25 00:28:01,874 [wrapper] ==== wrapper stdout END ====
[2026-03-25 01:28:01] 2026-03-25 00:28:01,875 [wrapper] ==== wrapper stderr END ====
[2026-03-25 01:28:01]  *** Error codes and diagnostics ***
[2026-03-25 01:28:01]     "exeErrorCode": 0,
[2026-03-25 01:28:01]     "exeErrorDiag": "",
[2026-03-25 01:28:01]     "pilotErrorCode": 0,
[2026-03-25 01:28:01]     "pilotErrorDiag": "",
[2026-03-25 01:28:01]  *** Listing of results directory ***
[2026-03-25 01:28:01] total 481508
[2026-03-25 01:28:01] -rwx------ 1 mf493845 unix-user     36322 Mar 16 17:00 runpilot2-wrapper.sh
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user    585013 Mar 16 17:03 pilot3.tar.gz
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user      5111 Mar 16 17:04 queuedata.json
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user       100 Mar 24 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 01:28:01] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 22:28 run_atlas
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user       105 Mar 24 22:28 job.xml
[2026-03-25 01:28:01] -rw-r--r-- 2 mf493845 unix-user 246569595 Mar 24 23:31 EVNT.49132718._000027.pool.root.1
[2026-03-25 01:28:01] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:31 start_atlas.sh
[2026-03-25 01:28:01] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 23:31 shared
[2026-03-25 01:28:01] -rw-r--r-- 2 mf493845 unix-user    597540 Mar 24 23:31 input.tar.gz
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user      6389 Mar 24 23:31 init_data.xml
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user         0 Mar 24 23:31 boinc_setup_complete
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user      8192 Mar 24 23:31 boinc_mmap_file
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user         0 Mar 24 23:31 boinc_lockfile
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user      2592 Mar 24 23:31 pandaJob.out
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user   1010852 Mar 24 23:31 agis_schedconf.cvmfs.json
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user   1511579 Mar 24 23:31 agis_ddmendpoints.agis.ALL.json
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user       416 Mar 24 23:31 workernode_map.json
[2026-03-25 01:28:01] drwx------ 5 mf493845 unix-user       440 Mar 24 23:31 pilot3
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user 239800483 Mar 25 01:26 HITS.49180110._000319.pool.root.1
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user        95 Mar 25 01:27 pilot_heartbeat.json
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user      1015 Mar 25 01:27 memory_monitor_summary.json
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user    364311 Mar 25 01:27 log.49180110._000319.job.log.tgz.1
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user      6304 Mar 25 01:27 heartbeat.json
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user       820 Mar 25 01:28 pilotlog.txt
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user   1026360 Mar 25 01:28 log.49180110._000319.job.log.1
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user       357 Mar 25 01:28 output.list
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user       620 Mar 25 01:28 runtime_log
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user   1413120 Mar 25 01:28 result.tar.gz
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user      9219 Mar 25 01:28 runtime_log.err
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user       644 Mar 25 01:28 aoJLDmHYPM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmeLyLDm1278Vm.diag
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user     21530 Mar 25 01:28 stderr.txt
[2026-03-25 01:28:01] HITS file was successfully produced:
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user 239800483 Mar 25 01:26 shared/HITS.pool.root.1
[2026-03-25 01:28:01]  *** Contents of shared directory: ***
[2026-03-25 01:28:01] total 476956
[2026-03-25 01:28:01] -rw-r--r-- 2 mf493845 unix-user 246569595 Mar 24 23:31 ATLAS.root_0
[2026-03-25 01:28:01] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:31 start_atlas.sh
[2026-03-25 01:28:01] -rw-r--r-- 2 mf493845 unix-user    597540 Mar 24 23:31 input.tar.gz
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user 239800483 Mar 25 01:26 HITS.pool.root.1
[2026-03-25 01:28:01] -rw------- 1 mf493845 unix-user   1413120 Mar 25 01:28 result.tar.gz
01:28:03 (28000): run_atlas exited; CPU time 49011.515924
01:28:03 (28000): called boinc_finish(0)

</stderr_txt>
]]>

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