Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
22:09:00 (2822771): wrapper (7.7.26015): starting
22:09:00 (2822771): wrapper: running run_atlas (--nthreads 4)
[2026-03-27 22:09:00] Arguments: --nthreads 4
[2026-03-27 22:09:00] Threads: 4
[2026-03-27 22:09:00] Checking for CVMFS
[2026-03-27 22:09:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-27 22:09:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-27 22:09:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-27 22:09:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-27 22:09:00] 2.13.3.0 11582 57444 49032 157771 3 50 22509445 33554432 0 130560 0 27570459 99.971 2331709 310 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-03-27 22:09:00] CVMFS is ok
[2026-03-27 22:09:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-27 22:09:00] Checking for apptainer binary...
[2026-03-27 22:09:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-27 22:09:00] Running /usr/bin/apptainer --version
[2026-03-27 22:09:00] apptainer version 1.4.5
[2026-03-27 22:09:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-27 22:09:00] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-03-27 22:09:00] apptainer works
[2026-03-27 22:09:00] Set ATHENA_PROC_NUMBER=4
[2026-03-27 22:09:00] Set ATHENA_CORE_NUMBER=4
[2026-03-27 22:09:00] Starting ATLAS job with PandaID=7056909637
[2026-03-27 22:09:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-28 00:50:27]  *** The last 200 lines of the pilot log: ***
[2026-03-28 00:50:27] 2026-03-27 22:49:22,273 | INFO     | job 7056909637 has finished - writing final server update
[2026-03-28 00:50:27] 2026-03-27 22:49:22,273 | INFO     | total number of processed events: 400 (read)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,275 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7056909637/memory_monitor_summary.json (trf name=prmon)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,275 | INFO     | extracted standard info from prmon json
[2026-03-28 00:50:27] 2026-03-27 22:49:22,275 | INFO     | extracted standard memory fields from prmon json
[2026-03-28 00:50:27] 2026-03-27 22:49:22,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-28 00:50:27] 2026-03-27 22:49:22,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-28 00:50:27] 2026-03-27 22:49:22,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-28 00:50:27] 2026-03-27 22:49:22,277 | INFO     | fitting pss+swap vs Time
[2026-03-28 00:50:27] 2026-03-27 22:49:22,277 | INFO     | sum of square deviations: 1223016419.5
[2026-03-28 00:50:27] 2026-03-27 22:49:22,277 | INFO     | sum of deviations: -5154933923.5
[2026-03-28 00:50:27] 2026-03-27 22:49:22,277 | INFO     | mean x: 1774646954.5
[2026-03-28 00:50:27] 2026-03-27 22:49:22,277 | INFO     | mean y: 2369259.6265822784
[2026-03-28 00:50:27] 2026-03-27 22:49:22,277 | INFO     | intersect: 7482389676.464501
[2026-03-28 00:50:27] 2026-03-27 22:49:22,277 | INFO     | chi2: 2.025437709941962
[2026-03-28 00:50:27] 2026-03-27 22:49:22,277 | INFO     | sum of square deviations: 1110539892.0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | sum of deviations: 4090058357.0000005
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | mean x: 1774646802.0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | mean y: 2381475.862745098
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | intersect: -6533546711.43683
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | chi2: 1.3729379283854726
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | current chi2=1.3729379283854726 (change=32.21524801052442 %)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | sum of square deviations: 1005179777.0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | sum of deviations: 4002320318.4999995
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | mean x: 1774646649.5
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | mean y: 2381348.8445945946
[2026-03-28 00:50:27] 2026-03-27 22:49:22,278 | INFO     | intersect: -7063722154.202499
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | chi2: 1.3737923807172352
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | current chi2=1.3737923807172352 (change=-0.062235321356984376 %)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | right removable region: 147
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | sum of square deviations: 1110539892.0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | sum of deviations: -16973370840.999996
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | mean x: 1774647107.0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | mean y: 2384730.9411764704
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | intersect: 27125897966.266544
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | chi2: 0.8058245619452127
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | current chi2=0.8058245619452127 (change=60.214794165735995 %)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | sum of square deviations: 1005179777.0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | sum of deviations: -8332497611.5
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | mean x: 1774647259.5
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | mean y: 2372212.114864865
[2026-03-28 00:50:27] 2026-03-27 22:49:22,279 | INFO     | intersect: 14713416335.159105
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | chi2: 0.7086225150223997
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | current chi2=0.7086225150223997 (change=12.062432880945327 %)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | left removable region: 20
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | sum of square deviations: 635130048.0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | sum of deviations: 802002319.0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | mean x: 1774647229.0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | mean y: 2384845.196850394
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | intersect: -2238528173.3994985
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | chi2: 0.0009565565965289095
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | current memory leak: 1.26 B/s (using 127 data points, chi2=0.00)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | could have reported an average CPU frequency of 3036 MHz (9 samples)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | ..............................
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | . Timing measurements:
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | . get job = 0 s
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | . initial setup = 3 s
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | . payload setup = 3 s
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | . stage-in = 0 s
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | . payload execution = 9592 s
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | . stage-out = 0 s
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | . log creation = 0 s
[2026-03-28 00:50:27] 2026-03-27 22:49:22,280 | INFO     | ..............................
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | 
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | job summary report
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | --------------------------------------------------
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | PanDA job id: 7056909637
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | task id: 49176974
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | errors: (none)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | pilot state: finished 
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | transexitcode: 0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | exeerrorcode: 0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | exeerrordiag: 
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | exitcode: 0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | exitmsg: OK
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | cpuconsumptiontime: 37354 s
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | nevents: 400
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | neventsw: 0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | pid: 2831336
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | pgrp: 2831336
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | corecount: 4
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | event service: False
[2026-03-28 00:50:27] 2026-03-27 22:49:22,506 | INFO     | sizes: {0: 2280324, 11: 2280324, 9599: 2308964, 9600: 2318017, 9602: 2318219}
[2026-03-28 00:50:27] 2026-03-27 22:49:22,507 | INFO     | --------------------------------------------------
[2026-03-28 00:50:27] 2026-03-27 22:49:22,507 | INFO     | 
[2026-03-28 00:50:27] 2026-03-27 22:49:22,507 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,517 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,518 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-28 00:50:27] 2026-03-27 22:49:22,518 | INFO     | job 7056909637 has completed (purged errors)
[2026-03-28 00:50:27] 2026-03-27 22:49:22,518 | INFO     | overall cleanup function is called
[2026-03-28 00:50:27] 2026-03-27 22:49:23,520 | INFO     | --- collectZombieJob: --- 10, [2831336]
[2026-03-28 00:50:27] 2026-03-27 22:49:23,520 | INFO     | zombie collector waiting for pid 2831336
[2026-03-28 00:50:27] 2026-03-27 22:49:23,520 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-28 00:50:27] 2026-03-27 22:49:23,520 | INFO     | collected zombie processes
[2026-03-28 00:50:27] 2026-03-27 22:49:23,520 | INFO     | will attempt to kill all subprocesses of pid=2831336
[2026-03-28 00:50:27] 2026-03-27 22:49:23,619 | INFO     | process IDs to be killed: [2831336] (in reverse order)
[2026-03-28 00:50:27] 2026-03-27 22:49:23,648 | WARNING  | found no corresponding commands to process id(s)
[2026-03-28 00:50:27] 2026-03-27 22:49:23,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-28 00:50:27] 2026-03-27 22:49:23,651 | INFO     | did not find any defunct processes belonging to 2831336
[2026-03-28 00:50:27] 2026-03-27 22:49:23,653 | INFO     | did not find any defunct processes belonging to 2831336
[2026-03-28 00:50:27] 2026-03-27 22:49:23,653 | INFO     | ready for new job
[2026-03-28 00:50:27] 2026-03-27 22:49:23,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-28 00:50:27] 2026-03-27 22:49:23,654 | INFO     | **************************************
[2026-03-28 00:50:27] 2026-03-27 22:49:23,654 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-28 00:50:27] 2026-03-27 22:49:23,654 | INFO     | **************************************
[2026-03-28 00:50:27] 2026-03-27 22:49:23,654 | INFO     | 
[2026-03-28 00:50:27] 2026-03-27 22:49:23,655 | INFO     | architecture information:
[2026-03-28 00:50:27] 2026-03-27 22:49:23,655 | INFO     | executing command: cat /etc/os-release
[2026-03-28 00:50:27] 2026-03-27 22:49:23,661 | INFO     | cat /etc/os-release:
[2026-03-28 00:50:27] NAME="CentOS Linux"
[2026-03-28 00:50:27] VERSION="7 (Core)"
[2026-03-28 00:50:27] ID="centos"
[2026-03-28 00:50:27] ID_LIKE="rhel fedora"
[2026-03-28 00:50:27] VERSION_ID="7"
[2026-03-28 00:50:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-28 00:50:27] ANSI_COLOR="0;31"
[2026-03-28 00:50:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-28 00:50:27] HOME_URL="https://www.centos.org/"
[2026-03-28 00:50:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-28 00:50:27] 
[2026-03-28 00:50:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-28 00:50:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-28 00:50:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-28 00:50:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-28 00:50:27] 
[2026-03-28 00:50:27] 2026-03-27 22:49:23,661 | INFO     | **************************************
[2026-03-28 00:50:27] 2026-03-27 22:49:24,164 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-03-28 00:50:27] 2026-03-27 22:49:24,170 | INFO     | sufficient remaining disk space (64055410688 B)
[2026-03-28 00:50:27] 2026-03-27 22:49:24,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-28 00:50:27] 2026-03-27 22:49:24,170 | INFO     | current server update state: UPDATING_FINAL
[2026-03-28 00:50:27] 2026-03-27 22:49:24,170 | INFO     | update_server=False
[2026-03-28 00:50:27] 2026-03-27 22:49:24,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-28 00:50:27] 2026-03-27 22:49:24,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-28 00:50:27] 2026-03-27 22:49:24,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-28 00:50:27] 2026-03-27 22:49:24,244 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-28 00:50:27] 2026-03-27 22:49:24,244 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-28 00:50:27] 2026-03-27 22:49:24,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-28 00:50:27] 2026-03-27 22:49:24,244 | INFO     | will abort loop
[2026-03-28 00:50:27] 2026-03-27 22:49:24,311 | INFO     | all payload control threads have been joined
[2026-03-28 00:50:27] 2026-03-27 22:49:24,352 | INFO     | job.realtimelogging is not enabled
[2026-03-28 00:50:27] 2026-03-27 22:49:25,173 | INFO     | [job] retrieve thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:25,176 | INFO     | [job] queue monitor thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:25,216 | INFO     | all data control threads have been joined
[2026-03-28 00:50:27] 2026-03-27 22:49:25,237 | INFO     | [job] create_data_payload thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:25,249 | INFO     | [job] job monitor thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:25,316 | INFO     | [payload] control thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:25,333 | INFO     | [job] validate thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:25,357 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:25,412 | INFO     | [payload] validate_pre thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:25,443 | INFO     | [data] copytool_in thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:25,754 | INFO     | all job control threads have been joined
[2026-03-28 00:50:27] 2026-03-27 22:49:25,889 | INFO     | [payload] validate_post thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:26,171 | INFO     | [data] copytool_out thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:26,220 | INFO     | [data] control thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:26,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-28 00:50:27] 2026-03-27 22:49:26,481 | INFO     | [payload] execute_payloads thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:26,526 | INFO     | [payload] failed_post thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:26,759 | INFO     | [job] control thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:30,412 | INFO     | [data] queue_monitor thread has finished
[2026-03-28 00:50:27] 2026-03-27 22:49:53,803 | INFO     | PID=2826663 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-28 00:50:27] 2026-03-27 22:49:53,804 | INFO     | found 0 job(s) in 20 queues
[2026-03-28 00:50:27] 2026-03-27 22:49:53,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-28 00:50:27] 2026-03-27 22:49:53,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-28 00:50:27] 2026-03-27 22:50:21,155 | INFO     | [monitor] cgroup control has ended
[2026-03-28 00:50:27] 2026-03-27 22:50:22,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747748853568)>', '<ExcThread(monitor, started 139747263493888)>']
[2026-03-28 00:50:27] 2026-03-27 22:50:22,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-28 00:50:27] 2026-03-27 22:50:22,926 | INFO     | [monitor] control thread has ended
[2026-03-28 00:50:27] 2026-03-27 22:50:27,194 | INFO     | all workflow threads have been joined
[2026-03-28 00:50:27] 2026-03-27 22:50:27,194 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-28 00:50:27] 2026-03-27 22:50:27,195 | INFO     | traces error code: 0
[2026-03-28 00:50:27] 2026-03-27 22:50:27,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-28 00:50:27] 2026-03-27 22:50:27,242 [wrapper] ==== pilot stdout END ====
[2026-03-28 00:50:27] 2026-03-27 22:50:27,244 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-28 00:50:27] 2026-03-27 22:50:27,245 [wrapper] pilotpid: 2826663
[2026-03-28 00:50:27] 2026-03-27 22:50:27,246 [wrapper] Pilot exit status: 0
[2026-03-28 00:50:27] 2026-03-27 22:50:27,251 [wrapper] pandaids: 7056909637
[2026-03-28 00:50:27] 2026-03-27 22:50:27,275 [wrapper] cleanup supervisor_pilot 2936546 2826664
[2026-03-28 00:50:27] 2026-03-27 22:50:27,276 [wrapper] Test setup, not cleaning
[2026-03-28 00:50:27] 2026-03-27 22:50:27,278 [wrapper] apfmon messages muted
[2026-03-28 00:50:27] 2026-03-27 22:50:27,279 [wrapper] ==== wrapper stdout END ====
[2026-03-28 00:50:27] 2026-03-27 22:50:27,280 [wrapper] ==== wrapper stderr END ====
[2026-03-28 00:50:27]  *** Error codes and diagnostics ***
[2026-03-28 00:50:27]     "exeErrorCode": 0,
[2026-03-28 00:50:27]     "exeErrorDiag": "",
[2026-03-28 00:50:27]     "pilotErrorCode": 0,
[2026-03-28 00:50:27]     "pilotErrorDiag": "",
[2026-03-28 00:50:27]  *** Listing of results directory ***
[2026-03-28 00:50:27] total 484976
[2026-03-28 00:50:27] -rwx------ 1 ek ek     36322 Mar 16 15:17 runpilot2-wrapper.sh
[2026-03-28 00:50:27] -rw-r--r-- 1 ek ek    585013 Mar 16 15:19 pilot3.tar.gz
[2026-03-28 00:50:27] -rw-r--r-- 1 ek ek      5111 Mar 16 15:25 queuedata.json
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek       100 Mar 27 22:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-28 00:50:27] -rwxr-xr-x 1 ek ek      7986 Mar 27 22:09 run_atlas
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek       105 Mar 27 22:09 job.xml
[2026-03-28 00:50:27] -rw-r--r-- 2 ek ek 240034833 Mar 27 22:09 EVNT.49135955._000005.pool.root.1
[2026-03-28 00:50:27] drwxrwx--x 2 ek ek      4096 Mar 27 22:09 shared
[2026-03-28 00:50:27] -rw-r--r-- 2 ek ek    597550 Mar 27 22:09 input.tar.gz
[2026-03-28 00:50:27] -rw-r--r-- 2 ek ek     15845 Mar 27 22:09 start_atlas.sh
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek         0 Mar 27 22:09 boinc_setup_complete
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek      9842 Mar 27 22:09 init_data.xml
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek         0 Mar 27 22:09 boinc_lockfile
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek      2633 Mar 27 22:09 pandaJob.out
[2026-03-28 00:50:27] -rw------- 1 ek ek        50 Mar 27 22:09 setup.sh.local
[2026-03-28 00:50:27] -rw------- 1 ek ek   1004995 Mar 27 22:09 agis_schedconf.cvmfs.json
[2026-03-28 00:50:27] -rw------- 1 ek ek   1511579 Mar 27 22:09 agis_ddmendpoints.agis.ALL.json
[2026-03-28 00:50:27] -rw------- 1 ek ek       433 Mar 27 22:09 workernode_map.json
[2026-03-28 00:50:27] drwx------ 5 ek ek      4096 Mar 27 22:09 pilot3
[2026-03-28 00:50:27] -rw------- 1 ek ek 249227895 Mar 28 00:48 HITS.49176974._000115.pool.root.1
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek       529 Mar 28 00:49 boinc_task_state.xml
[2026-03-28 00:50:27] -rw------- 1 ek ek      1025 Mar 28 00:49 memory_monitor_summary.json
[2026-03-28 00:50:27] -rw------- 1 ek ek        95 Mar 28 00:49 pilot_heartbeat.json
[2026-03-28 00:50:27] -rw------- 1 ek ek    340983 Mar 28 00:49 log.49176974._000115.job.log.tgz.1
[2026-03-28 00:50:27] -rw------- 1 ek ek      6316 Mar 28 00:49 heartbeat.json
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek      8192 Mar 28 00:50 boinc_mmap_file
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek        27 Mar 28 00:50 wrapper_checkpoint.txt
[2026-03-28 00:50:27] -rw------- 1 ek ek      5002 Mar 28 00:50 pilotlog.txt
[2026-03-28 00:50:27] -rw------- 1 ek ek   1361965 Mar 28 00:50 log.49176974._000115.job.log.1
[2026-03-28 00:50:27] -rw------- 1 ek ek       357 Mar 28 00:50 output.list
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek       620 Mar 28 00:50 runtime_log
[2026-03-28 00:50:27] -rw------- 1 ek ek   1720320 Mar 28 00:50 result.tar.gz
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek      9501 Mar 28 00:50 runtime_log.err
[2026-03-28 00:50:27] -rw------- 1 ek ek       663 Mar 28 00:50 d1WMDmH0MM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwwwLDmIHLwWn.diag
[2026-03-28 00:50:27] -rw-rw-r-- 1 ek ek     20859 Mar 28 00:50 stderr.txt
[2026-03-28 00:50:27] HITS file was successfully produced:
[2026-03-28 00:50:27] -rw------- 1 ek ek 249227895 Mar 28 00:48 shared/HITS.pool.root.1
[2026-03-28 00:50:27]  *** Contents of shared directory: ***
[2026-03-28 00:50:27] total 480088
[2026-03-28 00:50:27] -rw-r--r-- 2 ek ek 240034833 Mar 27 22:09 ATLAS.root_0
[2026-03-28 00:50:27] -rw-r--r-- 2 ek ek    597550 Mar 27 22:09 input.tar.gz
[2026-03-28 00:50:27] -rw-r--r-- 2 ek ek     15845 Mar 27 22:09 start_atlas.sh
[2026-03-28 00:50:27] -rw------- 1 ek ek 249227895 Mar 28 00:48 HITS.pool.root.1
[2026-03-28 00:50:27] -rw------- 1 ek ek   1720320 Mar 28 00:50 result.tar.gz
00:50:28 (2822771): run_atlas exited; CPU time 37449.354539
00:50:28 (2822771): called boinc_finish(0)

</stderr_txt>
]]>

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