Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:04:36 (19943): wrapper (7.7.26015): starting
23:04:36 (19943): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 23:04:36] Arguments: --nthreads 8
[2026-03-24 23:04:36] Threads: 8
[2026-03-24 23:04:36] Checking for CVMFS
[2026-03-24 23:04:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 23:04:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 23:04:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 23:04:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 23:04:36] 2.11.0.0 4936 236051 106052 157658 1 188 2995358 4096000 4585 130560 3 27595912 99.651 17754315 459 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 23:04:36] CVMFS is ok
[2026-03-24 23:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 23:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 23:04:36] Further information can be found at the LHC@home message board.
[2026-03-24 23:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 23:04:36] Checking for apptainer binary...
[2026-03-24 23:04:36] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 23:04:36] apptainer is not installed, using version from CVMFS
[2026-03-24 23:04:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 23:04:37] WARNING: Environment variable TMPDIR already has value [/tmp/job_11388392/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node008
[2026-03-24 23:04:37] apptainer works
[2026-03-24 23:04:37] Set ATHENA_PROC_NUMBER=8
[2026-03-24 23:04:37] Set ATHENA_CORE_NUMBER=8
[2026-03-24 23:04:37] Starting ATLAS job with PandaID=7056962433
[2026-03-24 23:04:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11388392/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 00:59:02]  *** The last 200 lines of the pilot log: ***
[2026-03-25 00:59:02] 2026-03-24 23:58:24,369 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 00:59:02] 2026-03-24 23:58:24,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 00:59:02] 2026-03-24 23:58:24,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 00:59:02] 2026-03-24 23:58:24,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 00:59:02] 2026-03-24 23:58:24,370 | INFO     | fitting pss+swap vs Time
[2026-03-25 00:59:02] 2026-03-24 23:58:24,370 | INFO     | sum of square deviations: 435610028.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,371 | INFO     | sum of deviations: 14375936520.5
[2026-03-25 00:59:02] 2026-03-24 23:58:24,371 | INFO     | mean x: 1774393288.5
[2026-03-25 00:59:02] 2026-03-24 23:58:24,371 | INFO     | mean y: 2490084.1160714286
[2026-03-25 00:59:02] 2026-03-24 23:58:24,371 | INFO     | intersect: -58555769915.07119
[2026-03-25 00:59:02] 2026-03-24 23:58:24,371 | INFO     | chi2: 1.1492138824264835
[2026-03-25 00:59:02] 2026-03-24 23:58:24,371 | INFO     | sum of square deviations: 379832238.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | sum of deviations: 13303769074.999998
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | mean x: 1774393136.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | mean y: 2487172.336448598
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | intersect: -62146309501.444214
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | chi2: 1.1505116037270804
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | current chi2=1.1505116037270804 (change=-0.11292252212067469 %)
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | right removable region: 106
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | sum of square deviations: 379832238.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | sum of deviations: 1129635942.0000002
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | mean x: 1774393441.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | mean y: 2525422.1028037383
[2026-03-25 00:59:02] 2026-03-24 23:58:24,372 | INFO     | intersect: -5274590119.107937
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | chi2: 0.0015479324431251899
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | current chi2=0.0015479324431251899 (change=99.86530510405454 %)
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | sum of square deviations: 329031285.5
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | sum of deviations: 1202946291.0000002
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | mean x: 1774393593.5
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | mean y: 2525206.0392156863
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | intersect: -6484700435.22883
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | chi2: 0.000975870673940724
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | current chi2=0.000975870673940724 (change=36.9565074835892 %)
[2026-03-25 00:59:02] 2026-03-24 23:58:24,373 | INFO     | sum of square deviations: 282974608.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | sum of deviations: 943996228.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | mean x: 1774393746.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | mean y: 2526056.1030927836
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | intersect: -5916807183.898392
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | chi2: 0.0009146409848578153
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | current chi2=0.0009146409848578153 (change=6.27436510984117 %)
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | left removable region: 30
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | sum of square deviations: 136095575.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | sum of deviations: 163534534.0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | mean x: 1774394020.5
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | mean y: 2526073.9210526315
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | intersect: -2129613044.3041646
[2026-03-25 00:59:02] 2026-03-24 23:58:24,374 | INFO     | chi2: 6.38145828355659e-05
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | current memory leak: 1.20 B/s (using 76 data points, chi2=0.00)
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | could have reported an average CPU frequency of 2558 MHz (7 samples)
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | ..............................
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | . Timing measurements:
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | . get job = 0 s
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | . initial setup = 3 s
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | . payload setup = 4 s
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | . stage-in = 0 s
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | . payload execution = 6796 s
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | . stage-out = 0 s
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | . log creation = 0 s
[2026-03-25 00:59:02] 2026-03-24 23:58:24,375 | INFO     | ..............................
[2026-03-25 00:59:02] 2026-03-24 23:58:24,425 | INFO     | 
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | job summary report
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | --------------------------------------------------
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | PanDA job id: 7056962433
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | task id: 49180262
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | errors: (none)
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | pilot state: finished 
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | transexitcode: 0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | exeerrorcode: 0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | exeerrordiag: 
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | exitcode: 0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | exitmsg: OK
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | cpuconsumptiontime: 49966 s
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | nevents: 400
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | neventsw: 0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | pid: 30494
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | pgrp: 30494
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | corecount: 8
[2026-03-25 00:59:02] 2026-03-24 23:58:24,426 | INFO     | event service: False
[2026-03-25 00:59:02] 2026-03-24 23:58:24,427 | INFO     | sizes: {0: 2280435, 10: 2280435, 6804: 2316751, 6807: 2316751, 6808: 2316945}
[2026-03-25 00:59:02] 2026-03-24 23:58:24,427 | INFO     | --------------------------------------------------
[2026-03-25 00:59:02] 2026-03-24 23:58:24,427 | INFO     | 
[2026-03-25 00:59:02] 2026-03-24 23:58:24,427 | INFO     | executing command: ls -lF /tmp/job_11388392/atlas/pilot/slots/0
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,442 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 00:59:02] 2026-03-24 23:58:24,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,442 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 00:59:02] 2026-03-24 23:58:24,442 | INFO     | job 7056962433 has completed (purged errors)
[2026-03-25 00:59:02] 2026-03-24 23:58:24,442 | INFO     | overall cleanup function is called
[2026-03-25 00:59:02] 2026-03-24 23:58:25,445 | INFO     | --- collectZombieJob: --- 10, [30494]
[2026-03-25 00:59:02] 2026-03-24 23:58:25,445 | INFO     | zombie collector waiting for pid 30494
[2026-03-25 00:59:02] 2026-03-24 23:58:25,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 00:59:02] 2026-03-24 23:58:25,445 | INFO     | collected zombie processes
[2026-03-25 00:59:02] 2026-03-24 23:58:25,446 | INFO     | will attempt to kill all subprocesses of pid=30494
[2026-03-25 00:59:02] 2026-03-24 23:58:25,499 | WARNING  | process 30494 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 00:59:02] 2026-03-24 23:58:25,787 | INFO     | using path: /tmp/job_11388392/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 00:59:02] 2026-03-24 23:58:25,806 | INFO     | process IDs to be killed: [30494] (in reverse order)
[2026-03-25 00:59:02] 2026-03-24 23:58:25,866 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 00:59:02] 2026-03-24 23:58:25,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 00:59:02] 2026-03-24 23:58:25,883 | INFO     | did not find any defunct processes belonging to 30494
[2026-03-25 00:59:02] 2026-03-24 23:58:25,897 | INFO     | did not find any defunct processes belonging to 30494
[2026-03-25 00:59:02] 2026-03-24 23:58:25,897 | INFO     | ready for new job
[2026-03-25 00:59:02] 2026-03-24 23:58:25,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 00:59:02] 2026-03-24 23:58:25,898 | INFO     | **************************************
[2026-03-25 00:59:02] 2026-03-24 23:58:25,898 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 00:59:02] 2026-03-24 23:58:25,898 | INFO     | **************************************
[2026-03-25 00:59:02] 2026-03-24 23:58:25,898 | INFO     | 
[2026-03-25 00:59:02] 2026-03-24 23:58:25,916 | INFO     | architecture information:
[2026-03-25 00:59:02] 2026-03-24 23:58:25,916 | INFO     | executing command: cat /etc/os-release
[2026-03-25 00:59:02] 2026-03-24 23:58:25,927 | INFO     | cat /etc/os-release:
[2026-03-25 00:59:02] NAME="CentOS Linux"
[2026-03-25 00:59:02] VERSION="7 (Core)"
[2026-03-25 00:59:02] ID="centos"
[2026-03-25 00:59:02] ID_LIKE="rhel fedora"
[2026-03-25 00:59:02] VERSION_ID="7"
[2026-03-25 00:59:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 00:59:02] ANSI_COLOR="0;31"
[2026-03-25 00:59:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 00:59:02] HOME_URL="https://www.centos.org/"
[2026-03-25 00:59:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 00:59:02] 
[2026-03-25 00:59:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 00:59:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 00:59:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 00:59:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 00:59:02] 
[2026-03-25 00:59:02] 2026-03-24 23:58:25,928 | INFO     | **************************************
[2026-03-25 00:59:02] 2026-03-24 23:58:26,004 | INFO     | number of running child processes to parent process 30494: 1
[2026-03-25 00:59:02] 2026-03-24 23:58:26,005 | INFO     | maximum number of monitored processes: 6
[2026-03-25 00:59:02] 2026-03-24 23:58:26,005 | INFO     | aborting job monitoring since job object (job id=7056962433) has expired
[2026-03-25 00:59:02] 2026-03-24 23:58:26,430 | INFO     | executing command: df -mP /tmp/job_11388392/atlas/pilot/slots/0
[2026-03-25 00:59:02] 2026-03-24 23:58:26,443 | INFO     | sufficient remaining disk space (223515508736 B)
[2026-03-25 00:59:02] 2026-03-24 23:58:26,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 00:59:02] 2026-03-24 23:58:26,443 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 00:59:02] 2026-03-24 23:58:26,443 | INFO     | update_server=False
[2026-03-25 00:59:02] 2026-03-24 23:58:26,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 00:59:02] 2026-03-24 23:58:26,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 00:59:02] 2026-03-24 23:58:26,444 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 00:59:02] 2026-03-24 23:58:26,444 | INFO     | will abort loop
[2026-03-25 00:59:02] 2026-03-24 23:58:26,496 | INFO     | all payload control threads have been joined
[2026-03-25 00:59:02] 2026-03-24 23:58:26,996 | INFO     | all data control threads have been joined
[2026-03-25 00:59:02] 2026-03-24 23:58:27,032 | INFO     | all job control threads have been joined
[2026-03-25 00:59:02] 2026-03-24 23:58:27,449 | INFO     | [job] retrieve thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:27,449 | INFO     | [job] job monitor thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:27,450 | INFO     | [job] validate thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:27,501 | INFO     | [payload] control thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:27,545 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:27,630 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:27,763 | INFO     | [payload] validate_post thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:28,001 | INFO     | [data] control thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:28,037 | INFO     | [job] control thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:28,449 | INFO     | [data] copytool_out thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:28,568 | INFO     | [data] copytool_in thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:28,733 | INFO     | [payload] failed_post thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:28,781 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:29,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 00:59:02] 2026-03-24 23:58:29,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 00:59:02] 2026-03-24 23:58:30,441 | INFO     | [job] queue monitor thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:33,570 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:37,407 | INFO     | job.realtimelogging is not enabled
[2026-03-25 00:59:02] 2026-03-24 23:58:38,412 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 00:59:02] 2026-03-24 23:58:55,679 | INFO     | [monitor] cgroup control has ended
[2026-03-25 00:59:02] 2026-03-24 23:58:56,332 | INFO     | PID=24859 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 00:59:02] 2026-03-24 23:58:56,333 | INFO     | .. there are 6 such processes running
[2026-03-25 00:59:02] 2026-03-24 23:58:56,333 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 00:59:02] 2026-03-24 23:58:56,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 00:59:02] 2026-03-24 23:58:56,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 00:59:02] 2026-03-24 23:58:57,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-25 00:59:02] 2026-03-24 23:58:58,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 00:59:02] 2026-03-24 23:58:58,343 | INFO     | [monitor] control thread has ended
[2026-03-25 00:59:02] 2026-03-24 23:59:02,533 | INFO     | all workflow threads have been joined
[2026-03-25 00:59:02] 2026-03-24 23:59:02,533 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 00:59:02] 2026-03-24 23:59:02,533 | INFO     | traces error code: 0
[2026-03-25 00:59:02] 2026-03-24 23:59:02,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 00:59:02] 2026-03-24 23:59:02,610 [wrapper] ==== pilot stdout END ====
[2026-03-25 00:59:02] 2026-03-24 23:59:02,611 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 00:59:02] 2026-03-24 23:59:02,613 [wrapper] pilotpid: 24859
[2026-03-25 00:59:02] 2026-03-24 23:59:02,614 [wrapper] Pilot exit status: 0
[2026-03-25 00:59:02] 2026-03-24 23:59:02,620 [wrapper] pandaids: 7056962433
[2026-03-25 00:59:02] 2026-03-24 23:59:02,659 [wrapper] cleanup supervisor_pilot 32609 24860
[2026-03-25 00:59:02] 2026-03-24 23:59:02,661 [wrapper] Test setup, not cleaning
[2026-03-25 00:59:02] 2026-03-24 23:59:02,662 [wrapper] apfmon messages muted
[2026-03-25 00:59:02] 2026-03-24 23:59:02,664 [wrapper] ==== wrapper stdout END ====
[2026-03-25 00:59:02] 2026-03-24 23:59:02,665 [wrapper] ==== wrapper stderr END ====
[2026-03-25 00:59:02]  *** Error codes and diagnostics ***
[2026-03-25 00:59:02]     "exeErrorCode": 0,
[2026-03-25 00:59:02]     "exeErrorDiag": "",
[2026-03-25 00:59:02]     "pilotErrorCode": 0,
[2026-03-25 00:59:02]     "pilotErrorDiag": "",
[2026-03-25 00:59:02]  *** Listing of results directory ***
[2026-03-25 00:59:02] total 459180
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user    585013 Mar 16 16:57 pilot3.tar.gz
[2026-03-25 00:59:02] -rwx------ 1 mf493845 unix-user     36322 Mar 16 16:58 runpilot2-wrapper.sh
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user      5111 Mar 16 16:58 queuedata.json
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user       100 Mar 24 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 00:59:02] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 22:04 run_atlas
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user       105 Mar 24 22:04 job.xml
[2026-03-25 00:59:02] -rw-r--r-- 2 mf493845 unix-user 236478319 Mar 24 23:04 EVNT.49132959._000002.pool.root.1
[2026-03-25 00:59:02] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:04 start_atlas.sh
[2026-03-25 00:59:02] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 23:04 shared
[2026-03-25 00:59:02] -rw-r--r-- 2 mf493845 unix-user    597538 Mar 24 23:04 input.tar.gz
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user      6387 Mar 24 23:04 init_data.xml
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user         0 Mar 24 23:04 boinc_setup_complete
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user      8192 Mar 24 23:04 boinc_mmap_file
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user         0 Mar 24 23:04 boinc_lockfile
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user      2618 Mar 24 23:04 pandaJob.out
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user   1010852 Mar 24 23:04 agis_schedconf.cvmfs.json
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user   1511579 Mar 24 23:04 agis_ddmendpoints.agis.ALL.json
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user       421 Mar 24 23:04 workernode_map.json
[2026-03-25 00:59:02] drwx------ 5 mf493845 unix-user       440 Mar 24 23:04 pilot3
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user 227122999 Mar 25 00:57 HITS.49180262._000037.pool.root.1
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user        95 Mar 25 00:58 pilot_heartbeat.json
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user      1017 Mar 25 00:58 memory_monitor_summary.json
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user    354512 Mar 25 00:58 log.49180262._000037.job.log.tgz.1
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user      6305 Mar 25 00:58 heartbeat.json
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user      5191 Mar 25 00:59 pilotlog.txt
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user    988544 Mar 25 00:59 log.49180262._000037.job.log.1
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user       357 Mar 25 00:59 output.list
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user       620 Mar 25 00:59 runtime_log
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user   1361920 Mar 25 00:59 result.tar.gz
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user      9219 Mar 25 00:59 runtime_log.err
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user       645 Mar 25 00:59 LabKDmcVPM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmV0uLDmK2Ppjm.diag
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user     21510 Mar 25 00:59 stderr.txt
[2026-03-25 00:59:02] HITS file was successfully produced:
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user 227122999 Mar 25 00:57 shared/HITS.pool.root.1
[2026-03-25 00:59:02]  *** Contents of shared directory: ***
[2026-03-25 00:59:02] total 454668
[2026-03-25 00:59:02] -rw-r--r-- 2 mf493845 unix-user 236478319 Mar 24 23:04 ATLAS.root_0
[2026-03-25 00:59:02] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:04 start_atlas.sh
[2026-03-25 00:59:02] -rw-r--r-- 2 mf493845 unix-user    597538 Mar 24 23:04 input.tar.gz
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user 227122999 Mar 25 00:57 HITS.pool.root.1
[2026-03-25 00:59:02] -rw------- 1 mf493845 unix-user   1361920 Mar 25 00:59 result.tar.gz
00:59:04 (19943): run_atlas exited; CPU time 50154.479292
00:59:04 (19943): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN