Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:27:39 (13489): wrapper (7.7.26015): starting
23:27:39 (13489): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 23:27:39] Arguments: --nthreads 8
[2026-03-24 23:27:39] Threads: 8
[2026-03-24 23:27:39] Checking for CVMFS
[2026-03-24 23:27:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 23:27:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 23:27:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 23:27:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 23:27:40] 2.11.0.0 5436 29492 60396 157660 3 188 2987165 4096001 6401 130560 0 2337224 99.417 2010819 256 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 23:27:40] CVMFS is ok
[2026-03-24 23:27:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 23:27:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 23:27:40] Further information can be found at the LHC@home message board.
[2026-03-24 23:27:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 23:27:40] Checking for apptainer binary...
[2026-03-24 23:27:40] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 23:27:40] apptainer is not installed, using version from CVMFS
[2026-03-24 23:27:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 23:27:40] WARNING: Environment variable TMPDIR already has value [/tmp/job_11388569/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node060
[2026-03-24 23:27:40] apptainer works
[2026-03-24 23:27:40] Set ATHENA_PROC_NUMBER=8
[2026-03-24 23:27:40] Set ATHENA_CORE_NUMBER=8
[2026-03-24 23:27:40] Starting ATLAS job with PandaID=7056961658
[2026-03-24 23:27:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11388569/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-25 01:59:09]  *** The last 200 lines of the pilot log: ***
[2026-03-25 01:59:09] 2026-03-25 00:58:29,126 | INFO     | extracted standard info from prmon json
[2026-03-25 01:59:09] 2026-03-25 00:58:29,126 | INFO     | extracted standard memory fields from prmon json
[2026-03-25 01:59:09] 2026-03-25 00:58:29,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-25 01:59:09] 2026-03-25 00:58:29,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-25 01:59:09] 2026-03-25 00:58:29,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-25 01:59:09] 2026-03-25 00:58:29,129 | INFO     | fitting pss+swap vs Time
[2026-03-25 01:59:09] 2026-03-25 00:58:29,129 | INFO     | sum of square deviations: 1005179777.0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,129 | INFO     | sum of deviations: 23306496371.000004
[2026-03-25 01:59:09] 2026-03-25 00:58:29,129 | INFO     | mean x: 1774395770.5
[2026-03-25 01:59:09] 2026-03-25 00:58:29,130 | INFO     | mean y: 2508555.527027027
[2026-03-25 01:59:09] 2026-03-25 00:58:29,130 | INFO     | intersect: -41139334458.16903
[2026-03-25 01:59:09] 2026-03-25 00:58:29,130 | INFO     | chi2: 1.2273473843361202
[2026-03-25 01:59:09] 2026-03-25 00:58:29,130 | INFO     | sum of square deviations: 906703512.0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,131 | INFO     | sum of deviations: 21525028886.0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,131 | INFO     | mean x: 1774395618.0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,131 | INFO     | mean y: 2505796.6363636362
[2026-03-25 01:59:09] 2026-03-25 00:58:29,131 | INFO     | intersect: -42121426036.81817
[2026-03-25 01:59:09] 2026-03-25 00:58:29,131 | INFO     | chi2: 1.2282976480359296
[2026-03-25 01:59:09] 2026-03-25 00:58:29,131 | INFO     | current chi2=1.2282976480359296 (change=-0.07742418421524007 %)
[2026-03-25 01:59:09] 2026-03-25 00:58:29,131 | INFO     | right removable region: 142
[2026-03-25 01:59:09] 2026-03-25 00:58:29,131 | INFO     | sum of square deviations: 906703512.0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,132 | INFO     | sum of deviations: 2990365423.9999995
[2026-03-25 01:59:09] 2026-03-25 00:58:29,132 | INFO     | mean x: 1774395923.0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,132 | INFO     | mean y: 2539575.881118881
[2026-03-25 01:59:09] 2026-03-25 00:58:29,132 | INFO     | intersect: -5849530198.197098
[2026-03-25 01:59:09] 2026-03-25 00:58:29,132 | INFO     | chi2: 0.02665855920142182
[2026-03-25 01:59:09] 2026-03-25 00:58:29,132 | INFO     | current chi2=0.02665855920142182 (change=97.82795323136313 %)
[2026-03-25 01:59:09] 2026-03-25 00:58:29,132 | INFO     | sum of square deviations: 814878534.5
[2026-03-25 01:59:09] 2026-03-25 00:58:29,133 | INFO     | sum of deviations: 595959507.9999998
[2026-03-25 01:59:09] 2026-03-25 00:58:29,133 | INFO     | mean x: 1774396075.5
[2026-03-25 01:59:09] 2026-03-25 00:58:29,133 | INFO     | mean y: 2543481.5507246377
[2026-03-25 01:59:09] 2026-03-25 00:58:29,133 | INFO     | intersect: -1295156933.15091
[2026-03-25 01:59:09] 2026-03-25 00:58:29,133 | INFO     | chi2: 0.0065062885295910314
[2026-03-25 01:59:09] 2026-03-25 00:58:29,133 | INFO     | current chi2=0.0065062885295910314 (change=75.59399785850383 %)
[2026-03-25 01:59:09] 2026-03-25 00:58:29,133 | INFO     | sum of square deviations: 729472282.0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,134 | INFO     | sum of deviations: 424805646.9999995
[2026-03-25 01:59:09] 2026-03-25 00:58:29,134 | INFO     | mean x: 1774396228.0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,134 | INFO     | mean y: 2543782.5563909775
[2026-03-25 01:59:09] 2026-03-25 00:58:29,134 | INFO     | intersect: -1030769691.1279986
[2026-03-25 01:59:09] 2026-03-25 00:58:29,134 | INFO     | chi2: 0.006450749865968379
[2026-03-25 01:59:09] 2026-03-25 00:58:29,134 | INFO     | current chi2=0.006450749865968379 (change=0.8536151351121136 %)
[2026-03-25 01:59:09] 2026-03-25 00:58:29,134 | INFO     | left removable region: 30
[2026-03-25 01:59:09] 2026-03-25 00:58:29,135 | INFO     | sum of square deviations: 435610028.0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,135 | INFO     | sum of deviations: 235650441.99999988
[2026-03-25 01:59:09] 2026-03-25 00:58:29,135 | INFO     | mean x: 1774396502.5
[2026-03-25 01:59:09] 2026-03-25 00:58:29,135 | INFO     | mean y: 2539804.285714286
[2026-03-25 01:59:09] 2026-03-25 00:58:29,135 | INFO     | intersect: -957349301.1537476
[2026-03-25 01:59:09] 2026-03-25 00:58:29,135 | INFO     | chi2: 0.0040770486736778685
[2026-03-25 01:59:09] 2026-03-25 00:58:29,135 | INFO     | current memory leak: 0.54 B/s (using 112 data points, chi2=0.00)
[2026-03-25 01:59:09] 2026-03-25 00:58:29,135 | INFO     | could have reported an average CPU frequency of 2349 MHz (9 samples)
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | ..............................
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | . Timing measurements:
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | . get job = 0 s
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | . initial setup = 3 s
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | . payload setup = 4 s
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | . stage-in = 0 s
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | . payload execution = 9019 s
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | . stage-out = 0 s
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | . log creation = 0 s
[2026-03-25 01:59:09] 2026-03-25 00:58:29,136 | INFO     | ..............................
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | 
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | job summary report
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | --------------------------------------------------
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | PanDA job id: 7056961658
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | task id: 49180110
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | errors: (none)
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | pilot state: finished 
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | transexitcode: 0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | exeerrorcode: 0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | exeerrordiag: 
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | exitcode: 0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | exitmsg: OK
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | cpuconsumptiontime: 65902 s
[2026-03-25 01:59:09] 2026-03-25 00:58:29,200 | INFO     | nevents: 400
[2026-03-25 01:59:09] 2026-03-25 00:58:29,201 | INFO     | neventsw: 0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,201 | INFO     | pid: 24002
[2026-03-25 01:59:09] 2026-03-25 00:58:29,201 | INFO     | pgrp: 24002
[2026-03-25 01:59:09] 2026-03-25 00:58:29,201 | INFO     | corecount: 8
[2026-03-25 01:59:09] 2026-03-25 00:58:29,201 | INFO     | event service: False
[2026-03-25 01:59:09] 2026-03-25 00:58:29,201 | INFO     | sizes: {0: 2280137, 1: 2280427, 11: 2280427, 9027: 2308864, 9028: 2317892, 9029: 2318334}
[2026-03-25 01:59:09] 2026-03-25 00:58:29,201 | INFO     | --------------------------------------------------
[2026-03-25 01:59:09] 2026-03-25 00:58:29,201 | INFO     | 
[2026-03-25 01:59:09] 2026-03-25 00:58:29,201 | INFO     | executing command: ls -lF /tmp/job_11388569/atlas/pilot/slots/0
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | job 7056961658 has completed (purged errors)
[2026-03-25 01:59:09] 2026-03-25 00:58:29,213 | INFO     | overall cleanup function is called
[2026-03-25 01:59:09] 2026-03-25 00:58:30,219 | INFO     | --- collectZombieJob: --- 10, [24002]
[2026-03-25 01:59:09] 2026-03-25 00:58:30,219 | INFO     | zombie collector waiting for pid 24002
[2026-03-25 01:59:09] 2026-03-25 00:58:30,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-25 01:59:09] 2026-03-25 00:58:30,220 | INFO     | collected zombie processes
[2026-03-25 01:59:09] 2026-03-25 00:58:30,220 | INFO     | will attempt to kill all subprocesses of pid=24002
[2026-03-25 01:59:09] 2026-03-25 00:58:30,339 | INFO     | process IDs to be killed: [24002] (in reverse order)
[2026-03-25 01:59:09] 2026-03-25 00:58:30,377 | WARNING  | found no corresponding commands to process id(s)
[2026-03-25 01:59:09] 2026-03-25 00:58:30,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-25 01:59:09] 2026-03-25 00:58:30,381 | INFO     | did not find any defunct processes belonging to 24002
[2026-03-25 01:59:09] 2026-03-25 00:58:30,385 | INFO     | did not find any defunct processes belonging to 24002
[2026-03-25 01:59:09] 2026-03-25 00:58:30,385 | INFO     | ready for new job
[2026-03-25 01:59:09] 2026-03-25 00:58:30,385 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-25 01:59:09] 2026-03-25 00:58:30,386 | INFO     | **************************************
[2026-03-25 01:59:09] 2026-03-25 00:58:30,386 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-25 01:59:09] 2026-03-25 00:58:30,386 | INFO     | **************************************
[2026-03-25 01:59:09] 2026-03-25 00:58:30,386 | INFO     | 
[2026-03-25 01:59:09] 2026-03-25 00:58:30,401 | INFO     | architecture information:
[2026-03-25 01:59:09] 2026-03-25 00:58:30,401 | INFO     | executing command: cat /etc/os-release
[2026-03-25 01:59:09] 2026-03-25 00:58:30,409 | INFO     | cat /etc/os-release:
[2026-03-25 01:59:09] NAME="CentOS Linux"
[2026-03-25 01:59:09] VERSION="7 (Core)"
[2026-03-25 01:59:09] ID="centos"
[2026-03-25 01:59:09] ID_LIKE="rhel fedora"
[2026-03-25 01:59:09] VERSION_ID="7"
[2026-03-25 01:59:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-25 01:59:09] ANSI_COLOR="0;31"
[2026-03-25 01:59:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-25 01:59:09] HOME_URL="https://www.centos.org/"
[2026-03-25 01:59:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-25 01:59:09] 
[2026-03-25 01:59:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-25 01:59:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-25 01:59:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-25 01:59:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-25 01:59:09] 
[2026-03-25 01:59:09] 2026-03-25 00:58:30,409 | INFO     | **************************************
[2026-03-25 01:59:09] 2026-03-25 00:58:30,912 | INFO     | executing command: df -mP /tmp/job_11388569/atlas/pilot/slots/0
[2026-03-25 01:59:09] 2026-03-25 00:58:30,919 | INFO     | sufficient remaining disk space (227830398976 B)
[2026-03-25 01:59:09] 2026-03-25 00:58:30,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-25 01:59:09] 2026-03-25 00:58:30,920 | INFO     | current server update state: UPDATING_FINAL
[2026-03-25 01:59:09] 2026-03-25 00:58:30,920 | INFO     | update_server=False
[2026-03-25 01:59:09] 2026-03-25 00:58:30,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-25 01:59:09] 2026-03-25 00:58:30,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:59:09] 2026-03-25 00:58:30,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-25 01:59:09] 2026-03-25 00:58:31,139 | INFO     | all payload control threads have been joined
[2026-03-25 01:59:09] 2026-03-25 00:58:31,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-25 01:59:09] 2026-03-25 00:58:31,638 | INFO     | all data control threads have been joined
[2026-03-25 01:59:09] 2026-03-25 00:58:31,925 | INFO     | [job] queue monitor thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:31,925 | INFO     | [job] retrieve thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:32,017 | INFO     | [job] validate thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:32,031 | WARNING  | process 24002 can no longer be monitored (due to stat problems) - aborting
[2026-03-25 01:59:09] 2026-03-25 00:58:32,127 | INFO     | using path: /tmp/job_11388569/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-25 01:59:09] 2026-03-25 00:58:32,144 | INFO     | [payload] control thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:32,240 | INFO     | number of running child processes to parent process 24002: 1
[2026-03-25 01:59:09] 2026-03-25 00:58:32,240 | INFO     | maximum number of monitored processes: 6
[2026-03-25 01:59:09] 2026-03-25 00:58:32,240 | INFO     | aborting job monitoring since job object (job id=7056961658) has expired
[2026-03-25 01:59:09] 2026-03-25 00:58:32,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-25 01:59:09] 2026-03-25 00:58:32,241 | INFO     | will abort loop
[2026-03-25 01:59:09] 2026-03-25 00:58:32,455 | INFO     | all job control threads have been joined
[2026-03-25 01:59:09] 2026-03-25 00:58:32,545 | INFO     | [job] create_data_payload thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:32,613 | INFO     | [payload] validate_pre thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:32,644 | INFO     | [data] control thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:32,678 | INFO     | [payload] execute_payloads thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:33,044 | INFO     | [payload] validate_post thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:33,048 | INFO     | [data] copytool_in thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:33,162 | INFO     | [data] copytool_out thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:33,192 | INFO     | [payload] failed_post thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:33,246 | INFO     | [job] job monitor thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:33,460 | INFO     | [job] control thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:34,926 | INFO     | [data] queue_monitor thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:58:41,778 | INFO     | job.realtimelogging is not enabled
[2026-03-25 01:59:09] 2026-03-25 00:58:42,783 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-25 01:59:09] 2026-03-25 00:59:01,461 | INFO     | PID=18179 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-25 01:59:09] 2026-03-25 00:59:01,461 | INFO     | found 0 job(s) in 20 queues
[2026-03-25 01:59:09] 2026-03-25 00:59:01,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-25 01:59:09] 2026-03-25 00:59:01,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-25 01:59:09] 2026-03-25 00:59:03,313 | INFO     | [monitor] cgroup control has ended
[2026-03-25 01:59:09] 2026-03-25 00:59:04,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-25 01:59:09] 2026-03-25 00:59:04,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-25 01:59:09] 2026-03-25 00:59:04,476 | INFO     | [monitor] control thread has ended
[2026-03-25 01:59:09] 2026-03-25 00:59:09,468 | INFO     | all workflow threads have been joined
[2026-03-25 01:59:09] 2026-03-25 00:59:09,468 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-25 01:59:09] 2026-03-25 00:59:09,468 | INFO     | traces error code: 0
[2026-03-25 01:59:09] 2026-03-25 00:59:09,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-25 01:59:09] 2026-03-25 00:59:09,532 [wrapper] ==== pilot stdout END ====
[2026-03-25 01:59:09] 2026-03-25 00:59:09,533 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-25 01:59:09] 2026-03-25 00:59:09,535 [wrapper] pilotpid: 18179
[2026-03-25 01:59:09] 2026-03-25 00:59:09,537 [wrapper] Pilot exit status: 0
[2026-03-25 01:59:09] 2026-03-25 00:59:09,542 [wrapper] pandaids: 7056961658
[2026-03-25 01:59:09] 2026-03-25 00:59:09,569 [wrapper] cleanup supervisor_pilot  1305 18180
[2026-03-25 01:59:09] 2026-03-25 00:59:09,570 [wrapper] Test setup, not cleaning
[2026-03-25 01:59:09] 2026-03-25 00:59:09,572 [wrapper] apfmon messages muted
[2026-03-25 01:59:09] 2026-03-25 00:59:09,573 [wrapper] ==== wrapper stdout END ====
[2026-03-25 01:59:09] 2026-03-25 00:59:09,575 [wrapper] ==== wrapper stderr END ====
[2026-03-25 01:59:09]  *** Error codes and diagnostics ***
[2026-03-25 01:59:09]     "exeErrorCode": 0,
[2026-03-25 01:59:09]     "exeErrorDiag": "",
[2026-03-25 01:59:09]     "pilotErrorCode": 0,
[2026-03-25 01:59:09]     "pilotErrorDiag": "",
[2026-03-25 01:59:09]  *** Listing of results directory ***
[2026-03-25 01:59:09] total 490776
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user    585013 Mar 16 16:57 pilot3.tar.gz
[2026-03-25 01:59:09] -rwx------ 1 mf493845 unix-user     36322 Mar 16 16:57 runpilot2-wrapper.sh
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user      5111 Mar 16 16:58 queuedata.json
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user       100 Mar 24 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-25 01:59:09] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 22:23 run_atlas
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user       105 Mar 24 22:23 job.xml
[2026-03-25 01:59:09] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:27 start_atlas.sh
[2026-03-25 01:59:09] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 23:27 shared
[2026-03-25 01:59:09] -rw-r--r-- 2 mf493845 unix-user    597533 Mar 24 23:27 input.tar.gz
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user      6388 Mar 24 23:27 init_data.xml
[2026-03-25 01:59:09] -rw-r--r-- 2 mf493845 unix-user 250847064 Mar 24 23:27 EVNT.49132718._000029.pool.root.1
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user         0 Mar 24 23:27 boinc_setup_complete
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user      8192 Mar 24 23:27 boinc_mmap_file
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user         0 Mar 24 23:27 boinc_lockfile
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user      2591 Mar 24 23:27 pandaJob.out
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user   1010852 Mar 24 23:27 agis_schedconf.cvmfs.json
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user   1511579 Mar 24 23:27 agis_ddmendpoints.agis.ALL.json
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user       420 Mar 24 23:27 workernode_map.json
[2026-03-25 01:59:09] drwx------ 5 mf493845 unix-user       440 Mar 24 23:27 pilot3
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user 244387667 Mar 25 01:57 HITS.49180110._000366.pool.root.1
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user        95 Mar 25 01:58 pilot_heartbeat.json
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user      1018 Mar 25 01:58 memory_monitor_summary.json
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user    392517 Mar 25 01:58 log.49180110._000366.job.log.tgz.1
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user      6305 Mar 25 01:58 heartbeat.json
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user      5360 Mar 25 01:59 pilotlog.txt
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user   1314904 Mar 25 01:59 log.49180110._000366.job.log.1
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user       357 Mar 25 01:59 output.list
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user       620 Mar 25 01:59 runtime_log
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user   1720320 Mar 25 01:59 result.tar.gz
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user       645 Mar 25 01:59 TPXLDmJVPM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZByLDm6srV2n.diag
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user      9219 Mar 25 01:59 runtime_log.err
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user     21531 Mar 25 01:59 stderr.txt
[2026-03-25 01:59:09] HITS file was successfully produced:
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user 244387667 Mar 25 01:57 shared/HITS.pool.root.1
[2026-03-25 01:59:09]  *** Contents of shared directory: ***
[2026-03-25 01:59:09] total 485908
[2026-03-25 01:59:09] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 23:27 start_atlas.sh
[2026-03-25 01:59:09] -rw-r--r-- 2 mf493845 unix-user    597533 Mar 24 23:27 input.tar.gz
[2026-03-25 01:59:09] -rw-r--r-- 2 mf493845 unix-user 250847064 Mar 24 23:27 ATLAS.root_0
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user 244387667 Mar 25 01:57 HITS.pool.root.1
[2026-03-25 01:59:09] -rw------- 1 mf493845 unix-user   1720320 Mar 25 01:59 result.tar.gz
01:59:10 (13489): run_atlas exited; CPU time 66096.144659
01:59:10 (13489): called boinc_finish(0)

</stderr_txt>
]]>

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