Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:05:11 (30758): wrapper (7.7.26015): starting
21:05:11 (30758): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 21:05:11] Arguments: --nthreads 8
[2026-03-24 21:05:11] Threads: 8
[2026-03-24 21:05:11] Checking for CVMFS
[2026-03-24 21:05:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 21:05:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 21:05:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 21:05:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 21:05:12] 2.11.0.0 4041 236466 91864 157655 2 188 3020138 4096000 3659 130560 5 14641273 99.506 15429622 438 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 21:05:12] CVMFS is ok
[2026-03-24 21:05:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 21:05:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 21:05:12] Further information can be found at the LHC@home message board.
[2026-03-24 21:05:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 21:05:12] Checking for apptainer binary...
[2026-03-24 21:05:12] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 21:05:12] apptainer is not installed, using version from CVMFS
[2026-03-24 21:05:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 21:05:12] WARNING: Environment variable TMPDIR already has value [/tmp/job_11387604/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node368
[2026-03-24 21:05:12] apptainer works
[2026-03-24 21:05:12] Set ATHENA_PROC_NUMBER=8
[2026-03-24 21:05:12] Set ATHENA_CORE_NUMBER=8
[2026-03-24 21:05:12] Starting ATLAS job with PandaID=7056942407
[2026-03-24 21:05:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11387604/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 23:12:36]  *** The last 200 lines of the pilot log: ***
[2026-03-24 23:12:36] 2026-03-24 22:11:39,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 23:12:36] 2026-03-24 22:11:39,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 23:12:36] 2026-03-24 22:11:39,970 | INFO     | fitting pss+swap vs Time
[2026-03-24 23:12:36] 2026-03-24 22:11:39,971 | INFO     | sum of square deviations: 591173875.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,971 | INFO     | sum of deviations: 16086905390.5
[2026-03-24 23:12:36] 2026-03-24 22:11:39,971 | INFO     | mean x: 1774386486.5
[2026-03-24 23:12:36] 2026-03-24 22:11:39,971 | INFO     | mean y: 2504223.2338709678
[2026-03-24 23:12:36] 2026-03-24 22:11:39,971 | INFO     | intersect: -48281746386.63485
[2026-03-24 23:12:36] 2026-03-24 22:11:39,971 | INFO     | chi2: 1.1394667962322034
[2026-03-24 23:12:36] 2026-03-24 22:11:39,971 | INFO     | sum of square deviations: 522502820.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | sum of deviations: 15001977355.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | mean x: 1774386334.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | mean y: 2501812.5966386553
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | intersect: -50943258827.87122
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | chi2: 1.1409654105324152
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | current chi2=1.1409654105324152 (change=-0.13151890912198355 %)
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | right removable region: 118
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | sum of square deviations: 522502820.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | sum of deviations: 1674292498.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | mean x: 1774386639.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | mean y: 2535507.4537815126
[2026-03-24 23:12:36] 2026-03-24 22:11:39,972 | INFO     | intersect: -5683256271.103766
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | chi2: 0.004591881268732106
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | current chi2=0.004591881268732106 (change=99.5970149122453 %)
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | sum of square deviations: 459366752.5
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | sum of deviations: 2380725446.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | mean x: 1774386791.5
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | mean y: 2533787.1754385964
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | intersect: -9193446902.720806
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | chi2: 0.0021134635957088203
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | current chi2=0.0021134635957088203 (change=53.97390585640333 %)
[2026-03-24 23:12:36] 2026-03-24 22:11:39,973 | INFO     | sum of square deviations: 401533110.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | sum of deviations: 2274635893.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | mean x: 1774386944.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | mean y: 2534100.779816514
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | intersect: -10049150630.50668
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | chi2: 0.0005403192269950653
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | current chi2=0.0005403192269950653 (change=74.43441996861786 %)
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | sum of square deviations: 348769330.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | sum of deviations: 1893804200.5000002
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | mean x: 1774387096.5
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | mean y: 2535200.7403846155
[2026-03-24 23:12:36] 2026-03-24 22:11:39,974 | INFO     | intersect: -9632319265.00263
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | chi2: 0.0005165286006337783
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | current chi2=0.0005165286006337783 (change=4.403068625485766 %)
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | left removable region: 40
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | sum of square deviations: 147126479.5
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | sum of deviations: 559305706.0
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | mean x: 1774387523.5
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | mean y: 2536955.3846153845
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | intersect: -6742850210.280278
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | chi2: 0.00021762623851705193
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | current memory leak: 3.80 B/s (using 78 data points, chi2=0.00)
[2026-03-24 23:12:36] 2026-03-24 22:11:39,975 | INFO     | could have reported an average CPU frequency of 2847 MHz (8 samples)
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | ..............................
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | . Timing measurements:
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | . get job = 0 s
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | . initial setup = 2 s
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | . payload setup = 3 s
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | . stage-in = 0 s
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | . payload execution = 7558 s
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | . stage-out = 0 s
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | . log creation = 0 s
[2026-03-24 23:12:36] 2026-03-24 22:11:39,976 | INFO     | ..............................
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | 
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | job summary report
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | --------------------------------------------------
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | PanDA job id: 7056942407
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | task id: 49178731
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | errors: (none)
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | pilot state: finished 
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | transexitcode: 0
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | exeerrorcode: 0
[2026-03-24 23:12:36] 2026-03-24 22:11:40,200 | INFO     | exeerrordiag: 
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | exitcode: 0
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | exitmsg: OK
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | cpuconsumptiontime: 56708 s
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | nevents: 400
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | neventsw: 0
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | pid: 9081
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | pgrp: 9081
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | corecount: 8
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | event service: False
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | sizes: {0: 2280420, 11: 2280420, 7564: 2308174, 7565: 2317202, 7569: 2317258, 7570: 2317452}
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | --------------------------------------------------
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | 
[2026-03-24 23:12:36] 2026-03-24 22:11:40,201 | INFO     | executing command: ls -lF /tmp/job_11387604/atlas/pilot/slots/0
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,211 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 23:12:36] 2026-03-24 22:11:40,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,212 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 23:12:36] 2026-03-24 22:11:40,212 | INFO     | job 7056942407 has completed (purged errors)
[2026-03-24 23:12:36] 2026-03-24 22:11:40,212 | INFO     | overall cleanup function is called
[2026-03-24 23:12:36] 2026-03-24 22:11:41,217 | INFO     | --- collectZombieJob: --- 10, [9081]
[2026-03-24 23:12:36] 2026-03-24 22:11:41,218 | INFO     | zombie collector waiting for pid 9081
[2026-03-24 23:12:36] 2026-03-24 22:11:41,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 23:12:36] 2026-03-24 22:11:41,218 | INFO     | collected zombie processes
[2026-03-24 23:12:36] 2026-03-24 22:11:41,218 | INFO     | will attempt to kill all subprocesses of pid=9081
[2026-03-24 23:12:36] 2026-03-24 22:11:41,318 | INFO     | process IDs to be killed: [9081] (in reverse order)
[2026-03-24 23:12:36] 2026-03-24 22:11:41,351 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 23:12:36] 2026-03-24 22:11:41,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 23:12:36] 2026-03-24 22:11:41,355 | INFO     | did not find any defunct processes belonging to 9081
[2026-03-24 23:12:36] 2026-03-24 22:11:41,358 | INFO     | did not find any defunct processes belonging to 9081
[2026-03-24 23:12:36] 2026-03-24 22:11:41,358 | INFO     | ready for new job
[2026-03-24 23:12:36] 2026-03-24 22:11:41,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 23:12:36] 2026-03-24 22:11:41,359 | INFO     | **************************************
[2026-03-24 23:12:36] 2026-03-24 22:11:41,359 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 23:12:36] 2026-03-24 22:11:41,359 | INFO     | **************************************
[2026-03-24 23:12:36] 2026-03-24 22:11:41,359 | INFO     | 
[2026-03-24 23:12:36] 2026-03-24 22:11:41,373 | INFO     | architecture information:
[2026-03-24 23:12:36] 2026-03-24 22:11:41,373 | INFO     | executing command: cat /etc/os-release
[2026-03-24 23:12:36] 2026-03-24 22:11:41,379 | INFO     | cat /etc/os-release:
[2026-03-24 23:12:36] NAME="CentOS Linux"
[2026-03-24 23:12:36] VERSION="7 (Core)"
[2026-03-24 23:12:36] ID="centos"
[2026-03-24 23:12:36] ID_LIKE="rhel fedora"
[2026-03-24 23:12:36] VERSION_ID="7"
[2026-03-24 23:12:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 23:12:36] ANSI_COLOR="0;31"
[2026-03-24 23:12:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 23:12:36] HOME_URL="https://www.centos.org/"
[2026-03-24 23:12:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 23:12:36] 
[2026-03-24 23:12:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 23:12:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 23:12:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 23:12:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 23:12:36] 
[2026-03-24 23:12:36] 2026-03-24 22:11:41,379 | INFO     | **************************************
[2026-03-24 23:12:36] 2026-03-24 22:11:41,882 | INFO     | executing command: df -mP /tmp/job_11387604/atlas/pilot/slots/0
[2026-03-24 23:12:36] 2026-03-24 22:11:41,887 | INFO     | sufficient remaining disk space (226262777856 B)
[2026-03-24 23:12:36] 2026-03-24 22:11:41,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 23:12:36] 2026-03-24 22:11:41,888 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 23:12:36] 2026-03-24 22:11:41,888 | INFO     | update_server=False
[2026-03-24 23:12:36] 2026-03-24 22:11:41,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 23:12:36] 2026-03-24 22:11:41,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 23:12:36] 2026-03-24 22:11:41,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 23:12:36] 2026-03-24 22:11:41,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 23:12:36] 2026-03-24 22:11:41,975 | INFO     | aborting loop
[2026-03-24 23:12:36] 2026-03-24 22:11:42,032 | INFO     | all payload control threads have been joined
[2026-03-24 23:12:36] 2026-03-24 22:11:42,133 | INFO     | all data control threads have been joined
[2026-03-24 23:12:36] 2026-03-24 22:11:42,873 | INFO     | all job control threads have been joined
[2026-03-24 23:12:36] 2026-03-24 22:11:42,893 | INFO     | [job] retrieve thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:42,893 | INFO     | [job] queue monitor thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:42,980 | INFO     | [job] job monitor thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:43,037 | INFO     | [payload] control thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:43,138 | INFO     | [data] control thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:43,157 | INFO     | [payload] validate_post thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:43,199 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:43,878 | INFO     | [job] control thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:43,893 | INFO     | [data] copytool_out thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:44,090 | INFO     | [job] validate thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:44,110 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:44,152 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:44,317 | INFO     | [payload] failed_post thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:44,317 | INFO     | [data] copytool_in thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:45,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 23:12:36] 2026-03-24 22:11:49,074 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:11:52,477 | INFO     | job.realtimelogging is not enabled
[2026-03-24 23:12:36] 2026-03-24 22:11:53,482 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 23:12:36] 2026-03-24 22:12:12,937 | INFO     | PID=3289 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-24 23:12:36] 2026-03-24 22:12:12,937 | INFO     | .. there are 2 such processes running
[2026-03-24 23:12:36] 2026-03-24 22:12:12,937 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 23:12:36] 2026-03-24 22:12:12,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 23:12:36] 2026-03-24 22:12:12,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 23:12:36] 2026-03-24 22:12:30,578 | INFO     | [monitor] cgroup control has ended
[2026-03-24 23:12:36] 2026-03-24 22:12:30,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-24 23:12:36] 2026-03-24 22:12:31,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 23:12:36] 2026-03-24 22:12:31,026 | INFO     | [monitor] control thread has ended
[2026-03-24 23:12:36] 2026-03-24 22:12:35,853 | INFO     | all workflow threads have been joined
[2026-03-24 23:12:36] 2026-03-24 22:12:35,853 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 23:12:36] 2026-03-24 22:12:35,853 | INFO     | traces error code: 0
[2026-03-24 23:12:36] 2026-03-24 22:12:35,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 23:12:36] 2026-03-24 22:12:35,909 [wrapper] ==== pilot stdout END ====
[2026-03-24 23:12:36] 2026-03-24 22:12:35,910 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 23:12:36] 2026-03-24 22:12:35,912 [wrapper] pilotpid: 3289
[2026-03-24 23:12:36] 2026-03-24 22:12:35,913 [wrapper] Pilot exit status: 0
[2026-03-24 23:12:36] 2026-03-24 22:12:35,917 [wrapper] pandaids: 7056942407
[2026-03-24 23:12:36] 2026-03-24 22:12:35,939 [wrapper] cleanup supervisor_pilot 25067 3290
[2026-03-24 23:12:36] 2026-03-24 22:12:35,940 [wrapper] Test setup, not cleaning
[2026-03-24 23:12:36] 2026-03-24 22:12:35,942 [wrapper] apfmon messages muted
[2026-03-24 23:12:36] 2026-03-24 22:12:35,943 [wrapper] ==== wrapper stdout END ====
[2026-03-24 23:12:36] 2026-03-24 22:12:35,944 [wrapper] ==== wrapper stderr END ====
[2026-03-24 23:12:36]  *** Error codes and diagnostics ***
[2026-03-24 23:12:36]     "exeErrorCode": 0,
[2026-03-24 23:12:36]     "exeErrorDiag": "",
[2026-03-24 23:12:36]     "pilotErrorCode": 0,
[2026-03-24 23:12:36]     "pilotErrorDiag": "",
[2026-03-24 23:12:36]  *** Listing of results directory ***
[2026-03-24 23:12:36] total 481052
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user    585013 Mar 16 15:05 pilot3.tar.gz
[2026-03-24 23:12:36] -rwx------ 1 mf493845 unix-user     36322 Mar 16 15:05 runpilot2-wrapper.sh
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user      5111 Mar 16 15:05 queuedata.json
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user       100 Mar 24 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 23:12:36] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 20:03 run_atlas
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user       105 Mar 24 20:03 job.xml
[2026-03-24 23:12:36] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 21:05 start_atlas.sh
[2026-03-24 23:12:36] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 21:05 shared
[2026-03-24 23:12:36] -rw-r--r-- 2 mf493845 unix-user    597526 Mar 24 21:05 input.tar.gz
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user      6390 Mar 24 21:05 init_data.xml
[2026-03-24 23:12:36] -rw-r--r-- 2 mf493845 unix-user 241483994 Mar 24 21:05 EVNT.49129589._000008.pool.root.1
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user         0 Mar 24 21:05 boinc_setup_complete
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user      8192 Mar 24 21:05 boinc_mmap_file
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user         0 Mar 24 21:05 boinc_lockfile
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user      2607 Mar 24 21:05 pandaJob.out
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user   1010852 Mar 24 21:05 agis_schedconf.cvmfs.json
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user   1511579 Mar 24 21:05 agis_ddmendpoints.agis.ALL.json
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user       415 Mar 24 21:05 workernode_map.json
[2026-03-24 23:12:36] drwx------ 5 mf493845 unix-user       440 Mar 24 21:05 pilot3
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user 244263406 Mar 24 23:11 HITS.49178731._000180.pool.root.1
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user      1021 Mar 24 23:11 memory_monitor_summary.json
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user    360111 Mar 24 23:11 log.49178731._000180.job.log.tgz.1
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user      6306 Mar 24 23:11 heartbeat.json
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user        95 Mar 24 23:12 pilot_heartbeat.json
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user      4902 Mar 24 23:12 pilotlog.txt
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user   1108938 Mar 24 23:12 log.49178731._000180.job.log.1
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user       357 Mar 24 23:12 output.list
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user       620 Mar 24 23:12 runtime_log
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user   1484800 Mar 24 23:12 result.tar.gz
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user      9219 Mar 24 23:12 runtime_log.err
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user       644 Mar 24 23:12 cIaLDmQkNM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkHuLDmGLnD8m.diag
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user     21309 Mar 24 23:12 stderr.txt
[2026-03-24 23:12:36] HITS file was successfully produced:
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user 244263406 Mar 24 23:11 shared/HITS.pool.root.1
[2026-03-24 23:12:36]  *** Contents of shared directory: ***
[2026-03-24 23:12:36] total 476420
[2026-03-24 23:12:36] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 21:05 start_atlas.sh
[2026-03-24 23:12:36] -rw-r--r-- 2 mf493845 unix-user    597526 Mar 24 21:05 input.tar.gz
[2026-03-24 23:12:36] -rw-r--r-- 2 mf493845 unix-user 241483994 Mar 24 21:05 ATLAS.root_0
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user 244263406 Mar 24 23:11 HITS.pool.root.1
[2026-03-24 23:12:36] -rw------- 1 mf493845 unix-user   1484800 Mar 24 23:12 result.tar.gz
23:12:37 (30758): run_atlas exited; CPU time 56823.242912
23:12:37 (30758): called boinc_finish(0)

</stderr_txt>
]]>

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