Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:14:35 (29906): wrapper (7.7.26015): starting
22:14:35 (29906): wrapper: running run_atlas (--nthreads 8)
[2026-03-24 22:14:35] Arguments: --nthreads 8
[2026-03-24 22:14:35] Threads: 8
[2026-03-24 22:14:35] Checking for CVMFS
[2026-03-24 22:14:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-24 22:14:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-24 22:14:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-24 22:14:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-24 22:14:35] 2.11.0.0 5736 29509 61992 157657 2 50 4043403 4096000 93 130560 0 2423723 99.416 2409876 270 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-24 22:14:35] CVMFS is ok
[2026-03-24 22:14:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-24 22:14:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-24 22:14:35] Further information can be found at the LHC@home message board.
[2026-03-24 22:14:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-24 22:14:35] Checking for apptainer binary...
[2026-03-24 22:14:35] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-24 22:14:35] apptainer is not installed, using version from CVMFS
[2026-03-24 22:14:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-24 22:14:35] WARNING: Environment variable TMPDIR already has value [/tmp/job_11387614/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node012
[2026-03-24 22:14:35] apptainer works
[2026-03-24 22:14:35] Set ATHENA_PROC_NUMBER=8
[2026-03-24 22:14:35] Set ATHENA_CORE_NUMBER=8
[2026-03-24 22:14:35] Starting ATLAS job with PandaID=7056947949
[2026-03-24 22:14:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11387614/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-24 23:40:56]  *** The last 200 lines of the pilot log: ***
[2026-03-24 23:40:56]  replicas=None
[2026-03-24 23:40:56]  scope=mc23_13p6TeV
[2026-03-24 23:40:56]  status=None
[2026-03-24 23:40:56]  status_code=0
[2026-03-24 23:40:56]  storage_token=
[2026-03-24 23:40:56]  surl=/tmp/job_11387614/atlas/pilot/slots/0/PanDA_Pilot-7056947949/log.49179056._000217.job.log.tgz.1
[2026-03-24 23:40:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/91/log.49179056._000217.job.log.tgz.1
[2026-03-24 23:40:56]  workdir=None
[2026-03-24 23:40:56] ]
[2026-03-24 23:40:56] 2026-03-24 22:40:01,010 | INFO     | transferring file log.49179056._000217.job.log.tgz.1 from /tmp/job_11387614/atlas/pilot/slots/0/PanDA_Pilot-7056947949/log.49179056._000217.job.log.tgz.1 to /tmp/j
[2026-03-24 23:40:56] 2026-03-24 22:40:01,010 | INFO     | executing command: /usr/bin/env mv /tmp/job_11387614/atlas/pilot/slots/0/PanDA_Pilot-7056947949/log.49179056._000217.job.log.tgz.1 /tmp/job_11387614/atlas/pilot/sl
[2026-03-24 23:40:56] 2026-03-24 22:40:01,018 | INFO     | adding to output.list: log.49179056._000217.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/91/log.49179056._000217.job.log.tg
[2026-03-24 23:40:56] 2026-03-24 22:40:01,018 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-24 23:40:56] 2026-03-24 22:40:01,018 | INFO     | summary of transferred files:
[2026-03-24 23:40:56] 2026-03-24 22:40:01,018 | INFO     |  -- lfn=log.49179056._000217.job.log.tgz.1, status_code=0, status=transferred
[2026-03-24 23:40:56] 2026-03-24 22:40:01,019 | INFO     | stage-out finished correctly
[2026-03-24 23:40:56] 2026-03-24 22:40:01,347 | INFO     | time since job start (5118s) is within the limit (345600.0s)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,114 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-24 23:40:56] 2026-03-24 22:40:03,162 | INFO     | job 7056947949 has state=finished
[2026-03-24 23:40:56] 2026-03-24 22:40:03,162 | INFO     | preparing for final server update for job 7056947949 in state='finished'
[2026-03-24 23:40:56] 2026-03-24 22:40:03,162 | INFO     | reading metadata from: /tmp/job_11387614/atlas/pilot/slots/0/PanDA_Pilot-7056947949/jobReport.json
[2026-03-24 23:40:56] 2026-03-24 22:40:03,164 | INFO     | added worker_node to metadata from /tmp/job_11387614/atlas/pilot/slots/0/workernode_map.json
[2026-03-24 23:40:56] 2026-03-24 22:40:03,164 | INFO     | this job has now completed (state=finished)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,164 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,164 | INFO     | log transfer has been attempted: DONE
[2026-03-24 23:40:56] 2026-03-24 22:40:03,164 | INFO     | job 7056947949 has finished - writing final server update
[2026-03-24 23:40:56] 2026-03-24 22:40:03,164 | INFO     | total number of processed events: 400 (read)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,182 | INFO     | using path: /tmp/job_11387614/atlas/pilot/slots/0/PanDA_Pilot-7056947949/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,182 | INFO     | extracted standard info from prmon json
[2026-03-24 23:40:56] 2026-03-24 22:40:03,182 | INFO     | extracted standard memory fields from prmon json
[2026-03-24 23:40:56] 2026-03-24 22:40:03,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-24 23:40:56] 2026-03-24 22:40:03,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-24 23:40:56] 2026-03-24 22:40:03,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-24 23:40:56] 2026-03-24 22:40:03,183 | INFO     | fitting pss+swap vs Time
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | sum of square deviations: 141539398.0
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | sum of deviations: -1216720884.0000002
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | mean x: 1774389524.0
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | mean y: 2551038.1818181816
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | intersect: 15255807874.851562
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | chi2: 0.0021005176937711465
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | current memory leak: -8.60 B/s (using 77 data points, chi2=0.00)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | could have reported an average CPU frequency of 2365 MHz (6 samples)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | ..............................
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | . Timing measurements:
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | . get job = 0 s
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | . initial setup = 2 s
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | . payload setup = 3 s
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | . stage-in = 0 s
[2026-03-24 23:40:56] 2026-03-24 22:40:03,184 | INFO     | . payload execution = 5098 s
[2026-03-24 23:40:56] 2026-03-24 22:40:03,185 | INFO     | . stage-out = 0 s
[2026-03-24 23:40:56] 2026-03-24 22:40:03,185 | INFO     | . log creation = 0 s
[2026-03-24 23:40:56] 2026-03-24 22:40:03,185 | INFO     | ..............................
[2026-03-24 23:40:56] 2026-03-24 22:40:03,352 | INFO     | time since job start (5120s) is within the limit (345600.0s)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | 
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | job summary report
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | --------------------------------------------------
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | PanDA job id: 7056947949
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | task id: 49179056
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | errors: (none)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | pilot state: finished 
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | transexitcode: 0
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | exeerrorcode: 0
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | exeerrordiag: 
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | exitcode: 0
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | exitmsg: OK
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | cpuconsumptiontime: 34324 s
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | nevents: 400
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | neventsw: 0
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | pid: 6171
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | pgrp: 6171
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | corecount: 8
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | event service: False
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | sizes: {0: 2279865, 1: 2280437, 11: 2280437, 5106: 2306941, 5107: 2315969, 5109: 2316347}
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | --------------------------------------------------
[2026-03-24 23:40:56] 2026-03-24 22:40:03,417 | INFO     | 
[2026-03-24 23:40:56] 2026-03-24 22:40:03,418 | INFO     | executing command: ls -lF /tmp/job_11387614/atlas/pilot/slots/0
[2026-03-24 23:40:56] 2026-03-24 22:40:03,427 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,427 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,427 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,427 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | job 7056947949 has completed (purged errors)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,428 | INFO     | overall cleanup function is called
[2026-03-24 23:40:56] 2026-03-24 22:40:03,672 | WARNING  | process 6171 can no longer be monitored (due to stat problems) - aborting
[2026-03-24 23:40:56] 2026-03-24 22:40:03,758 | INFO     | using path: /tmp/job_11387614/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,758 | INFO     | using path: /tmp/job_11387614/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,758 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-24 23:40:56] 2026-03-24 22:40:03,758 | WARNING  | maxPSS not found in memory monitor output
[2026-03-24 23:40:56] 2026-03-24 22:40:03,759 | INFO     | skipping file size check of payload stdout file (/tmp/job_11387614/atlas/pilot/slots/0/PanDA_Pilot-7056947949/payload.stdout) since it has not been created yet
[2026-03-24 23:40:56] 2026-03-24 22:40:03,759 | INFO     | executing command: df -mP /tmp/job_11387614/atlas/pilot/slots/0
[2026-03-24 23:40:56] 2026-03-24 22:40:03,765 | INFO     | sufficient remaining disk space (97769226240 B)
[2026-03-24 23:40:56] 2026-03-24 22:40:03,765 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-24 23:40:56] 2026-03-24 22:40:03,765 | INFO     | output file size check: skipping output file /tmp/job_11387614/atlas/pilot/slots/0/PanDA_Pilot-7056947949/HITS.49179056._000217.pool.root.1 since it does not exist
[2026-03-24 23:40:56] 2026-03-24 22:40:03,874 | INFO     | number of running child processes to parent process 6171: 1
[2026-03-24 23:40:56] 2026-03-24 22:40:03,874 | INFO     | maximum number of monitored processes: 6
[2026-03-24 23:40:56] 2026-03-24 22:40:03,874 | INFO     | aborting job monitoring since job object (job id=7056947949) has expired
[2026-03-24 23:40:56] 2026-03-24 22:40:04,434 | INFO     | --- collectZombieJob: --- 10, [6171]
[2026-03-24 23:40:56] 2026-03-24 22:40:04,434 | INFO     | zombie collector waiting for pid 6171
[2026-03-24 23:40:56] 2026-03-24 22:40:04,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-24 23:40:56] 2026-03-24 22:40:04,434 | INFO     | collected zombie processes
[2026-03-24 23:40:56] 2026-03-24 22:40:04,434 | INFO     | will attempt to kill all subprocesses of pid=6171
[2026-03-24 23:40:56] 2026-03-24 22:40:04,539 | INFO     | process IDs to be killed: [6171] (in reverse order)
[2026-03-24 23:40:56] 2026-03-24 22:40:04,578 | WARNING  | found no corresponding commands to process id(s)
[2026-03-24 23:40:56] 2026-03-24 22:40:04,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-24 23:40:56] 2026-03-24 22:40:04,582 | INFO     | did not find any defunct processes belonging to 6171
[2026-03-24 23:40:56] 2026-03-24 22:40:04,585 | INFO     | did not find any defunct processes belonging to 6171
[2026-03-24 23:40:56] 2026-03-24 22:40:04,585 | INFO     | ready for new job
[2026-03-24 23:40:56] 2026-03-24 22:40:04,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-24 23:40:56] 2026-03-24 22:40:04,586 | INFO     | **************************************
[2026-03-24 23:40:56] 2026-03-24 22:40:04,586 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-24 23:40:56] 2026-03-24 22:40:04,586 | INFO     | **************************************
[2026-03-24 23:40:56] 2026-03-24 22:40:04,586 | INFO     | 
[2026-03-24 23:40:56] 2026-03-24 22:40:04,600 | INFO     | architecture information:
[2026-03-24 23:40:56] 2026-03-24 22:40:04,600 | INFO     | executing command: cat /etc/os-release
[2026-03-24 23:40:56] 2026-03-24 22:40:04,605 | INFO     | cat /etc/os-release:
[2026-03-24 23:40:56] NAME="CentOS Linux"
[2026-03-24 23:40:56] VERSION="7 (Core)"
[2026-03-24 23:40:56] ID="centos"
[2026-03-24 23:40:56] ID_LIKE="rhel fedora"
[2026-03-24 23:40:56] VERSION_ID="7"
[2026-03-24 23:40:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-24 23:40:56] ANSI_COLOR="0;31"
[2026-03-24 23:40:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-24 23:40:56] HOME_URL="https://www.centos.org/"
[2026-03-24 23:40:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-24 23:40:56] 
[2026-03-24 23:40:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-24 23:40:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-24 23:40:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-24 23:40:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-24 23:40:56] 
[2026-03-24 23:40:56] 2026-03-24 22:40:04,605 | INFO     | **************************************
[2026-03-24 23:40:56] 2026-03-24 22:40:05,108 | INFO     | executing command: df -mP /tmp/job_11387614/atlas/pilot/slots/0
[2026-03-24 23:40:56] 2026-03-24 22:40:05,114 | INFO     | sufficient remaining disk space (97769226240 B)
[2026-03-24 23:40:56] 2026-03-24 22:40:05,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-24 23:40:56] 2026-03-24 22:40:05,114 | INFO     | current server update state: UPDATING_FINAL
[2026-03-24 23:40:56] 2026-03-24 22:40:05,114 | INFO     | update_server=False
[2026-03-24 23:40:56] 2026-03-24 22:40:05,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-24 23:40:56] 2026-03-24 22:40:05,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-24 23:40:56] 2026-03-24 22:40:05,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-24 23:40:56] 2026-03-24 22:40:05,115 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-24 23:40:56] 2026-03-24 22:40:05,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-24 23:40:56] 2026-03-24 22:40:05,115 | INFO     | aborting loop
[2026-03-24 23:40:56] 2026-03-24 22:40:05,115 | INFO     | found 0 job(s) in 20 queues
[2026-03-24 23:40:56] 2026-03-24 22:40:05,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-24 23:40:56] 2026-03-24 22:40:05,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-24 23:40:56] 2026-03-24 22:40:05,751 | INFO     | all data control threads have been joined
[2026-03-24 23:40:56] 2026-03-24 22:40:06,120 | INFO     | [job] retrieve thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,120 | INFO     | [job] job monitor thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,120 | INFO     | [job] queue monitor thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,211 | INFO     | all payload control threads have been joined
[2026-03-24 23:40:56] 2026-03-24 22:40:06,365 | INFO     | [job] validate thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,417 | INFO     | [data] copytool_in thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,427 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,444 | INFO     | [payload] validate_post thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,491 | INFO     | [payload] validate_pre thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,515 | INFO     | [job] create_data_payload thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-24 23:40:56] 2026-03-24 22:40:06,756 | INFO     | [data] control thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:06,811 | INFO     | all job control threads have been joined
[2026-03-24 23:40:56] 2026-03-24 22:40:07,144 | INFO     | [payload] failed_post thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:07,216 | INFO     | [payload] control thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:07,219 | INFO     | [payload] execute_payloads thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:07,816 | INFO     | [job] control thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:08,579 | INFO     | [data] copytool_out thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:09,120 | INFO     | [data] queue_monitor thread has finished
[2026-03-24 23:40:56] 2026-03-24 22:40:51,496 | INFO     | [monitor] cgroup control has ended
[2026-03-24 23:40:56] 2026-03-24 22:40:51,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-24 23:40:56] 2026-03-24 22:40:52,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-24 23:40:56] 2026-03-24 22:40:52,351 | INFO     | [monitor] control thread has ended
[2026-03-24 23:40:56] 2026-03-24 22:40:56,662 | INFO     | all workflow threads have been joined
[2026-03-24 23:40:56] 2026-03-24 22:40:56,662 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-24 23:40:56] 2026-03-24 22:40:56,663 | INFO     | traces error code: 0
[2026-03-24 23:40:56] 2026-03-24 22:40:56,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-24 23:40:56] 2026-03-24 22:40:56,715 [wrapper] ==== pilot stdout END ====
[2026-03-24 23:40:56] 2026-03-24 22:40:56,716 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-24 23:40:56] 2026-03-24 22:40:56,717 [wrapper] pilotpid: 1497
[2026-03-24 23:40:56] 2026-03-24 22:40:56,718 [wrapper] Pilot exit status: 0
[2026-03-24 23:40:56] 2026-03-24 22:40:56,722 [wrapper] pandaids: 7056947949
[2026-03-24 23:40:56] 2026-03-24 22:40:56,746 [wrapper] cleanup supervisor_pilot 15316 1498
[2026-03-24 23:40:56] 2026-03-24 22:40:56,747 [wrapper] Test setup, not cleaning
[2026-03-24 23:40:56] 2026-03-24 22:40:56,748 [wrapper] apfmon messages muted
[2026-03-24 23:40:56] 2026-03-24 22:40:56,749 [wrapper] ==== wrapper stdout END ====
[2026-03-24 23:40:56] 2026-03-24 22:40:56,750 [wrapper] ==== wrapper stderr END ====
[2026-03-24 23:40:56]  *** Error codes and diagnostics ***
[2026-03-24 23:40:56]     "exeErrorCode": 0,
[2026-03-24 23:40:56]     "exeErrorDiag": "",
[2026-03-24 23:40:56]     "pilotErrorCode": 0,
[2026-03-24 23:40:56]     "pilotErrorDiag": "",
[2026-03-24 23:40:56]  *** Listing of results directory ***
[2026-03-24 23:40:56] total 403460
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-24 23:40:56] -rwx------ 1 mf493845 unix-user     36322 Mar 16 16:06 runpilot2-wrapper.sh
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user      5111 Mar 16 16:09 queuedata.json
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user       100 Mar 24 21:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-24 23:40:56] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 24 21:19 run_atlas
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user       105 Mar 24 21:19 job.xml
[2026-03-24 23:40:56] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 22:14 start_atlas.sh
[2026-03-24 23:40:56] drwxrwx--x 2 mf493845 unix-user       100 Mar 24 22:14 shared
[2026-03-24 23:40:56] -rw-r--r-- 2 mf493845 unix-user    597542 Mar 24 22:14 input.tar.gz
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user      6390 Mar 24 22:14 init_data.xml
[2026-03-24 23:40:56] -rw-r--r-- 2 mf493845 unix-user 216926403 Mar 24 22:14 EVNT.49130490._000009.pool.root.1
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user         0 Mar 24 22:14 boinc_setup_complete
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user      8192 Mar 24 22:14 boinc_mmap_file
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user         0 Mar 24 22:14 boinc_lockfile
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user      2600 Mar 24 22:14 pandaJob.out
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user   1010852 Mar 24 22:14 agis_schedconf.cvmfs.json
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user   1511579 Mar 24 22:14 agis_ddmendpoints.agis.ALL.json
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user       416 Mar 24 22:14 workernode_map.json
[2026-03-24 23:40:56] drwx------ 5 mf493845 unix-user       440 Mar 24 22:14 pilot3
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user        95 Mar 24 23:39 pilot_heartbeat.json
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user 190085392 Mar 24 23:39 HITS.49179056._000217.pool.root.1
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user      1016 Mar 24 23:39 memory_monitor_summary.json
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user    337099 Mar 24 23:40 log.49179056._000217.job.log.tgz.1
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user      6315 Mar 24 23:40 heartbeat.json
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user      4561 Mar 24 23:40 pilotlog.txt
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user    770346 Mar 24 23:40 log.49179056._000217.job.log.1
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user       357 Mar 24 23:40 output.list
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user       620 Mar 24 23:40 runtime_log
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user   1126400 Mar 24 23:40 result.tar.gz
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user       645 Mar 24 23:40 uErKDm9hOM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvcuLDm6oY0Xn.diag
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user      9219 Mar 24 23:40 runtime_log.err
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user     22535 Mar 24 23:40 stderr.txt
[2026-03-24 23:40:56] HITS file was successfully produced:
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user 190085392 Mar 24 23:39 shared/HITS.pool.root.1
[2026-03-24 23:40:56]  *** Contents of shared directory: ***
[2026-03-24 23:40:56] total 399176
[2026-03-24 23:40:56] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 24 22:14 start_atlas.sh
[2026-03-24 23:40:56] -rw-r--r-- 2 mf493845 unix-user    597542 Mar 24 22:14 input.tar.gz
[2026-03-24 23:40:56] -rw-r--r-- 2 mf493845 unix-user 216926403 Mar 24 22:14 ATLAS.root_0
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user 190085392 Mar 24 23:39 HITS.pool.root.1
[2026-03-24 23:40:56] -rw------- 1 mf493845 unix-user   1126400 Mar 24 23:40 result.tar.gz
23:40:58 (29906): run_atlas exited; CPU time 34391.524685
23:40:58 (29906): called boinc_finish(0)

</stderr_txt>
]]>

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